RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 ZNF623O75123 536 aa16.87■□□□□ 0.29
SEC13-206ENST00000397102 OFD1O75665 1012 aa16.87■□□□□ 0.29
SEC13-206ENST00000397102 RFX1P22670 979 aa16.87■□□□□ 0.29
SEC13-206ENST00000397102 CIITAP33076 1130 aa16.87■□□□□ 0.29
SEC13-206ENST00000397102 DRP2Q13474 957 aa16.87■□□□□ 0.29
SEC13-206ENST00000397102 PUM1Q14671 1186 aaKnown RBP eCLIP16.87■□□□□ 0.29
SEC13-206ENST00000397102 NECTIN1Q15223 517 aa16.87■□□□□ 0.29
SEC13-206ENST00000397102 TARBP2Q15633 366 aaKnown RBP16.87■□□□□ 0.29
SEC13-206ENST00000397102 LONRF3Q496Y0 759 aa16.87■□□□□ 0.29
SEC13-206ENST00000397102 ZC3H14Q6PJT7 736 aaKnown RBP16.87■□□□□ 0.29
SEC13-206ENST00000397102 RHOBTB2Q9BYZ6 727 aa16.87■□□□□ 0.29
SEC13-206ENST00000397102 GBP3Q9H0R5 595 aa16.87■□□□□ 0.29
SEC13-206ENST00000397102 PIN4Q9Y237 131 aaKnown RBP16.87■□□□□ 0.29
SEC13-206ENST00000397102 R4GN57 208 aa16.87■□□□□ 0.29
SEC13-206ENST00000397102 DOCK8Q8NF50 2099 aa16.87■□□□□ 0.29
SEC13-206ENST00000397102 A0A087WZ62 844 aa16.86■□□□□ 0.29
SEC13-206ENST00000397102 B4GALT3O60512 393 aa16.86■□□□□ 0.29
SEC13-206ENST00000397102 LILRB3O75022 631 aa16.86■□□□□ 0.29
SEC13-206ENST00000397102 SSBP05455 408 aaKnown RBP eCLIP16.86■□□□□ 0.29
SEC13-206ENST00000397102 GBP2P32456 591 aaPredicted RBP16.86■□□□□ 0.29
SEC13-206ENST00000397102 UGCGQ16739 394 aa16.86■□□□□ 0.29
SEC13-206ENST00000397102 PFKFB3Q16875 520 aaPredicted RBP16.86■□□□□ 0.29
SEC13-206ENST00000397102 CYP26C1Q6V0L0 522 aa16.86■□□□□ 0.29
SEC13-206ENST00000397102 REXO1Q8N1G1 1221 aaKnown RBP16.86■□□□□ 0.29
SEC13-206ENST00000397102 RSAD2Q8WXG1 361 aa16.86■□□□□ 0.29
SEC13-206ENST00000397102 STAMQ92783 540 aa16.86■□□□□ 0.29
SEC13-206ENST00000397102 LENG9Q96B70 501 aa16.86■□□□□ 0.29
SEC13-206ENST00000397102 FDXACB1Q9BRP7 624 aaPredicted RBP16.86■□□□□ 0.29
SEC13-206ENST00000397102 INO80BQ9C086 356 aaPredicted RBP16.86■□□□□ 0.29
SEC13-206ENST00000397102 ZMYND12Q9H0C1 365 aa16.86■□□□□ 0.29
SEC13-206ENST00000397102 TBC1D17Q9HA65 648 aa16.86■□□□□ 0.29
SEC13-206ENST00000397102 WDR6Q9NNW5 1121 aaKnown RBP16.86■□□□□ 0.29
SEC13-206ENST00000397102 MAN1C1Q9NR34 630 aa16.86■□□□□ 0.29
SEC13-206ENST00000397102 MRPL17Q9NRX2 175 aaKnown RBP16.86■□□□□ 0.29
SEC13-206ENST00000397102 EPS15L1Q9UBC2 864 aa16.86■□□□□ 0.29
SEC13-206ENST00000397102 BRPF3Q9ULD4 1205 aa16.86■□□□□ 0.29
SEC13-206ENST00000397102 GOLGA8AA7E2F4 631 aa16.85■□□□□ 0.29
SEC13-206ENST00000397102 GOLGA8BA8MQT2 603 aa16.85■□□□□ 0.29
SEC13-206ENST00000397102 ADAMTS3O15072 1205 aa16.85■□□□□ 0.29
SEC13-206ENST00000397102 SRFP11831 508 aa16.85■□□□□ 0.29
SEC13-206ENST00000397102 SFNP31947 248 aa16.85■□□□□ 0.29
SEC13-206ENST00000397102 JAK3P52333 1124 aa16.85■□□□□ 0.29
SEC13-206ENST00000397102 ZNF410Q86VK4 478 aa16.85■□□□□ 0.29
SEC13-206ENST00000397102 ZNF280BQ86YH2 543 aa16.85■□□□□ 0.29
SEC13-206ENST00000397102 SLC44A3Q8N4M1 653 aa16.85■□□□□ 0.29
SEC13-206ENST00000397102 URGCPQ8TCY9 931 aa16.85■□□□□ 0.29
SEC13-206ENST00000397102 RIN2Q8WYP3 895 aaPredicted RBP16.85■□□□□ 0.29
SEC13-206ENST00000397102 NXPE3Q969Y0 559 aa16.85■□□□□ 0.29
SEC13-206ENST00000397102 PGBD4Q96DM1 585 aa16.85■□□□□ 0.29
SEC13-206ENST00000397102 C6orf50Q9HD87 102 aa16.85■□□□□ 0.29
SEC13-206ENST00000397102 FAM217BQ9NTX9 383 aaPredicted RBP16.85■□□□□ 0.29
SEC13-206ENST00000397102 DPP7Q9UHL4 492 aa16.85■□□□□ 0.29
SEC13-206ENST00000397102 CA14Q9ULX7 337 aa16.85■□□□□ 0.29
SEC13-206ENST00000397102 CLUHO75153 1309 aa16.85■□□□□ 0.29
SEC13-206ENST00000397102 OTOGLQ3ZCN5 2332 aa16.84■□□□□ 0.29
SEC13-206ENST00000397102 IGKV6-21A0A0C4DH24 114 aa16.84■□□□□ 0.29
SEC13-206ENST00000397102 CCDC195A0A1B0GUA6 201 aa16.84■□□□□ 0.29
SEC13-206ENST00000397102 DDHD2O94830 711 aa16.84■□□□□ 0.29
SEC13-206ENST00000397102 CDC27P30260 824 aa16.84■□□□□ 0.29
SEC13-206ENST00000397102 DNM2P50570 870 aa16.84■□□□□ 0.29
SEC13-206ENST00000397102 PHLDB3Q6NSJ2 640 aa16.84■□□□□ 0.29
SEC13-206ENST00000397102 ELMSAN1Q6PJG2 1045 aa16.84■□□□□ 0.29
SEC13-206ENST00000397102 CCDC12Q8WUD4 166 aaPredicted RBP16.84■□□□□ 0.29
SEC13-206ENST00000397102 RUBCNQ92622 972 aa16.84■□□□□ 0.29
SEC13-206ENST00000397102 CEP89Q96ST8 783 aa16.84■□□□□ 0.29
SEC13-206ENST00000397102 RIT2Q99578 217 aa16.84■□□□□ 0.29
SEC13-206ENST00000397102 HINFPQ9BQA5 517 aa16.84■□□□□ 0.29
SEC13-206ENST00000397102 TMEM175Q9BSA9 504 aa16.84■□□□□ 0.29
SEC13-206ENST00000397102 NIFKQ9BYG3 293 aaKnown RBP16.84■□□□□ 0.29
SEC13-206ENST00000397102 DLL3Q9NYJ7 618 aa16.84■□□□□ 0.29
SEC13-206ENST00000397102 SEPT9Q9UHD8 586 aaPredicted RBP16.84■□□□□ 0.29
SEC13-206ENST00000397102 SSX2IPQ9Y2D8 614 aa16.84■□□□□ 0.29
SEC13-206ENST00000397102 MTCL1Q9Y4B5 1905 aaKnown RBP16.84■□□□□ 0.29
SEC13-206ENST00000397102 DNAH14Q0VDD8 3507 aa16.83■□□□□ 0.29
SEC13-206ENST00000397102 INPPL1O15357 1258 aa16.83■□□□□ 0.28
SEC13-206ENST00000397102 MSH4O15457 936 aa16.83■□□□□ 0.28
SEC13-206ENST00000397102 CHMP2AO43633 222 aa16.83■□□□□ 0.28
SEC13-206ENST00000397102 GAS7O60861 476 aa16.83■□□□□ 0.28
SEC13-206ENST00000397102 SOD2P04179 222 aa16.83■□□□□ 0.28
SEC13-206ENST00000397102 ALDH2P05091 517 aa16.83■□□□□ 0.28
SEC13-206ENST00000397102 URODP06132 367 aa16.83■□□□□ 0.28
SEC13-206ENST00000397102 ADH1AP07327 375 aa16.83■□□□□ 0.28
SEC13-206ENST00000397102 SP9P0CG40 484 aa16.83■□□□□ 0.28
SEC13-206ENST00000397102 GNA11P29992 359 aa16.83■□□□□ 0.28
SEC13-206ENST00000397102 RCAN1P53805 252 aa16.83■□□□□ 0.28
SEC13-206ENST00000397102 EXOSC10Q01780 885 aaKnown RBP16.83■□□□□ 0.28
SEC13-206ENST00000397102 MTERF2Q49AM1 385 aa16.83■□□□□ 0.28
SEC13-206ENST00000397102 AGMOQ6ZNB7 445 aa16.83■□□□□ 0.28
SEC13-206ENST00000397102 CATSPER4Q7RTX7 472 aa16.83■□□□□ 0.28
SEC13-206ENST00000397102 TCEANC2Q96MN5 208 aa16.83■□□□□ 0.28
SEC13-206ENST00000397102 FAM193BQ96PV7 902 aaPredicted RBP16.83■□□□□ 0.28
SEC13-206ENST00000397102 MYADMQ96S97 322 aa16.83■□□□□ 0.28
SEC13-206ENST00000397102 ESYT1Q9BSJ8 1104 aa16.83■□□□□ 0.28
SEC13-206ENST00000397102 HERC2P3Q9BVR0 1158 aa16.83■□□□□ 0.28
SEC13-206ENST00000397102 DLGAP2Q9P1A6 1054 aa16.83■□□□□ 0.28
SEC13-206ENST00000397102 KANSL3Q9P2N6 904 aa16.83■□□□□ 0.28
SEC13-206ENST00000397102 FAN1Q9Y2M0 1017 aa16.83■□□□□ 0.28
SEC13-206ENST00000397102 DMXL1Q9Y485 3027 aa16.82■□□□□ 0.28
SEC13-206ENST00000397102 CNTNAP2Q9UHC6 1331 aa16.82■□□□□ 0.28
SEC13-206ENST00000397102 KLF18A0A0U1RQI7 1052 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms