RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 SYCP3Q8IZU3 236 aa30.2■■■□□ 2.42
CPNE1-203ENST00000397442 CNOT6LQ96LI5 555 aaKnown RBP30.2■■■□□ 2.42
CPNE1-203ENST00000397442 CLIC2O15247 247 aa30.19■■■□□ 2.42
CPNE1-203ENST00000397442 MSCO60682 206 aa30.19■■■□□ 2.42
CPNE1-203ENST00000397442 FGFR1OPO95684 399 aaKnown RBP30.19■■■□□ 2.42
CPNE1-203ENST00000397442 SCP2P22307 547 aa30.19■■■□□ 2.42
CPNE1-203ENST00000397442 UBASH3AP57075 661 aa30.19■■■□□ 2.42
CPNE1-203ENST00000397442 CDCA2Q69YH5 1023 aaPredicted RBP30.19■■■□□ 2.42
CPNE1-203ENST00000397442 NFRKBQ6P4R8 1299 aa30.19■■■□□ 2.42
CPNE1-203ENST00000397442 INTS13Q9NVM9 706 aa30.19■■■□□ 2.42
CPNE1-203ENST00000397442 TISP43B9A030 160 aa30.18■■■□□ 2.42
CPNE1-203ENST00000397442 ASGR1P07306 291 aa30.18■■■□□ 2.42
CPNE1-203ENST00000397442 CCDC173Q0VFZ6 552 aa30.18■■■□□ 2.42
CPNE1-203ENST00000397442 HS2ST1Q7LGA3 356 aa30.18■■■□□ 2.42
CPNE1-203ENST00000397442 FILIP1Q7Z7B0 1213 aa30.18■■■□□ 2.42
CPNE1-203ENST00000397442 FAM114A1Q8IWE2 563 aa30.18■■■□□ 2.42
CPNE1-203ENST00000397442 RNF149Q8NC42 400 aa30.18■■■□□ 2.42
CPNE1-203ENST00000397442 HDAC6Q9UBN7 1215 aa30.18■■■□□ 2.42
CPNE1-203ENST00000397442 A0A1B0GTH6 734 aa30.17■■■□□ 2.42
CPNE1-203ENST00000397442 ASAP2O43150 1006 aa30.17■■■□□ 2.42
CPNE1-203ENST00000397442 SRGAP2CP0DJJ0 459 aa30.17■■■□□ 2.42
CPNE1-203ENST00000397442 ABCD1P33897 745 aa30.17■■■□□ 2.42
CPNE1-203ENST00000397442 KIAA0319LQ8IZA0 1049 aa30.17■■■□□ 2.42
CPNE1-203ENST00000397442 GOLGA5Q8TBA6 731 aa30.17■■■□□ 2.42
CPNE1-203ENST00000397442 TMEM134Q9H6X4 195 aa30.17■■■□□ 2.42
CPNE1-203ENST00000397442 DMAC2Q9NW81 257 aa30.17■■■□□ 2.42
CPNE1-203ENST00000397442 TRIP12Q14669 1992 aaPredicted RBP30.17■■■□□ 2.42
CPNE1-203ENST00000397442 TMOD1P28289 359 aa30.17■■■□□ 2.42
CPNE1-203ENST00000397442 TMEM174Q8WUU8 243 aa30.17■■■□□ 2.42
CPNE1-203ENST00000397442 MAGEC2Q9UBF1 373 aaPredicted RBP30.17■■■□□ 2.42
CPNE1-203ENST00000397442 EXOC7Q9UPT5 735 aa30.17■■■□□ 2.42
CPNE1-203ENST00000397442 CETN3O15182 167 aa30.16■■■□□ 2.42
CPNE1-203ENST00000397442 SLC39A4Q6P5W5 647 aa30.16■■■□□ 2.42
CPNE1-203ENST00000397442 CREBRFQ8IUR6 639 aa30.16■■■□□ 2.42
CPNE1-203ENST00000397442 CTAGE1Q96RT6 745 aa30.16■■■□□ 2.42
CPNE1-203ENST00000397442 CCDC113Q9H0I3 377 aa30.16■■■□□ 2.42
CPNE1-203ENST00000397442 TAB2Q9NYJ8 693 aa30.16■■■□□ 2.42
CPNE1-203ENST00000397442 CGNQ9P2M7 1197 aaKnown RBP30.16■■■□□ 2.42
CPNE1-203ENST00000397442 MYCNP04198 464 aaPredicted RBP30.15■■■□□ 2.42
CPNE1-203ENST00000397442 RPL13P26373 211 aaKnown RBP30.15■■■□□ 2.42
CPNE1-203ENST00000397442 COPB1P53618 953 aaKnown RBP30.15■■■□□ 2.42
CPNE1-203ENST00000397442 ZNF200P98182 395 aaPredicted RBP30.15■■■□□ 2.42
CPNE1-203ENST00000397442 NBPF20Q3BBV1 942 aa30.15■■■□□ 2.42
CPNE1-203ENST00000397442 RNF180Q86T96 592 aa30.15■■■□□ 2.42
CPNE1-203ENST00000397442 SLC9A9Q8IVB4 645 aa30.15■■■□□ 2.42
CPNE1-203ENST00000397442 C12orf56Q8IXR9 622 aa30.15■■■□□ 2.42
CPNE1-203ENST00000397442 C7orf31Q8N865 590 aa30.15■■■□□ 2.42
CPNE1-203ENST00000397442 PCSK9Q8NBP7 692 aaKnown RBP30.15■■■□□ 2.42
CPNE1-203ENST00000397442 PHLPP2Q6ZVD8 1323 aa30.15■■■□□ 2.42
CPNE1-203ENST00000397442 ANKRD63C9JTQ0 380 aa30.14■■■□□ 2.42
CPNE1-203ENST00000397442 K7ERI5 159 aa30.14■■■□□ 2.42
CPNE1-203ENST00000397442 VTNP04004 478 aa30.14■■■□□ 2.42
CPNE1-203ENST00000397442 EDN1P05305 212 aa30.14■■■□□ 2.42
CPNE1-203ENST00000397442 CDC25BP30305 580 aa30.14■■■□□ 2.42
CPNE1-203ENST00000397442 EFNA5P52803 228 aa30.14■■■□□ 2.42
CPNE1-203ENST00000397442 MARSP56192 900 aaKnown RBP30.14■■■□□ 2.42
CPNE1-203ENST00000397442 SNRPFP62306 86 aaKnown RBP30.14■■■□□ 2.42
CPNE1-203ENST00000397442 POU5F1BQ06416 359 aa30.14■■■□□ 2.42
CPNE1-203ENST00000397442 TFDP1Q14186 410 aa30.14■■■□□ 2.42
CPNE1-203ENST00000397442 NR1I3Q14994 352 aa30.14■■■□□ 2.42
CPNE1-203ENST00000397442 ZNF668Q96K58 619 aaPredicted RBP30.14■■■□□ 2.42
CPNE1-203ENST00000397442 NLRP4Q96MN2 994 aa30.14■■■□□ 2.42
CPNE1-203ENST00000397442 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.14■■■□□ 2.426e-9■□□□□ 10.4
CPNE1-203ENST00000397442 AKT3Q9Y243 479 aa30.14■■■□□ 2.42
CPNE1-203ENST00000397442 SMIM35A0A1B0GVV1 85 aa30.14■■■□□ 2.41
CPNE1-203ENST00000397442 C17orf102A2RUQ5 167 aa30.14■■■□□ 2.41
CPNE1-203ENST00000397442 TREHO43280 583 aa30.14■■■□□ 2.41
CPNE1-203ENST00000397442 CBFA2T2O43439 604 aa30.14■■■□□ 2.41
CPNE1-203ENST00000397442 AKAP3O75969 853 aa30.14■■■□□ 2.41
CPNE1-203ENST00000397442 ADSSP30520 456 aa30.14■■■□□ 2.41
CPNE1-203ENST00000397442 CASP4P49662 377 aa30.14■■■□□ 2.41
CPNE1-203ENST00000397442 PTENP60484 403 aa30.14■■■□□ 2.41
CPNE1-203ENST00000397442 RUFY4Q6ZNE9 571 aa30.14■■■□□ 2.41
CPNE1-203ENST00000397442 ARHGAP30Q7Z6I6 1101 aaPredicted RBP30.14■■■□□ 2.41
CPNE1-203ENST00000397442 ANKRD20A12PQ8NF67 263 aa30.14■■■□□ 2.41
CPNE1-203ENST00000397442 TUBGCP2Q9BSJ2 902 aa30.14■■■□□ 2.41
CPNE1-203ENST00000397442 NFKBIZQ9BYH8 718 aa30.14■■■□□ 2.41
CPNE1-203ENST00000397442 UNC93B1Q9H1C4 597 aa30.14■■■□□ 2.41
CPNE1-203ENST00000397442 IFT122Q9HBG6 1241 aa30.14■■■□□ 2.41
CPNE1-203ENST00000397442 RTN4Q9NQC3 1192 aaKnown RBP30.14■■■□□ 2.41
CPNE1-203ENST00000397442 GNA14O95837 355 aa30.13■■■□□ 2.41
CPNE1-203ENST00000397442 PIGRP01833 764 aa30.13■■■□□ 2.41
CPNE1-203ENST00000397442 HSPA8P11142 646 aaKnown RBP30.13■■■□□ 2.41
CPNE1-203ENST00000397442 MYBPC2Q14324 1141 aa30.13■■■□□ 2.41
CPNE1-203ENST00000397442 MAP7D2Q96T17 732 aa30.13■■■□□ 2.41
CPNE1-203ENST00000397442 CBWD1Q9BRT8 395 aa30.13■■■□□ 2.41
CPNE1-203ENST00000397442 VPS16Q9H269 839 aa30.13■■■□□ 2.41
CPNE1-203ENST00000397442 GTF2IRD1Q9UHL9 959 aa30.13■■■□□ 2.41
CPNE1-203ENST00000397442 USP20Q9Y2K6 914 aa30.13■■■□□ 2.41
CPNE1-203ENST00000397442 GRIN2DO15399 1336 aa30.13■■■□□ 2.41
CPNE1-203ENST00000397442 CYP2C9P11712 490 aa30.12■■■□□ 2.41
CPNE1-203ENST00000397442 STRN3Q13033 797 aa30.12■■■□□ 2.41
CPNE1-203ENST00000397442 IFNLR1Q8IU57 520 aaPredicted RBP30.12■■■□□ 2.41
CPNE1-203ENST00000397442 C2orf40Q9H1Z8 148 aa30.12■■■□□ 2.41
CPNE1-203ENST00000397442 HNRNPDLO14979 420 aaKnown RBP30.11■■■□□ 2.41
CPNE1-203ENST00000397442 TEX33O43247 280 aa30.11■■■□□ 2.41
CPNE1-203ENST00000397442 SLC9C1Q4G0N8 1177 aa30.11■■■□□ 2.41
CPNE1-203ENST00000397442 MIIPQ5JXC2 388 aa30.11■■■□□ 2.41
CPNE1-203ENST00000397442 ZBTB8OSQ8IWT0 167 aa30.11■■■□□ 2.41
CPNE1-203ENST00000397442 MINDY3Q9H8M7 445 aa30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms