RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 ANKRD20A12PQ8NF67 263 aa13.92□□□□□ -0.18
LMCD1-202ENST00000397386 MAP7D2Q96T17 732 aa13.92□□□□□ -0.18
LMCD1-202ENST00000397386 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.92□□□□□ -0.18
LMCD1-202ENST00000397386 PAK6Q9NQU5 681 aaPredicted RBP13.92□□□□□ -0.18
LMCD1-202ENST00000397386 ADGRA3Q8IWK6 1321 aa13.92□□□□□ -0.18
LMCD1-202ENST00000397386 C17orf102A2RUQ5 167 aa13.91□□□□□ -0.18
LMCD1-202ENST00000397386 LRRIQ4A6NIV6 560 aa13.91□□□□□ -0.18
LMCD1-202ENST00000397386 K7ERI5 159 aa13.91□□□□□ -0.18
LMCD1-202ENST00000397386 PIGRP01833 764 aa13.91□□□□□ -0.18
LMCD1-202ENST00000397386 RPLP2P05387 115 aaKnown RBP13.91□□□□□ -0.18
LMCD1-202ENST00000397386 HSPA8P11142 646 aaKnown RBP13.91□□□□□ -0.18
LMCD1-202ENST00000397386 CLCN3P51790 818 aa13.91□□□□□ -0.18
LMCD1-202ENST00000397386 TCP11X2Q5H9J9 407 aa13.91□□□□□ -0.18
LMCD1-202ENST00000397386 CTU1Q7Z7A3 348 aaKnown RBP13.91□□□□□ -0.18
LMCD1-202ENST00000397386 FILIP1Q7Z7B0 1213 aa13.91□□□□□ -0.18
LMCD1-202ENST00000397386 KIAA0319LQ8IZA0 1049 aa13.91□□□□□ -0.18
LMCD1-202ENST00000397386 SH3TC2Q8TF17 1288 aa13.91□□□□□ -0.18
LMCD1-202ENST00000397386 MRFAP1L1Q96HT8 127 aa13.91□□□□□ -0.18
LMCD1-202ENST00000397386 TRIM5Q9C035 493 aa13.91□□□□□ -0.18
LMCD1-202ENST00000397386 LIMA1Q9UHB6 759 aaKnown RBP13.91□□□□□ -0.18
LMCD1-202ENST00000397386 KCNJ18B7U540 433 aa13.9□□□□□ -0.18
LMCD1-202ENST00000397386 CETN3O15182 167 aa13.9□□□□□ -0.18
LMCD1-202ENST00000397386 AP5Z1O43299 807 aa13.9□□□□□ -0.18
LMCD1-202ENST00000397386 CBFA2T2O43439 604 aa13.9□□□□□ -0.18
LMCD1-202ENST00000397386 NR3C1P04150 777 aa13.9□□□□□ -0.18
LMCD1-202ENST00000397386 TPM3P06753 285 aa13.9□□□□□ -0.18
LMCD1-202ENST00000397386 NR2F2P24468 414 aa13.9□□□□□ -0.18
LMCD1-202ENST00000397386 CTCFP49711 727 aaPredicted RBP13.9□□□□□ -0.18
LMCD1-202ENST00000397386 ACLYP53396 1101 aa13.9□□□□□ -0.18
LMCD1-202ENST00000397386 MARSP56192 900 aaKnown RBP13.9□□□□□ -0.18
LMCD1-202ENST00000397386 PTENP60484 403 aa13.9□□□□□ -0.18
LMCD1-202ENST00000397386 FANCCQ00597 558 aa13.9□□□□□ -0.18
LMCD1-202ENST00000397386 PLCB2Q00722 1185 aa13.9□□□□□ -0.18
LMCD1-202ENST00000397386 PTPN11Q06124 597 aaPredicted RBP13.9□□□□□ -0.18
LMCD1-202ENST00000397386 STRN3Q13033 797 aa13.9□□□□□ -0.18
LMCD1-202ENST00000397386 ADAM9Q13443 819 aa13.9□□□□□ -0.18
LMCD1-202ENST00000397386 KCNJ12Q14500 433 aa13.9□□□□□ -0.18
LMCD1-202ENST00000397386 TAF2Q6P1X5 1199 aa13.9□□□□□ -0.18
LMCD1-202ENST00000397386 ZNF410Q86VK4 478 aa13.9□□□□□ -0.18
LMCD1-202ENST00000397386 RHPN2Q8IUC4 686 aa13.9□□□□□ -0.18
LMCD1-202ENST00000397386 ZBTB8OSQ8IWT0 167 aa13.9□□□□□ -0.18
LMCD1-202ENST00000397386 RNF149Q8NC42 400 aa13.9□□□□□ -0.18
LMCD1-202ENST00000397386 MKNK1Q9BUB5 465 aa13.9□□□□□ -0.18
LMCD1-202ENST00000397386 KIFC3Q9BVG8 833 aa13.9□□□□□ -0.18
LMCD1-202ENST00000397386 SEZ6LQ9BYH1 1024 aa13.9□□□□□ -0.18
LMCD1-202ENST00000397386 AGPAT3Q9NRZ7 376 aa13.9□□□□□ -0.18
LMCD1-202ENST00000397386 MAGEC2Q9UBF1 373 aaPredicted RBP13.9□□□□□ -0.18
LMCD1-202ENST00000397386 HDAC6Q9UBN7 1215 aa13.9□□□□□ -0.18
LMCD1-202ENST00000397386 GTF2IRD1Q9UHL9 959 aa13.9□□□□□ -0.18
LMCD1-202ENST00000397386 SLC16A3O15427 465 aaKnown RBP13.9□□□□□ -0.19
LMCD1-202ENST00000397386 ADCY5O95622 1261 aa13.9□□□□□ -0.19
LMCD1-202ENST00000397386 SERPINC1P01008 464 aa13.9□□□□□ -0.19
LMCD1-202ENST00000397386 PHKA2P46019 1235 aa13.9□□□□□ -0.19
LMCD1-202ENST00000397386 ZNF75DP51815 510 aa13.9□□□□□ -0.19
LMCD1-202ENST00000397386 NBPF20Q3BBV1 942 aa13.9□□□□□ -0.19
LMCD1-202ENST00000397386 FBXO46Q6PJ61 603 aaPredicted RBP13.9□□□□□ -0.19
LMCD1-202ENST00000397386 TAS1R3Q7RTX0 852 aa13.9□□□□□ -0.19
LMCD1-202ENST00000397386 APTXQ7Z2E3 356 aaKnown RBP13.9□□□□□ -0.19
LMCD1-202ENST00000397386 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.9□□□□□ -0.19
LMCD1-202ENST00000397386 KSR1Q8IVT5 923 aa13.9□□□□□ -0.19
LMCD1-202ENST00000397386 NME8Q8N427 588 aa13.9□□□□□ -0.19
LMCD1-202ENST00000397386 PDLIM2Q96JY6 352 aa13.9□□□□□ -0.19
LMCD1-202ENST00000397386 CCDC113Q9H0I3 377 aa13.9□□□□□ -0.19
LMCD1-202ENST00000397386 DMAC2Q9NW81 257 aa13.9□□□□□ -0.19
LMCD1-202ENST00000397386 AKT3Q9Y243 479 aa13.9□□□□□ -0.19
LMCD1-202ENST00000397386 EVPLQ92817 2033 aa13.89□□□□□ -0.19
LMCD1-202ENST00000397386 KIAA0391O15091 583 aaKnown RBP13.89□□□□□ -0.19
LMCD1-202ENST00000397386 SRGAP2CP0DJJ0 459 aa13.89□□□□□ -0.19
LMCD1-202ENST00000397386 CYP2C9P11712 490 aa13.89□□□□□ -0.19
LMCD1-202ENST00000397386 PRKCSHP14314 528 aaPredicted RBP13.89□□□□□ -0.19
LMCD1-202ENST00000397386 CDC25BP30305 580 aa13.89□□□□□ -0.19
LMCD1-202ENST00000397386 UBASH3AP57075 661 aa13.89□□□□□ -0.19
LMCD1-202ENST00000397386 HSP90AA2PQ14568 343 aaPredicted RBP13.89□□□□□ -0.19
LMCD1-202ENST00000397386 PCBP1Q15365 356 aaKnown RBP eCLIP13.89□□□□□ -0.19
LMCD1-202ENST00000397386 MAPK6Q16659 721 aa13.89□□□□□ -0.19
LMCD1-202ENST00000397386 ZPBP2Q6X784 338 aa13.89□□□□□ -0.19
LMCD1-202ENST00000397386 GLT1D1Q96MS3 346 aa13.89□□□□□ -0.19
LMCD1-202ENST00000397386 UNC93B1Q9H1C4 597 aa13.89□□□□□ -0.19
LMCD1-202ENST00000397386 IFT122Q9HBG6 1241 aa13.89□□□□□ -0.19
LMCD1-202ENST00000397386 STYXL1Q9Y6J8 313 aa13.89□□□□□ -0.19
LMCD1-202ENST00000397386 SIP14410 1827 aa13.88□□□□□ -0.19
LMCD1-202ENST00000397386 A0A1B0GTH6 734 aa13.88□□□□□ -0.19
LMCD1-202ENST00000397386 HNRNPDLO14979 420 aaKnown RBP13.88□□□□□ -0.19
LMCD1-202ENST00000397386 MAPK13O15264 365 aa13.88□□□□□ -0.19
LMCD1-202ENST00000397386 TREHO43280 583 aa13.88□□□□□ -0.19
LMCD1-202ENST00000397386 GARTP22102 1010 aa13.88□□□□□ -0.19
LMCD1-202ENST00000397386 GPC3P51654 580 aa13.88□□□□□ -0.19
LMCD1-202ENST00000397386 CHMP4BP1P59074 171 aa13.88□□□□□ -0.19
LMCD1-202ENST00000397386 CCDC173Q0VFZ6 552 aa13.88□□□□□ -0.19
LMCD1-202ENST00000397386 HIC1Q14526 733 aa13.88□□□□□ -0.19
LMCD1-202ENST00000397386 KRT31Q15323 416 aa13.88□□□□□ -0.19
LMCD1-202ENST00000397386 FAM187BQ17R55 369 aa13.88□□□□□ -0.19
LMCD1-202ENST00000397386 FILIP1LQ4L180 1135 aa13.88□□□□□ -0.19
LMCD1-202ENST00000397386 HSP90AA4PQ58FG1 418 aa13.88□□□□□ -0.19
LMCD1-202ENST00000397386 SLFN12LQ6IEE8 588 aa13.88□□□□□ -0.19
LMCD1-202ENST00000397386 SRGAP1Q7Z6B7 1085 aa13.88□□□□□ -0.19
LMCD1-202ENST00000397386 FRMD5Q7Z6J6 570 aa13.88□□□□□ -0.19
LMCD1-202ENST00000397386 RPAINQ86UA6 219 aa13.88□□□□□ -0.19
LMCD1-202ENST00000397386 ZBTB10Q96DT7 871 aa13.88□□□□□ -0.19
LMCD1-202ENST00000397386 CNOT6LQ96LI5 555 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms