RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 INO80B-WBP1J3KQ70 363 aa14.3□□□□□ -0.12
TOP3B-202ENST00000398793 RNF40O75150 1001 aa14.3□□□□□ -0.12
TOP3B-202ENST00000398793 PSAPP07602 524 aa14.3□□□□□ -0.12
TOP3B-202ENST00000398793 ARHGAP44Q17R89 818 aa14.3□□□□□ -0.12
TOP3B-202ENST00000398793 C11orf91Q3C1V1 193 aa14.3□□□□□ -0.12
TOP3B-202ENST00000398793 C1orf186Q6ZWK4 172 aa14.3□□□□□ -0.12
TOP3B-202ENST00000398793 PNKPQ96T60 521 aa14.3□□□□□ -0.12
TOP3B-202ENST00000398793 CHP1Q99653 195 aa14.3□□□□□ -0.12
TOP3B-202ENST00000398793 INO80BQ9C086 356 aaPredicted RBP14.3□□□□□ -0.12
TOP3B-202ENST00000398793 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.3□□□□□ -0.12
TOP3B-202ENST00000398793 L1RE1Q9UN81 338 aa14.3□□□□□ -0.12
TOP3B-202ENST00000398793 COL4A3BPQ9Y5P4 624 aa14.3□□□□□ -0.12
TOP3B-202ENST00000398793 FRMD3A2A2Y4 597 aa14.3□□□□□ -0.12
TOP3B-202ENST00000398793 TMCO5BA8MYB1 307 aa14.3□□□□□ -0.12
TOP3B-202ENST00000398793 HNRNPDLO14979 420 aaKnown RBP14.3□□□□□ -0.12
TOP3B-202ENST00000398793 PLEKP08567 350 aaPredicted RBP14.3□□□□□ -0.12
TOP3B-202ENST00000398793 C6orf222P0C671 652 aaPredicted RBP14.3□□□□□ -0.12
TOP3B-202ENST00000398793 RHOXF2BP0C7M4 288 aa14.3□□□□□ -0.12
TOP3B-202ENST00000398793 CYP27A1Q02318 531 aa14.3□□□□□ -0.12
TOP3B-202ENST00000398793 FGD4Q96M96 766 aa14.3□□□□□ -0.12
TOP3B-202ENST00000398793 PARK7Q99497 189 aaKnown RBP14.3□□□□□ -0.12
TOP3B-202ENST00000398793 RIT2Q99578 217 aa14.3□□□□□ -0.12
TOP3B-202ENST00000398793 RHOXF2Q9BQY4 288 aa14.3□□□□□ -0.12
TOP3B-202ENST00000398793 PLCD4Q9BRC7 762 aa14.3□□□□□ -0.12
TOP3B-202ENST00000398793 APOL6Q9BWW8 343 aa14.3□□□□□ -0.12
TOP3B-202ENST00000398793 FBXO40Q9UH90 709 aa14.3□□□□□ -0.12
TOP3B-202ENST00000398793 COL11A1P12107 1806 aaPredicted RBP14.29□□□□□ -0.12
TOP3B-202ENST00000398793 IKBKBO14920 756 aa14.29□□□□□ -0.12
TOP3B-202ENST00000398793 AKAP3O75969 853 aa14.29□□□□□ -0.12
TOP3B-202ENST00000398793 ABL1P00519 1130 aa14.29□□□□□ -0.12
TOP3B-202ENST00000398793 CTGFP29279 349 aa14.29□□□□□ -0.12
TOP3B-202ENST00000398793 HOXD13P35453 343 aa14.29□□□□□ -0.12
TOP3B-202ENST00000398793 HAUS6Q7Z4H7 955 aa14.29□□□□□ -0.12
TOP3B-202ENST00000398793 TRIML1Q8N9V2 468 aa14.29□□□□□ -0.12
TOP3B-202ENST00000398793 ANKZF1Q9H8Y5 726 aa14.29□□□□□ -0.12
TOP3B-202ENST00000398793 KMT5AQ9NQR1 393 aa14.29□□□□□ -0.12
TOP3B-202ENST00000398793 SETD4Q9NVD3 440 aa14.29□□□□□ -0.12
TOP3B-202ENST00000398793 GSTTP1A0A1W2PQM5 241 aa14.29□□□□□ -0.12
TOP3B-202ENST00000398793 MYO1FO00160 1098 aa14.29□□□□□ -0.12
TOP3B-202ENST00000398793 TBX3O15119 743 aa14.29□□□□□ -0.12
TOP3B-202ENST00000398793 FARP2O94887 1054 aaPredicted RBP14.29□□□□□ -0.12
TOP3B-202ENST00000398793 DLG4P78352 724 aa14.29□□□□□ -0.12
TOP3B-202ENST00000398793 MIS18BP1Q6P0N0 1132 aa14.29□□□□□ -0.12
TOP3B-202ENST00000398793 PHLDB2Q86SQ0 1253 aa14.29□□□□□ -0.12
TOP3B-202ENST00000398793 FMNL3Q8IVF7 1028 aa14.29□□□□□ -0.12
TOP3B-202ENST00000398793 ACRBPQ8NEB7 543 aa14.29□□□□□ -0.12
TOP3B-202ENST00000398793 MBOAT7Q96N66 472 aa14.29□□□□□ -0.12
TOP3B-202ENST00000398793 HINFPQ9BQA5 517 aa14.29□□□□□ -0.12
TOP3B-202ENST00000398793 PYM1Q9BRP8 204 aaKnown RBP14.29□□□□□ -0.12
TOP3B-202ENST00000398793 ACP6Q9NPH0 428 aa14.29□□□□□ -0.12
TOP3B-202ENST00000398793 CHORDC1Q9UHD1 332 aaPredicted RBP14.29□□□□□ -0.12
TOP3B-202ENST00000398793 ODF2LQ9ULJ1 636 aa14.29□□□□□ -0.12
TOP3B-202ENST00000398793 AKT3Q9Y243 479 aa14.29□□□□□ -0.12
TOP3B-202ENST00000398793 PPP2R2CQ9Y2T4 447 aa14.29□□□□□ -0.12
TOP3B-202ENST00000398793 PRUNE2Q8WUY3 3088 aa14.29□□□□□ -0.12
TOP3B-202ENST00000398793 ERCC5P28715 1186 aaPredicted RBP14.28□□□□□ -0.12
TOP3B-202ENST00000398793 GCLMP48507 274 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 KRT76Q01546 638 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 TDRD12Q587J7 1177 aaKnown RBP14.28□□□□□ -0.12
TOP3B-202ENST00000398793 SPECC1LQ69YQ0 1117 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 CACNA2D4Q7Z3S7 1137 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 PLEKHH3Q7Z736 793 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 HNRNPLLQ8WVV9 542 aaKnown RBP14.28□□□□□ -0.12
TOP3B-202ENST00000398793 MCM8Q9UJA3 840 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.28□□□□□ -0.12
TOP3B-202ENST00000398793 KLHL33A6NCF5 533 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 ANKRD63C9JTQ0 380 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 MYL3P08590 195 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 CTSHP09668 335 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 SLC9A1P19634 815 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 SCARA3Q6AZY7 606 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 THNSL1Q8IYQ7 743 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 MB21D1Q8N884 522 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 RNF149Q8NC42 400 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 POMGNT1Q8WZA1 660 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 TACO1Q9BSH4 297 aaKnown RBP14.28□□□□□ -0.12
TOP3B-202ENST00000398793 TRIM6Q9C030 488 aaPredicted RBP14.28□□□□□ -0.12
TOP3B-202ENST00000398793 GREB1LQ9C091 1923 aaPredicted RBP14.28□□□□□ -0.12
TOP3B-202ENST00000398793 TTC26A0AVF1 554 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 SPATA31C2B4DYI2 1134 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 ZNF18P17022 549 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 IRX1P78414 480 aaPredicted RBP14.28□□□□□ -0.12
TOP3B-202ENST00000398793 PLCB4Q15147 1175 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 TOGARAM2Q6ZUX3 1019 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 RRAGAQ7L523 313 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 SLC7A3Q8WY07 619 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 ATP6V0A1Q93050 837 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 PSMB7Q99436 277 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 PI4K2AQ9BTU6 479 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.28□□□□□ -0.12
TOP3B-202ENST00000398793 TARS2Q9BW92 718 aaKnown RBP14.28□□□□□ -0.12
TOP3B-202ENST00000398793 LARSQ9P2J5 1176 aaKnown RBP14.28□□□□□ -0.12
TOP3B-202ENST00000398793 SYNPO2Q9UMS6 1093 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 ADGRA3Q8IWK6 1321 aa14.28□□□□□ -0.12
TOP3B-202ENST00000398793 TFRCP02786 760 aaKnown RBP14.27□□□□□ -0.12
TOP3B-202ENST00000398793 NPTX2P47972 431 aa14.27□□□□□ -0.12
TOP3B-202ENST00000398793 FLT3LGP49771 235 aa14.27□□□□□ -0.12
TOP3B-202ENST00000398793 INHBEP58166 350 aa14.27□□□□□ -0.12
TOP3B-202ENST00000398793 POLR2FP61218 127 aaKnown RBP14.27□□□□□ -0.12
TOP3B-202ENST00000398793 ZBTB41Q5SVQ8 909 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms