RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 DLG3Q92796 817 aa3.79□□□□□ -1.8
CD47-203ENST00000398258 USP7Q93009 1102 aa3.79□□□□□ -1.8
CD47-203ENST00000398258 MLST8Q9BVC4 326 aa3.79□□□□□ -1.8
CD47-203ENST00000398258 BOCQ9BWV1 1114 aa3.79□□□□□ -1.8
CD47-203ENST00000398258 ASPSCR1Q9BZE9 553 aa3.79□□□□□ -1.8
CD47-203ENST00000398258 SYNPO2LQ9H987 977 aa3.79□□□□□ -1.8
CD47-203ENST00000398258 EMC7Q9NPA0 242 aa3.79□□□□□ -1.8
CD47-203ENST00000398258 SLC5A4Q9NY91 659 aa3.79□□□□□ -1.8
CD47-203ENST00000398258 SRPK3Q9UPE1 567 aa3.79□□□□□ -1.8
CD47-203ENST00000398258 SLC12A8A0AV02 714 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 GRID2IPA4D2P6 1211 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 TMEM191CA6NGB0 347 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 TGM5O43548 720 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 CUTAO60888 179 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 CLASP2O75122 1294 aaKnown RBP3.78□□□□□ -1.8
CD47-203ENST00000398258 ID4P47928 161 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 EVA1CP58658 441 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 HGFACQ04756 655 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 MTMR1Q13613 665 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 TOB2Q14106 344 aaPredicted RBP3.78□□□□□ -1.8
CD47-203ENST00000398258 INAVAQ3KP66 663 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 ZMAT1Q5H9K5 638 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 FSTL4Q6MZW2 842 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 EP400NLQ6ZTU2 488 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 RHOUQ7L0Q8 258 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 NLGN4XQ8N0W4 816 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 NXPE1Q8N323 547 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 D2HGDHQ8N465 521 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 C2orf69Q8N8R5 385 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 ZDHHC5Q9C0B5 715 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 NRDE2Q9H7Z3 1164 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 RIC8BQ9NVN3 520 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 OXSMQ9NWU1 459 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 KLHL42Q9P2K6 505 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 PUF60Q9UHX1 559 aaKnown RBP3.78□□□□□ -1.8
CD47-203ENST00000398258 ZKSCAN5Q9Y2L8 839 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 THRAP3Q9Y2W1 955 aaKnown RBP3.78□□□□□ -1.8
CD47-203ENST00000398258 SH3BP1Q9Y3L3 701 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 NUB1Q9Y5A7 615 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 SPO11Q9Y5K1 396 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 B3GALT1Q9Y5Z6 326 aa3.78□□□□□ -1.8
CD47-203ENST00000398258 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.77□□□□□ -1.81
CD47-203ENST00000398258 FAM90A27PA6NNH2 459 aa3.77□□□□□ -1.81
CD47-203ENST00000398258 DVL2O14641 736 aa3.77□□□□□ -1.81
CD47-203ENST00000398258 ULK1O75385 1050 aa3.77□□□□□ -1.81
CD47-203ENST00000398258 S100BP04271 92 aaPredicted RBP3.77□□□□□ -1.81
CD47-203ENST00000398258 PTPN1P18031 435 aaKnown RBP3.77□□□□□ -1.81
CD47-203ENST00000398258 CLK3P49761 638 aaKnown RBP3.77□□□□□ -1.81
CD47-203ENST00000398258 SESN3P58005 492 aa3.77□□□□□ -1.81
CD47-203ENST00000398258 ERVK-21P61565 698 aa3.77□□□□□ -1.81
CD47-203ENST00000398258 KRT85P78386 507 aa3.77□□□□□ -1.81
CD47-203ENST00000398258 SMAD3P84022 425 aaKnown RBP3.77□□□□□ -1.81
CD47-203ENST00000398258 SAFB2Q14151 953 aaKnown RBP eCLIP3.77□□□□□ -1.81
CD47-203ENST00000398258 LRRC32Q14392 662 aa3.77□□□□□ -1.81
CD47-203ENST00000398258 SART3Q15020 963 aaKnown RBP3.77□□□□□ -1.81
CD47-203ENST00000398258 BTBD8Q5XKL5 378 aa3.77□□□□□ -1.81
CD47-203ENST00000398258 CHTF18Q8WVB6 975 aa3.77□□□□□ -1.81
CD47-203ENST00000398258 RIOX1Q9H6W3 641 aa3.77□□□□□ -1.81
CD47-203ENST00000398258 SPTLC3Q9NUV7 552 aa3.77□□□□□ -1.81
CD47-203ENST00000398258 THG1LQ9NWX6 298 aaKnown RBP3.77□□□□□ -1.81
CD47-203ENST00000398258 SPEF1Q9Y4P9 236 aa3.77□□□□□ -1.81
CD47-203ENST00000398258 ATP23Q9Y6H3 246 aa3.77□□□□□ -1.81
CD47-203ENST00000398258 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.76□□□□□ -1.81
CD47-203ENST00000398258 PRAMEF25A6NGN4 478 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 SCDO00767 359 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 GABRDO14764 452 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 KATNA1O75449 491 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 ALDH1L1O75891 902 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 KRT37O76014 449 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 PRKD3O94806 890 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 PARNO95453 639 aaKnown RBP3.76□□□□□ -1.81
CD47-203ENST00000398258 NR4A1P22736 598 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 SDHAP31040 664 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 ADCY8P40145 1251 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 KCNQ1P51787 676 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 KPNA1P52294 538 aaPredicted RBP3.76□□□□□ -1.81
CD47-203ENST00000398258 EPHB1P54762 984 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 IL2P60568 153 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 IL13RA1P78552 427 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 IRF9Q00978 393 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 SEC23AQ15436 765 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 TERF2Q15554 542 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 ATP13A4Q4VNC1 1196 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 ODR4Q5SWX8 454 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 SYDE2Q5VT97 1194 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 CC2D1AQ6P1N0 951 aaPredicted RBP3.76□□□□□ -1.81
CD47-203ENST00000398258 SYCE2Q6PIF2 218 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 USP30Q70CQ3 517 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 ADGRG3Q86Y34 549 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 CBARPQ8N350 705 aaPredicted RBP3.76□□□□□ -1.81
CD47-203ENST00000398258 OR14K1Q8NGZ2 314 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 SLC5A5Q92911 643 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 CAMKK2Q96RR4 588 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 ACSS2Q9NR19 701 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 ZNHIT2Q9UHR6 403 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 CDC42EP3Q9UKI2 254 aa3.76□□□□□ -1.81
CD47-203ENST00000398258 H7C1D1 291 aa3.75□□□□□ -1.81
CD47-203ENST00000398258 MARCH6O60337 910 aa3.75□□□□□ -1.81
CD47-203ENST00000398258 FAM20BO75063 409 aa3.75□□□□□ -1.81
CD47-203ENST00000398258 C4BPAP04003 597 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms