RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 SIX1Q15475 284 aaPredicted RBP15.07■□□□□ 0
NUP98-204ENST00000397004 ARHGAP44Q17R89 818 aa15.07■□□□□ 0
NUP98-204ENST00000397004 GKAP1Q5VSY0 366 aaPredicted RBP15.07■□□□□ 0
NUP98-204ENST00000397004 ZNF746Q6NUN9 644 aaPredicted RBP15.07■□□□□ 0
NUP98-204ENST00000397004 CPLX4Q7Z7G2 160 aa15.07■□□□□ 0
NUP98-204ENST00000397004 SLFN12Q8IYM2 578 aa15.07■□□□□ 0
NUP98-204ENST00000397004 BTBD6Q96KE9 485 aa15.07■□□□□ 0
NUP98-204ENST00000397004 PCDHB18PQ96TA0 734 aa15.07■□□□□ 0
NUP98-204ENST00000397004 CARD9Q9H257 536 aa15.07■□□□□ 0
NUP98-204ENST00000397004 DAAM1Q9Y4D1 1078 aa15.07■□□□□ 0
NUP98-204ENST00000397004 TRIM37O94972 964 aa15.07■□□□□ 0
NUP98-204ENST00000397004 FAM196AQ6ZSG2 479 aa15.07■□□□□ 0
NUP98-204ENST00000397004 ELMO3Q96BJ8 720 aa15.07■□□□□ 0
NUP98-204ENST00000397004 ACTR5Q9H9F9 607 aaPredicted RBP15.07■□□□□ 0
NUP98-204ENST00000397004 OLFML3Q9NRN5 406 aa15.07■□□□□ 0
NUP98-204ENST00000397004 ABCF3Q9NUQ8 709 aa15.07■□□□□ 0
NUP98-204ENST00000397004 DMAC2Q9NW81 257 aa15.07■□□□□ 0
NUP98-204ENST00000397004 CCT8L1PA6NM43 557 aa15.07■□□□□ 0
NUP98-204ENST00000397004 KCNJ1P48048 391 aa15.07■□□□□ 0
NUP98-204ENST00000397004 ARHGEF19Q8IW93 802 aa15.07■□□□□ 0
NUP98-204ENST00000397004 SYCE1Q8N0S2 351 aa15.07■□□□□ 0
NUP98-204ENST00000397004 RDH13Q8NBN7 331 aa15.07■□□□□ 0
NUP98-204ENST00000397004 CENPTQ96BT3 561 aa15.07■□□□□ 0
NUP98-204ENST00000397004 KDM4CQ9H3R0 1056 aa15.07■□□□□ 0
NUP98-204ENST00000397004 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.07■□□□□ 07e-10■■■■■ 30.5
NUP98-204ENST00000397004 AAASQ9NRG9 546 aa15.07■□□□□ 0
NUP98-204ENST00000397004 C10orf71Q711Q0 1435 aa15.06■□□□□ 0
NUP98-204ENST00000397004 PYGMP11217 842 aa15.06■□□□□ 0
NUP98-204ENST00000397004 SREBF1P36956 1147 aa15.06■□□□□ 0
NUP98-204ENST00000397004 USP8P40818 1118 aa15.06■□□□□ 0
NUP98-204ENST00000397004 RRP1BQ14684 758 aaKnown RBP15.06■□□□□ 0
NUP98-204ENST00000397004 TLDC1Q6P9B6 456 aa15.06■□□□□ 0
NUP98-204ENST00000397004 PGM2Q96G03 612 aa15.06■□□□□ 0
NUP98-204ENST00000397004 QTRT2Q9H974 415 aaKnown RBP15.06■□□□□ 0
NUP98-204ENST00000397004 GOPCQ9HD26 462 aa15.06■□□□□ 0
NUP98-204ENST00000397004 CYP2J2P51589 502 aa15.06■□□□□ 0
NUP98-204ENST00000397004 IFFO1Q0D2I5 559 aa15.06■□□□□ 0
NUP98-204ENST00000397004 C1orf220Q5T0J3 134 aa15.06■□□□□ 0
NUP98-204ENST00000397004 PLEKHO2Q8TD55 490 aa15.06■□□□□ 0
NUP98-204ENST00000397004 LMBR1Q8WVP7 490 aa15.06■□□□□ 0
NUP98-204ENST00000397004 INTS2Q9H0H0 1204 aaKnown RBP15.06■□□□□ 0
NUP98-204ENST00000397004 METTL14Q9HCE5 456 aaKnown RBP15.06■□□□□ 0
NUP98-204ENST00000397004 C6orf229H3BNL8 230 aa15.06■□□□□ 0
NUP98-204ENST00000397004 ECM2O94769 699 aaPredicted RBP15.06■□□□□ 0
NUP98-204ENST00000397004 ANXA13P27216 316 aa15.06■□□□□ 0
NUP98-204ENST00000397004 MOXD1Q6UVY6 613 aa15.06■□□□□ 0
NUP98-204ENST00000397004 CEP57Q86XR8 500 aa15.06■□□□□ 0
NUP98-204ENST00000397004 RPGRQ92834 1020 aaKnown RBP15.06■□□□□ 0
NUP98-204ENST00000397004 RABGAP1Q9Y3P9 1069 aa15.06■□□□□ 0
NUP98-204ENST00000397004 C21orf2O43822 256 aa15.05■□□□□ 0
NUP98-204ENST00000397004 DNAJC8O75937 253 aaPredicted RBP15.05■□□□□ 0
NUP98-204ENST00000397004 EYA4O95677 639 aa15.05■□□□□ 0
NUP98-204ENST00000397004 ALAS1P13196 640 aa15.05■□□□□ 0
NUP98-204ENST00000397004 TCP10Q12799 353 aa15.05■□□□□ 0
NUP98-204ENST00000397004 AUHQ13825 339 aaKnown RBP15.05■□□□□ 0
NUP98-204ENST00000397004 MPP2Q14168 576 aa15.05■□□□□ 0
NUP98-204ENST00000397004 ZNF720Q7Z2F6 126 aa15.05■□□□□ 0
NUP98-204ENST00000397004 DAW1Q8N136 415 aa15.05■□□□□ 0
NUP98-204ENST00000397004 SCLT1Q96NL6 688 aa15.05■□□□□ 0
NUP98-204ENST00000397004 DDX23Q9BUQ8 820 aaKnown RBP15.05■□□□□ 0
NUP98-204ENST00000397004 AGPAT3Q9NRZ7 376 aa15.05■□□□□ 0
NUP98-204ENST00000397004 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.05■□□□□ 0
NUP98-204ENST00000397004 CTNNA2P26232 953 aa15.05■□□□□ -0
NUP98-204ENST00000397004 IFNAR2P48551 515 aa15.05■□□□□ -0
NUP98-204ENST00000397004 SNCBQ16143 134 aa15.05■□□□□ -0
NUP98-204ENST00000397004 OTOP1Q7RTM1 612 aa15.05■□□□□ -0
NUP98-204ENST00000397004 ELAC2Q9BQ52 826 aaKnown RBP15.05■□□□□ -0
NUP98-204ENST00000397004 SELENOSQ9BQE4 189 aa15.05■□□□□ -0
NUP98-204ENST00000397004 TRPC6Q9Y210 931 aa15.05■□□□□ -0
NUP98-204ENST00000397004 SCP2P22307 547 aa15.05■□□□□ -0
NUP98-204ENST00000397004 SLFN13Q68D06 897 aa15.05■□□□□ -0
NUP98-204ENST00000397004 NEK9Q8TD19 979 aa15.05■□□□□ -0
NUP98-204ENST00000397004 CD101Q93033 1021 aa15.05■□□□□ -0
NUP98-204ENST00000397004 DYDC2Q96IM9 177 aa15.05■□□□□ -0
NUP98-204ENST00000397004 HERPUD2Q9BSE4 406 aa15.05■□□□□ -0
NUP98-204ENST00000397004 APEX2Q9UBZ4 518 aa15.05■□□□□ -0
NUP98-204ENST00000397004 ZNFX1Q9P2E3 1918 aaKnown RBP15.05■□□□□ -0
NUP98-204ENST00000397004 QSER1Q2KHR3 1735 aa15.04■□□□□ -0
NUP98-204ENST00000397004 CHRNB2P17787 502 aa15.04■□□□□ -0
NUP98-204ENST00000397004 PSMC2P35998 433 aaKnown RBP15.04■□□□□ -0
NUP98-204ENST00000397004 PPP3CAQ08209 521 aa15.04■□□□□ -0
NUP98-204ENST00000397004 LRRC14Q15048 493 aa15.04■□□□□ -0
NUP98-204ENST00000397004 DOK7Q18PE1 504 aa15.04■□□□□ -0
NUP98-204ENST00000397004 EXOC3L1Q86VI1 746 aa15.04■□□□□ -0
NUP98-204ENST00000397004 MYCT1Q8N699 235 aa15.04■□□□□ -0
NUP98-204ENST00000397004 ANKLE1Q8NAG6 615 aa15.04■□□□□ -0
NUP98-204ENST00000397004 MKL1Q969V6 931 aa15.04■□□□□ -0
NUP98-204ENST00000397004 HOOK2Q96ED9 719 aa15.04■□□□□ -0
NUP98-204ENST00000397004 CHMP2AO43633 222 aa15.04■□□□□ -0
NUP98-204ENST00000397004 ATP6V1G2O95670 118 aa15.04■□□□□ -0
NUP98-204ENST00000397004 CCDC172P0C7W6 258 aa15.04■□□□□ -0
NUP98-204ENST00000397004 ADRA2BP18089 450 aa15.04■□□□□ -0
NUP98-204ENST00000397004 LMNB1P20700 586 aa15.04■□□□□ -0
NUP98-204ENST00000397004 CIITAP33076 1130 aa15.04■□□□□ -0
NUP98-204ENST00000397004 KIF22Q14807 665 aa15.04■□□□□ -0
NUP98-204ENST00000397004 CTNNAL1Q9UBT7 734 aa15.04■□□□□ -0
NUP98-204ENST00000397004 RIPK2O43353 540 aa15.04■□□□□ -0
NUP98-204ENST00000397004 DRG2P55039 364 aaKnown RBP15.04■□□□□ -0
NUP98-204ENST00000397004 KCNJ2P63252 427 aa15.04■□□□□ -0
NUP98-204ENST00000397004 UBXN2AP68543 259 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms