RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 PITPNM1O00562 1244 aa26.01■■□□□ 1.75
TSPAN4-203ENST00000397397 SELPP16109 830 aa26.01■■□□□ 1.75
TSPAN4-203ENST00000397397 CDCA2Q69YH5 1023 aaPredicted RBP26.01■■□□□ 1.75
TSPAN4-203ENST00000397397 HAUS6Q7Z4H7 955 aa26.01■■□□□ 1.75
TSPAN4-203ENST00000397397 TMEM161BQ8NDZ6 487 aa26.01■■□□□ 1.75
TSPAN4-203ENST00000397397 SIP14410 1827 aa26■■□□□ 1.75
TSPAN4-203ENST00000397397 UMODL1Q5DID0 1318 aa26■■□□□ 1.75
TSPAN4-203ENST00000397397 GCNT3O95395 438 aa26■■□□□ 1.75
TSPAN4-203ENST00000397397 LRRC8DQ7L1W4 858 aa26■■□□□ 1.75
TSPAN4-203ENST00000397397 ZNF720Q7Z2F6 126 aa26■■□□□ 1.75
TSPAN4-203ENST00000397397 IFNLR1Q8IU57 520 aaPredicted RBP26■■□□□ 1.75
TSPAN4-203ENST00000397397 NFKBIZQ9BYH8 718 aa26■■□□□ 1.75
TSPAN4-203ENST00000397397 FGFBP2Q9BYJ0 223 aa26■■□□□ 1.75
TSPAN4-203ENST00000397397 ARHGAP28Q9P2N2 729 aa26■■□□□ 1.75
TSPAN4-203ENST00000397397 DENND3A2RUS2 1198 aa25.99■■□□□ 1.75
TSPAN4-203ENST00000397397 H0YGN5 161 aa25.99■■□□□ 1.75
TSPAN4-203ENST00000397397 MYBP10242 640 aa25.99■■□□□ 1.75
TSPAN4-203ENST00000397397 DARSP14868 501 aaKnown RBP25.99■■□□□ 1.75
TSPAN4-203ENST00000397397 EFNA5P52803 228 aa25.99■■□□□ 1.75
TSPAN4-203ENST00000397397 STK4Q13043 487 aa25.99■■□□□ 1.75
TSPAN4-203ENST00000397397 TRAF7Q6Q0C0 670 aa25.99■■□□□ 1.75
TSPAN4-203ENST00000397397 SRGAP1Q7Z6B7 1085 aa25.99■■□□□ 1.75
TSPAN4-203ENST00000397397 C7orf61Q8IZ16 206 aa25.99■■□□□ 1.75
TSPAN4-203ENST00000397397 GLIS3Q8NEA6 775 aa25.99■■□□□ 1.75
TSPAN4-203ENST00000397397 GDAQ9Y2T3 454 aa25.99■■□□□ 1.75
TSPAN4-203ENST00000397397 TRIM43BA6NCK2 446 aa25.98■■□□□ 1.75
TSPAN4-203ENST00000397397 INO80B-WBP1J3KQ70 363 aa25.98■■□□□ 1.75
TSPAN4-203ENST00000397397 KIAA0355O15063 1070 aa25.98■■□□□ 1.75
TSPAN4-203ENST00000397397 CSDE1O75534 798 aaKnown RBP25.98■■□□□ 1.75
TSPAN4-203ENST00000397397 EIF4BP23588 611 aaKnown RBP25.98■■□□□ 1.75
TSPAN4-203ENST00000397397 CYP2C18P33260 490 aa25.98■■□□□ 1.75
TSPAN4-203ENST00000397397 CASP5P51878 434 aa25.98■■□□□ 1.75
TSPAN4-203ENST00000397397 MORC3Q14149 939 aa25.98■■□□□ 1.75
TSPAN4-203ENST00000397397 ZC2HC1CQ53FD0 456 aaPredicted RBP25.98■■□□□ 1.75
TSPAN4-203ENST00000397397 ZNF658Q5TYW1 1059 aaPredicted RBP25.98■■□□□ 1.75
TSPAN4-203ENST00000397397 STXBP4Q6ZWJ1 553 aa25.98■■□□□ 1.75
TSPAN4-203ENST00000397397 TRIML1Q8N9V2 468 aa25.98■■□□□ 1.75
TSPAN4-203ENST00000397397 KIAA0895Q8NCT3 520 aa25.98■■□□□ 1.75
TSPAN4-203ENST00000397397 TRIM43Q96BQ3 446 aaPredicted RBP25.98■■□□□ 1.75
TSPAN4-203ENST00000397397 INO80BQ9C086 356 aaPredicted RBP25.98■■□□□ 1.75
TSPAN4-203ENST00000397397 ST6GALNAC4Q9H4F1 302 aa25.98■■□□□ 1.75
TSPAN4-203ENST00000397397 TMEM134Q9H6X4 195 aa25.98■■□□□ 1.75
TSPAN4-203ENST00000397397 MINDY3Q9H8M7 445 aa25.98■■□□□ 1.75
TSPAN4-203ENST00000397397 PCDHB13Q9Y5F0 798 aa25.98■■□□□ 1.75
TSPAN4-203ENST00000397397 K7ERI5 159 aa25.97■■□□□ 1.75
TSPAN4-203ENST00000397397 LETM1O95202 739 aaPredicted RBP25.97■■□□□ 1.75
TSPAN4-203ENST00000397397 MBTD1Q05BQ5 628 aa25.97■■□□□ 1.75
TSPAN4-203ENST00000397397 TMEM40Q8WWA1 233 aa25.97■■□□□ 1.75
TSPAN4-203ENST00000397397 GTPBP4Q9BZE4 634 aaKnown RBP25.97■■□□□ 1.75
TSPAN4-203ENST00000397397 TANC1Q9C0D5 1861 aa25.97■■□□□ 1.75
TSPAN4-203ENST00000397397 PHLPP2Q6ZVD8 1323 aa25.97■■□□□ 1.75
TSPAN4-203ENST00000397397 EVI5O60447 810 aa25.97■■□□□ 1.75
TSPAN4-203ENST00000397397 IQCF3P0C7M6 154 aa25.97■■□□□ 1.75
TSPAN4-203ENST00000397397 SCP2P22307 547 aa25.97■■□□□ 1.75
TSPAN4-203ENST00000397397 CCL23P55773 120 aa25.97■■□□□ 1.75
TSPAN4-203ENST00000397397 GTF2BQ00403 316 aa25.97■■□□□ 1.75
TSPAN4-203ENST00000397397 ALCAMQ13740 583 aa25.97■■□□□ 1.75
TSPAN4-203ENST00000397397 MAPK6Q16659 721 aa25.97■■□□□ 1.75
TSPAN4-203ENST00000397397 FBXO47Q5MNV8 452 aa25.97■■□□□ 1.75
TSPAN4-203ENST00000397397 SMYD4Q8IYR2 804 aaPredicted RBP25.97■■□□□ 1.75
TSPAN4-203ENST00000397397 STRA6Q9BX79 667 aa25.97■■□□□ 1.75
TSPAN4-203ENST00000397397 CCDC113Q9H0I3 377 aa25.97■■□□□ 1.75
TSPAN4-203ENST00000397397 WNT8AQ9H1J5 351 aa25.97■■□□□ 1.75
TSPAN4-203ENST00000397397 PRKAG2Q9UGJ0 569 aa25.97■■□□□ 1.75
TSPAN4-203ENST00000397397 NOC2LQ9Y3T9 749 aaKnown RBP25.97■■□□□ 1.75
TSPAN4-203ENST00000397397 PPP1R37O75864 691 aa25.96■■□□□ 1.75
TSPAN4-203ENST00000397397 PRPF6O94906 941 aaKnown RBP25.96■■□□□ 1.75
TSPAN4-203ENST00000397397 TIMP1P01033 207 aa25.96■■□□□ 1.75
TSPAN4-203ENST00000397397 PRKCBP05771 671 aa25.96■■□□□ 1.75
TSPAN4-203ENST00000397397 GHRP10912 638 aa25.96■■□□□ 1.75
TSPAN4-203ENST00000397397 RAG1P15918 1043 aa25.96■■□□□ 1.75
TSPAN4-203ENST00000397397 FGFR4P22455 802 aa25.96■■□□□ 1.75
TSPAN4-203ENST00000397397 ABCD1P33897 745 aa25.96■■□□□ 1.75
TSPAN4-203ENST00000397397 STRN3Q13033 797 aa25.96■■□□□ 1.75
TSPAN4-203ENST00000397397 SASS6Q6UVJ0 657 aa25.96■■□□□ 1.75
TSPAN4-203ENST00000397397 EPM2AIP1Q7L775 607 aaPredicted RBP25.96■■□□□ 1.75
TSPAN4-203ENST00000397397 TAS1R3Q7RTX0 852 aa25.96■■□□□ 1.75
TSPAN4-203ENST00000397397 HVCN1Q96D96 273 aa25.96■■□□□ 1.75
TSPAN4-203ENST00000397397 PRMT7Q9NVM4 692 aaPredicted RBP25.96■■□□□ 1.75
TSPAN4-203ENST00000397397 TBX20Q9UMR3 447 aa25.96■■□□□ 1.75
TSPAN4-203ENST00000397397 EIF3DO15371 548 aaKnown RBP eCLIP25.95■■□□□ 1.74
TSPAN4-203ENST00000397397 RPS6KA5O75582 802 aa25.95■■□□□ 1.74
TSPAN4-203ENST00000397397 BMP6P22004 513 aa25.95■■□□□ 1.74
TSPAN4-203ENST00000397397 SFPQP23246 707 aaKnown RBP eCLIP25.95■■□□□ 1.742e-6■■■■□ 23.9
TSPAN4-203ENST00000397397 LPIN1Q14693 890 aa25.95■■□□□ 1.74
TSPAN4-203ENST00000397397 MBTPS1Q14703 1052 aa25.95■■□□□ 1.74
TSPAN4-203ENST00000397397 L1TD1Q5T7N2 865 aaKnown RBP25.95■■□□□ 1.74
TSPAN4-203ENST00000397397 SCLYQ96I15 445 aa25.95■■□□□ 1.74
TSPAN4-203ENST00000397397 OSBPL7Q9BZF2 842 aa25.95■■□□□ 1.74
TSPAN4-203ENST00000397397 FZD8Q9H461 694 aa25.95■■□□□ 1.74
TSPAN4-203ENST00000397397 MAPK8IP1Q9UQF2 711 aa25.95■■□□□ 1.74
TSPAN4-203ENST00000397397 SYCE3A1L190 88 aa25.94■■□□□ 1.74
TSPAN4-203ENST00000397397 NLRP12P59046 1061 aa25.94■■□□□ 1.74
TSPAN4-203ENST00000397397 ZSCAN23Q3MJ62 389 aa25.94■■□□□ 1.74
TSPAN4-203ENST00000397397 CATSPER4Q7RTX7 472 aa25.94■■□□□ 1.74
TSPAN4-203ENST00000397397 FAM228AQ86W67 206 aa25.94■■□□□ 1.74
TSPAN4-203ENST00000397397 MYOCDQ8IZQ8 938 aa25.94■■□□□ 1.74
TSPAN4-203ENST00000397397 ZNF507Q8TCN5 953 aa25.94■■□□□ 1.74
TSPAN4-203ENST00000397397 SCFD1Q8WVM8 642 aa25.94■■□□□ 1.74
TSPAN4-203ENST00000397397 KCNN1Q92952 543 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms