RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 CYP2C9P11712 490 aa15.63■□□□□ 0.09
SKA1-202ENST00000398452 CCNE1P24864 410 aa15.63■□□□□ 0.09
SKA1-202ENST00000398452 ARL2P36404 184 aa15.63■□□□□ 0.09
SKA1-202ENST00000398452 NPTX2P47972 431 aa15.63■□□□□ 0.09
SKA1-202ENST00000398452 ACLYP53396 1101 aa15.63■□□□□ 0.09
SKA1-202ENST00000398452 STX17P56962 302 aa15.63■□□□□ 0.09
SKA1-202ENST00000398452 LRRC63Q05C16 580 aa15.63■□□□□ 0.09
SKA1-202ENST00000398452 UVSSAQ2YD98 709 aa15.63■□□□□ 0.09
SKA1-202ENST00000398452 NBPF20Q3BBV1 942 aa15.63■□□□□ 0.09
SKA1-202ENST00000398452 HAUS6Q7Z4H7 955 aa15.63■□□□□ 0.09
SKA1-202ENST00000398452 UBE2Q1Q7Z7E8 422 aa15.63■□□□□ 0.09
SKA1-202ENST00000398452 NELFCDQ8IXH7 590 aa15.63■□□□□ 0.09
SKA1-202ENST00000398452 ZNF710Q8N1W2 664 aa15.63■□□□□ 0.09
SKA1-202ENST00000398452 ENOX1Q8TC92 643 aaKnown RBP15.63■□□□□ 0.09
SKA1-202ENST00000398452 PRPF31Q8WWY3 499 aaKnown RBP15.63■□□□□ 0.09
SKA1-202ENST00000398452 P2RX5Q93086 422 aa15.63■□□□□ 0.09
SKA1-202ENST00000398452 PAK6Q9NQU5 681 aaPredicted RBP15.63■□□□□ 0.09
SKA1-202ENST00000398452 STARD7Q9NQZ5 370 aa15.63■□□□□ 0.09
SKA1-202ENST00000398452 HDAC6Q9UBN7 1215 aa15.63■□□□□ 0.09
SKA1-202ENST00000398452 SMIM35A0A1B0GVV1 85 aa15.62■□□□□ 0.09
SKA1-202ENST00000398452 ZBTB42B2RXF5 422 aa15.62■□□□□ 0.09
SKA1-202ENST00000398452 M0QZ92 97 aa15.62■□□□□ 0.09
SKA1-202ENST00000398452 DNM1LO00429 736 aa15.62■□□□□ 0.09
SKA1-202ENST00000398452 EVI5O60447 810 aa15.62■□□□□ 0.09
SKA1-202ENST00000398452 PRPF6O94906 941 aaKnown RBP15.62■□□□□ 0.09
SKA1-202ENST00000398452 MYBP10242 640 aa15.62■□□□□ 0.09
SKA1-202ENST00000398452 CDK11BP21127 795 aaKnown RBP15.62■□□□□ 0.09
SKA1-202ENST00000398452 PHKA2P46019 1235 aa15.62■□□□□ 0.09
SKA1-202ENST00000398452 MRE11P49959 708 aa15.62■□□□□ 0.09
SKA1-202ENST00000398452 CLCN3P51790 818 aa15.62■□□□□ 0.09
SKA1-202ENST00000398452 EFNA5P52803 228 aa15.62■□□□□ 0.09
SKA1-202ENST00000398452 NCKAP1LP55160 1127 aa15.62■□□□□ 0.09
SKA1-202ENST00000398452 PLCB2Q00722 1185 aa15.62■□□□□ 0.09
SKA1-202ENST00000398452 PTPN11Q06124 597 aaPredicted RBP15.62■□□□□ 0.09
SKA1-202ENST00000398452 KNOP1Q1ED39 458 aaKnown RBP15.62■□□□□ 0.09
SKA1-202ENST00000398452 TMEM132AQ24JP5 1023 aa15.62■□□□□ 0.09
SKA1-202ENST00000398452 TAF2Q6P1X5 1199 aa15.62■□□□□ 0.09
SKA1-202ENST00000398452 LUZP1Q86V48 1076 aa15.62■□□□□ 0.09
SKA1-202ENST00000398452 GAS2L3Q86XJ1 694 aa15.62■□□□□ 0.09
SKA1-202ENST00000398452 FAM114A1Q8IWE2 563 aa15.62■□□□□ 0.09
SKA1-202ENST00000398452 GOLGA5Q8TBA6 731 aa15.62■□□□□ 0.09
SKA1-202ENST00000398452 NOC3LQ8WTT2 800 aaKnown RBP15.62■□□□□ 0.09
SKA1-202ENST00000398452 BICD1Q96G01 975 aa15.62■□□□□ 0.09
SKA1-202ENST00000398452 NLRP4Q96MN2 994 aa15.62■□□□□ 0.09
SKA1-202ENST00000398452 CEP89Q96ST8 783 aa15.62■□□□□ 0.09
SKA1-202ENST00000398452 SEZ6LQ9BYH1 1024 aa15.62■□□□□ 0.09
SKA1-202ENST00000398452 FAM49AQ9H0Q0 323 aaPredicted RBP15.62■□□□□ 0.09
SKA1-202ENST00000398452 RBSNQ9H1K0 784 aa15.62■□□□□ 0.09
SKA1-202ENST00000398452 MAGEC2Q9UBF1 373 aaPredicted RBP15.62■□□□□ 0.09
SKA1-202ENST00000398452 PCDHA2Q9Y5H9 948 aa15.62■□□□□ 0.09
SKA1-202ENST00000398452 WDR81Q562E7 1941 aa15.62■□□□□ 0.09
SKA1-202ENST00000398452 A0A0U1RQG5 324 aaPredicted RBP15.61■□□□□ 0.09
SKA1-202ENST00000398452 DENND3A2RUS2 1198 aa15.61■□□□□ 0.09
SKA1-202ENST00000398452 K7ERI5 159 aa15.61■□□□□ 0.09
SKA1-202ENST00000398452 SRGAP2CP0DJJ0 459 aa15.61■□□□□ 0.09
SKA1-202ENST00000398452 GLRA2P23416 452 aa15.61■□□□□ 0.09
SKA1-202ENST00000398452 RPL13P26373 211 aaKnown RBP15.61■□□□□ 0.09
SKA1-202ENST00000398452 LAMTOR4Q0VGL1 99 aa15.61■□□□□ 0.09
SKA1-202ENST00000398452 ITGA7Q13683 1181 aa15.61■□□□□ 0.09
SKA1-202ENST00000398452 SPATA1Q5VX52 437 aa15.61■□□□□ 0.09
SKA1-202ENST00000398452 RNF149Q8NC42 400 aa15.61■□□□□ 0.09
SKA1-202ENST00000398452 ZNF507Q8TCN5 953 aa15.61■□□□□ 0.09
SKA1-202ENST00000398452 ASAP3Q8TDY4 903 aa15.61■□□□□ 0.09
SKA1-202ENST00000398452 SCFD1Q8WVM8 642 aa15.61■□□□□ 0.09
SKA1-202ENST00000398452 NLRP7Q8WX94 980 aa15.61■□□□□ 0.09
SKA1-202ENST00000398452 NTPCRQ9BSD7 190 aaKnown RBP15.61■□□□□ 0.09
SKA1-202ENST00000398452 ST6GALNAC4Q9H4F1 302 aa15.61■□□□□ 0.09
SKA1-202ENST00000398452 GRPEL1Q9HAV7 217 aa15.61■□□□□ 0.09
SKA1-202ENST00000398452 GTF2IRD1Q9UHL9 959 aa15.61■□□□□ 0.09
SKA1-202ENST00000398452 NR2E3Q9Y5X4 410 aa15.61■□□□□ 0.09
SKA1-202ENST00000398452 PDXKO00764 312 aa15.6■□□□□ 0.09
SKA1-202ENST00000398452 TPM2P07951 284 aa15.6■□□□□ 0.09
SKA1-202ENST00000398452 CAPN2P17655 700 aa15.6■□□□□ 0.09
SKA1-202ENST00000398452 FXR1P51114 621 aaKnown RBP eCLIP15.6■□□□□ 0.09
SKA1-202ENST00000398452 SNRPFP62306 86 aaKnown RBP15.6■□□□□ 0.09
SKA1-202ENST00000398452 GTF2BQ00403 316 aa15.6■□□□□ 0.09
SKA1-202ENST00000398452 HSP90AA2PQ14568 343 aaPredicted RBP15.6■□□□□ 0.09
SKA1-202ENST00000398452 BMT2Q1RMZ1 405 aa15.6■□□□□ 0.09
SKA1-202ENST00000398452 ZC2HC1CQ53FD0 456 aaPredicted RBP15.6■□□□□ 0.09
SKA1-202ENST00000398452 CCSAPQ6IQ19 270 aaPredicted RBP15.6■□□□□ 0.09
SKA1-202ENST00000398452 NECAB2Q7Z6G3 386 aa15.6■□□□□ 0.09
SKA1-202ENST00000398452 ZNF410Q86VK4 478 aa15.6■□□□□ 0.09
SKA1-202ENST00000398452 CREBRFQ8IUR6 639 aa15.6■□□□□ 0.09
SKA1-202ENST00000398452 NME8Q8N427 588 aa15.6■□□□□ 0.09
SKA1-202ENST00000398452 CSGALNACT2Q8N6G5 542 aa15.6■□□□□ 0.09
SKA1-202ENST00000398452 CRISPLD2Q9H0B8 497 aa15.6■□□□□ 0.09
SKA1-202ENST00000398452 GBP3Q9H0R5 595 aa15.6■□□□□ 0.09
SKA1-202ENST00000398452 TYW1Q9NV66 732 aaKnown RBP15.6■□□□□ 0.09
SKA1-202ENST00000398452 CGNQ9P2M7 1197 aaKnown RBP15.6■□□□□ 0.09
SKA1-202ENST00000398452 NFE2L3Q9Y4A8 694 aa15.6■□□□□ 0.09
SKA1-202ENST00000398452 ARID2Q68CP9 1835 aa15.59■□□□□ 0.09
SKA1-202ENST00000398452 MBLAC1A4D2B0 266 aaPredicted RBP15.59■□□□□ 0.09
SKA1-202ENST00000398452 INO80B-WBP1J3KQ70 363 aa15.59■□□□□ 0.09
SKA1-202ENST00000398452 SNPHO15079 494 aa15.59■□□□□ 0.09
SKA1-202ENST00000398452 CASP5P51878 434 aa15.59■□□□□ 0.09
SKA1-202ENST00000398452 FKBP3Q00688 224 aaKnown RBP15.59■□□□□ 0.09
SKA1-202ENST00000398452 POU5F1BQ06416 359 aa15.59■□□□□ 0.09
SKA1-202ENST00000398452 SPAG1Q07617 926 aa15.59■□□□□ 0.09
SKA1-202ENST00000398452 NCBP1Q09161 790 aaKnown RBP15.59■□□□□ 0.09
SKA1-202ENST00000398452 CAPSQ13938 189 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms