RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 CCDC88AQ3V6T2 1871 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 DPPA5A6NC42 116 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 PDXKO00764 312 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 KIAA0391O15091 583 aaKnown RBP9.89□□□□□ -0.83
CAPN3-206ENST00000397163 UBOX5O94941 541 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 GCNT3O95395 438 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 TMEM253P0C7T8 217 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 ATP4AP20648 1035 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 FGFR4P22455 802 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 RFC4P35249 363 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 DHX34Q14147 1143 aaKnown RBP9.89□□□□□ -0.83
CAPN3-206ENST00000397163 GIT2Q14161 759 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 TAF11Q15544 211 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 TTBK2Q6IQ55 1244 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 ZDHHC24Q6UX98 284 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 CRELD2Q6UXH1 353 aaPredicted RBP9.89□□□□□ -0.83
CAPN3-206ENST00000397163 COL23A1Q86Y22 540 aaPredicted RBP9.89□□□□□ -0.83
CAPN3-206ENST00000397163 ADGRF4Q8IZF3 695 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 C18orf8Q96DM3 657 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 TSC22D3Q99576 134 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 REEP2Q9BRK0 252 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 STMN4Q9H169 189 aaPredicted RBP9.89□□□□□ -0.83
CAPN3-206ENST00000397163 IGSF9BQ9UPX0 1349 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 IGF2BP3O00425 579 aaKnown RBP eCLIP9.88□□□□□ -0.83
CAPN3-206ENST00000397163 RASGRF2O14827 1237 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 PPP1R11O60927 126 aaPredicted RBP9.88□□□□□ -0.83
CAPN3-206ENST00000397163 SOX5P35711 763 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 KCNQ4P56696 695 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 TRAF1Q13077 416 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 TBC1D25Q3MII6 688 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 ANKRD20A2Q5SQ80 823 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 ANKRD20A1Q5TYW2 823 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 ANKRD20A3Q5VUR7 823 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 AADACL2Q6P093 401 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 CROCCP2Q86T23 111 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 CCDC25Q86WR0 208 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 CCHCR1Q8TD31 782 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 ARHGEF26Q96DR7 871 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 SETDB2Q96T68 719 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 LBHD1Q9BQE6 289 aaPredicted RBP9.88□□□□□ -0.83
CAPN3-206ENST00000397163 PAPOLBQ9NRJ5 636 aaKnown RBP9.88□□□□□ -0.83
CAPN3-206ENST00000397163 MTMR4Q9NYA4 1195 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 DBR1Q9UK59 544 aaKnown RBP9.88□□□□□ -0.83
CAPN3-206ENST00000397163 DNM3Q9UQ16 869 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 TMEM110-MUSTN1A8MSY1 372 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 USP17L15C9J2P7 530 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 USP17L13C9JLJ4 530 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 USP17L11C9JVI0 530 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 USP17L18D6R9N7 530 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 USP17L22D6RA61 530 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 USP17L17D6RBQ6 530 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 USP17L19D6RCP7 530 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 USP17L20D6RJB6 530 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 ATP8B3O60423 1300 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 KRT16P08779 473 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 NEFHP12036 1026 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 TNFAIP3P21580 790 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 HOXD13P35453 343 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 PAPOLAP51003 745 aaKnown RBP9.88□□□□□ -0.83
CAPN3-206ENST00000397163 PDE6CP51160 858 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 PSMC6P62333 389 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 PPATQ06203 517 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 USP17L24Q0WX57 530 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 RIPK1Q13546 671 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 LAMB3Q13751 1172 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 DRAP1Q14919 205 aaPredicted RBP9.88□□□□□ -0.83
CAPN3-206ENST00000397163 LRRC14Q15048 493 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 UBAP2Q5T6F2 1119 aaKnown RBP9.88□□□□□ -0.83
CAPN3-206ENST00000397163 PPP1R18Q6NYC8 613 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 USP17L6PQ6QN14 398 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 FAM196AQ6ZSG2 479 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 TAOK1Q7L7X3 1001 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 SLC51AQ86UW1 340 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 ALG3Q92685 438 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 MXD3Q9BW11 206 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 NYXQ9GZU5 481 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 ECT2Q9H8V3 914 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 TYW1Q9NV66 732 aaKnown RBP9.88□□□□□ -0.83
CAPN3-206ENST00000397163 DNAJC12Q9UKB3 198 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 RTCBQ9Y3I0 505 aaKnown RBP9.88□□□□□ -0.83
CAPN3-206ENST00000397163 NCANO14594 1321 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 RPTORQ8N122 1335 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 RAD21O60216 631 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 TBCAO75347 108 aaKnown RBP9.88□□□□□ -0.83
CAPN3-206ENST00000397163 NQO1P15559 274 aaKnown RBP9.88□□□□□ -0.83
CAPN3-206ENST00000397163 CLK2P49760 499 aaKnown RBP9.88□□□□□ -0.83
CAPN3-206ENST00000397163 RNASELQ05823 741 aaKnown RBP9.88□□□□□ -0.83
CAPN3-206ENST00000397163 CATSPER3Q86XQ3 398 aa9.88□□□□□ -0.83
CAPN3-206ENST00000397163 NAP1L4Q99733 375 aaKnown RBP9.88□□□□□ -0.83
CAPN3-206ENST00000397163 ZNF831Q5JPB2 1677 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 RSPH10B2B2RC85 870 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 USP17L10C9JJH3 530 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 SNX3O60493 162 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 RSPH10BP0C881 870 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 PLCG2P16885 1265 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 RPL21P46778 160 aaKnown RBP9.87□□□□□ -0.83
CAPN3-206ENST00000397163 DRG2P55039 364 aaKnown RBP9.87□□□□□ -0.83
CAPN3-206ENST00000397163 MXRA7P84157 204 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 ZNF543Q08ER8 600 aa9.87□□□□□ -0.83
CAPN3-206ENST00000397163 DPP8Q6V1X1 898 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms