RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 PDXKO00764 312 aa21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 GTF2BQ00403 316 aa21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 ELF2Q15723 593 aa21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 MAP3K21Q5TCX8 1036 aa21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 IER5Q5VY09 327 aa21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 IRF2BP1Q8IU81 584 aa21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 CREBRFQ8IUR6 639 aa21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 LRRC71Q8N4P6 559 aa21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 TMEM161BQ8NDZ6 487 aa21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 KIFC3Q9BVG8 833 aa21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 SPC25Q9HBM1 224 aa21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 WBP1LQ9NX94 342 aa21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 TRAF3IP3Q9Y228 551 aa21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 TRIM17Q9Y577 477 aa21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 COL1A2P08123 1366 aa21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 CALUO43852 315 aaPredicted RBP21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 FGFR1OPO95684 399 aaKnown RBP21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 GLRA2P23416 452 aa21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 KLRC1P26715 233 aa21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 CHMP4BP1P59074 171 aa21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 FKBP3Q00688 224 aaKnown RBP21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 SPAG1Q07617 926 aa21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 PPFIA1Q13136 1202 aa21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 DRP2Q13474 957 aa21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 TCP11Q8WWU5 503 aa21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 UPF3AQ9H1J1 476 aaKnown RBP21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 TYW1Q9NV66 732 aaKnown RBP21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 FAM53CQ9NYF3 392 aa21.18■□□□□ 0.98
PDLIM2-204ENST00000397760 MYADML2A6NDP7 307 aa21.17■□□□□ 0.98
PDLIM2-204ENST00000397760 KCNJ18B7U540 433 aa21.17■□□□□ 0.98
PDLIM2-204ENST00000397760 MAGEB2O15479 319 aa21.17■□□□□ 0.98
PDLIM2-204ENST00000397760 C22orf31O95567 290 aa21.17■□□□□ 0.98
PDLIM2-204ENST00000397760 PGK1P00558 417 aa21.17■□□□□ 0.98
PDLIM2-204ENST00000397760 H2AFXP16104 143 aaPredicted RBP21.17■□□□□ 0.98
PDLIM2-204ENST00000397760 MKRN4PQ13434 485 aaPredicted RBP21.17■□□□□ 0.98
PDLIM2-204ENST00000397760 KCNJ12Q14500 433 aa21.17■□□□□ 0.98
PDLIM2-204ENST00000397760 PPP2R5AQ15172 486 aa21.17■□□□□ 0.98
PDLIM2-204ENST00000397760 GRIK4Q16099 956 aa21.17■□□□□ 0.98
PDLIM2-204ENST00000397760 KIAA0753Q2KHM9 967 aa21.17■□□□□ 0.98
PDLIM2-204ENST00000397760 EDRF1Q3B7T1 1238 aa21.17■□□□□ 0.98
PDLIM2-204ENST00000397760 FILIP1LQ4L180 1135 aa21.17■□□□□ 0.98
PDLIM2-204ENST00000397760 TCP11X2Q5H9J9 407 aa21.17■□□□□ 0.98
PDLIM2-204ENST00000397760 GNASQ5JWF2 1037 aa21.17■□□□□ 0.98
PDLIM2-204ENST00000397760 EFCAB12Q6NXP0 572 aa21.17■□□□□ 0.98
PDLIM2-204ENST00000397760 APTXQ7Z2E3 356 aaKnown RBP21.17■□□□□ 0.98
PDLIM2-204ENST00000397760 RETREG2Q8NC44 543 aa21.17■□□□□ 0.98
PDLIM2-204ENST00000397760 SLAIN1Q8ND83 568 aa21.17■□□□□ 0.98
PDLIM2-204ENST00000397760 ZBTB10Q96DT7 871 aa21.17■□□□□ 0.98
PDLIM2-204ENST00000397760 ACCSQ96QU6 501 aa21.17■□□□□ 0.98
PDLIM2-204ENST00000397760 TMEM206Q9H813 350 aa21.17■□□□□ 0.98
PDLIM2-204ENST00000397760 MAGEC2Q9UBF1 373 aaPredicted RBP21.17■□□□□ 0.98
PDLIM2-204ENST00000397760 ITIH6Q6UXX5 1313 aa21.16■□□□□ 0.98
PDLIM2-204ENST00000397760 AKR1B15C9JRZ8 316 aaPredicted RBP21.16■□□□□ 0.98
PDLIM2-204ENST00000397760 TGFB1I1O43294 461 aa21.16■□□□□ 0.98
PDLIM2-204ENST00000397760 PBX1P40424 430 aa21.16■□□□□ 0.98
PDLIM2-204ENST00000397760 NAMPTP43490 491 aa21.16■□□□□ 0.98
PDLIM2-204ENST00000397760 PSEN2P49810 448 aa21.16■□□□□ 0.98
PDLIM2-204ENST00000397760 MFSD10Q14728 455 aa21.16■□□□□ 0.98
PDLIM2-204ENST00000397760 LRRC55Q6ZSA7 311 aa21.16■□□□□ 0.98
PDLIM2-204ENST00000397760 FAM114A1Q8IWE2 563 aa21.16■□□□□ 0.98
PDLIM2-204ENST00000397760 SYCP3Q8IZU3 236 aa21.16■□□□□ 0.98
PDLIM2-204ENST00000397760 METTL13Q8N6R0 699 aa21.16■□□□□ 0.98
PDLIM2-204ENST00000397760 ANKRD20A12PQ8NF67 263 aa21.16■□□□□ 0.98
PDLIM2-204ENST00000397760 PRPF31Q8WWY3 499 aaKnown RBP21.16■□□□□ 0.98
PDLIM2-204ENST00000397760 PSPC1Q8WXF1 523 aaKnown RBP21.16■□□□□ 0.98
PDLIM2-204ENST00000397760 CCDC51Q96ER9 411 aa21.16■□□□□ 0.98
PDLIM2-204ENST00000397760 XPNPEP3Q9NQH7 507 aa21.16■□□□□ 0.98
PDLIM2-204ENST00000397760 ZMYM2Q9UBW7 1377 aa21.16■□□□□ 0.98
PDLIM2-204ENST00000397760 ADGRA3Q8IWK6 1321 aa21.16■□□□□ 0.98
PDLIM2-204ENST00000397760 DENND3A2RUS2 1198 aa21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 H0YCG3 227 aa21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 KPNA6O60684 536 aa21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 DNM2P50570 870 aa21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 GABPB1Q06547 395 aaPredicted RBP21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 FBXO38Q6PIJ6 1188 aa21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 HVCN1Q96D96 273 aa21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 GBP3Q9H0R5 595 aa21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 IKZF4Q9H2S9 585 aa21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 SUCLA2Q9P2R7 463 aaPredicted RBP21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 LIMA1Q9UHB6 759 aaKnown RBP21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 TBX20Q9UMR3 447 aa21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 RRN3P2A6NIE6 340 aa21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 LRRIQ4A6NIV6 560 aa21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 SPDYE4A6NLX3 237 aa21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 EFCAB8A8MWE9 144 aa21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 HAS3O00219 553 aa21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 INHAP05111 366 aa21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 EEF1GP26641 437 aaKnown RBP21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 GRK4P32298 578 aa21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 CLCN3P51790 818 aa21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 NKX3-2P78367 333 aa21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 PURAQ00577 322 aaKnown RBP21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 ADAM9Q13443 819 aa21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 MXD4Q14582 209 aaPredicted RBP21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 KRT31Q15323 416 aa21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 MTHFD1LQ6UB35 978 aa21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 HS2ST1Q7LGA3 356 aa21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 DEPTORQ8TB45 409 aa21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 CEP63Q96MT8 703 aa21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 KATNAL1Q9BW62 490 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms