RNA–Protein interactions for RNA: ENST00000396654.6

AP1S3-203, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene AP1S3, Length 830 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-203ENST00000396654 USP49Q70CQ1 688 aa18.88■□□□□ 0.61
AP1S3-203ENST00000396654 LPPQ93052 612 aa18.88■□□□□ 0.61
AP1S3-203ENST00000396654 CALML4Q96GE6 196 aa18.88■□□□□ 0.61
AP1S3-203ENST00000396654 CPB2Q96IY4 423 aa18.88■□□□□ 0.61
AP1S3-203ENST00000396654 AK8Q96MA6 479 aa18.88■□□□□ 0.61
AP1S3-203ENST00000396654 KIFC3Q9BVG8 833 aa18.88■□□□□ 0.61
AP1S3-203ENST00000396654 AGPAT5Q9NUQ2 364 aa18.88■□□□□ 0.61
AP1S3-203ENST00000396654 TMEM161AQ9NX61 479 aa18.88■□□□□ 0.61
AP1S3-203ENST00000396654 DACT1Q9NYF0 836 aa18.88■□□□□ 0.61
AP1S3-203ENST00000396654 FAM189BP81408 668 aa18.87■□□□□ 0.61
AP1S3-203ENST00000396654 MBTD1Q05BQ5 628 aa18.87■□□□□ 0.61
AP1S3-203ENST00000396654 TMEM119Q4V9L6 283 aa18.87■□□□□ 0.61
AP1S3-203ENST00000396654 EPC2Q52LR7 807 aa18.87■□□□□ 0.61
AP1S3-203ENST00000396654 HYIQ5T013 277 aa18.87■□□□□ 0.61
AP1S3-203ENST00000396654 SPOUT1Q5T280 376 aaKnown RBP18.87■□□□□ 0.61
AP1S3-203ENST00000396654 TMEM192Q8IY95 271 aa18.87■□□□□ 0.61
AP1S3-203ENST00000396654 CMTR2Q8IYT2 770 aaKnown RBP18.87■□□□□ 0.61
AP1S3-203ENST00000396654 LRRC15Q8TF66 581 aa18.87■□□□□ 0.61
AP1S3-203ENST00000396654 EPSTI1Q96J88 318 aa18.87■□□□□ 0.61
AP1S3-203ENST00000396654 ZNF396Q96N95 335 aaPredicted RBP18.87■□□□□ 0.61
AP1S3-203ENST00000396654 NT5C3AQ9H0P0 336 aa18.87■□□□□ 0.61
AP1S3-203ENST00000396654 PLXNA4Q9HCM2 1894 aa18.87■□□□□ 0.61
AP1S3-203ENST00000396654 RNF19AQ9NV58 838 aa18.87■□□□□ 0.61
AP1S3-203ENST00000396654 TCHHQ07283 1943 aa18.86■□□□□ 0.61
AP1S3-203ENST00000396654 B4GALT5O43286 388 aa18.86■□□□□ 0.61
AP1S3-203ENST00000396654 TSPAN1O60635 241 aa18.86■□□□□ 0.61
AP1S3-203ENST00000396654 HIP1RO75146 1068 aa18.86■□□□□ 0.61
AP1S3-203ENST00000396654 PLA2G4BP0C869 781 aa18.86■□□□□ 0.61
AP1S3-203ENST00000396654 ATF7P17544 494 aaPredicted RBP18.86■□□□□ 0.61
AP1S3-203ENST00000396654 PLCG1P19174 1290 aa18.86■□□□□ 0.61
AP1S3-203ENST00000396654 CACNB1Q02641 598 aaPredicted RBP18.86■□□□□ 0.61
AP1S3-203ENST00000396654 RINT1Q6NUQ1 792 aa18.86■□□□□ 0.61
AP1S3-203ENST00000396654 CDR2LQ86X02 465 aaPredicted RBP18.86■□□□□ 0.61
AP1S3-203ENST00000396654 DEPTORQ8TB45 409 aa18.86■□□□□ 0.61
AP1S3-203ENST00000396654 ELAC1Q9H777 363 aaKnown RBP18.86■□□□□ 0.61
AP1S3-203ENST00000396654 CHST12Q9NRB3 414 aa18.86■□□□□ 0.61
AP1S3-203ENST00000396654 FAM105AQ9NUU6 356 aa18.86■□□□□ 0.61
AP1S3-203ENST00000396654 USP20Q9Y2K6 914 aa18.86■□□□□ 0.61
AP1S3-203ENST00000396654 NPHP3-ACAD11A0A0J9YXS1 232 aa18.85■□□□□ 0.61
AP1S3-203ENST00000396654 A0A0U1RQF3 1178 aa18.85■□□□□ 0.61
AP1S3-203ENST00000396654 MEIS3P2A8K0S8 358 aa18.85■□□□□ 0.61
AP1S3-203ENST00000396654 SFI1A8K8P3 1242 aa18.85■□□□□ 0.61
AP1S3-203ENST00000396654 LPXNO60711 386 aa18.85■□□□□ 0.61
AP1S3-203ENST00000396654 BECN1Q14457 450 aa18.85■□□□□ 0.61
AP1S3-203ENST00000396654 SLC39A14Q15043 492 aa18.85■□□□□ 0.61
AP1S3-203ENST00000396654 IFNLR1Q8IU57 520 aaPredicted RBP18.85■□□□□ 0.61
AP1S3-203ENST00000396654 ZBTB8OSQ8IWT0 167 aa18.85■□□□□ 0.61
AP1S3-203ENST00000396654 ABI1Q8IZP0 508 aa18.85■□□□□ 0.61
AP1S3-203ENST00000396654 HELQQ8TDG4 1101 aa18.85■□□□□ 0.61
AP1S3-203ENST00000396654 SYMPKQ92797 1274 aaKnown RBP18.85■□□□□ 0.61
AP1S3-203ENST00000396654 IFT74Q96LB3 600 aa18.85■□□□□ 0.61
AP1S3-203ENST00000396654 SRPRBQ9Y5M8 271 aaKnown RBP18.85■□□□□ 0.61
AP1S3-203ENST00000396654 PRRC2BQ5JSZ5 2229 aaKnown RBP18.85■□□□□ 0.61
AP1S3-203ENST00000396654 CCDC169A6NNP5 214 aa18.84■□□□□ 0.61
AP1S3-203ENST00000396654 GTPBP6O43824 516 aaPredicted RBP18.84■□□□□ 0.61
AP1S3-203ENST00000396654 LINC00271P0C7V0 271 aa18.84■□□□□ 0.61
AP1S3-203ENST00000396654 ARF4P18085 180 aaPredicted RBP18.84■□□□□ 0.61
AP1S3-203ENST00000396654 HOXA11P31270 313 aaPredicted RBP18.84■□□□□ 0.61
AP1S3-203ENST00000396654 NAMPTP43490 491 aa18.84■□□□□ 0.61
AP1S3-203ENST00000396654 NASPP49321 788 aaPredicted RBP18.84■□□□□ 0.61
AP1S3-203ENST00000396654 SLC12A3P55017 1021 aa18.84■□□□□ 0.61
AP1S3-203ENST00000396654 PEX3P56589 373 aa18.84■□□□□ 0.61
AP1S3-203ENST00000396654 GPM6BQ13491 265 aa18.84■□□□□ 0.61
AP1S3-203ENST00000396654 MCM6Q14566 821 aa18.84■□□□□ 0.61
AP1S3-203ENST00000396654 TMEM132AQ24JP5 1023 aa18.84■□□□□ 0.61
AP1S3-203ENST00000396654 CLLU1OSQ5K130 101 aa18.84■□□□□ 0.61
AP1S3-203ENST00000396654 UBXN11Q5T124 520 aa18.84■□□□□ 0.61
AP1S3-203ENST00000396654 C1orf186Q6ZWK4 172 aa18.84■□□□□ 0.61
AP1S3-203ENST00000396654 ZNF598Q86UK7 904 aaKnown RBP18.84■□□□□ 0.61
AP1S3-203ENST00000396654 DAW1Q8N136 415 aa18.84■□□□□ 0.61
AP1S3-203ENST00000396654 SYT2Q8N9I0 419 aaPredicted RBP18.84■□□□□ 0.61
AP1S3-203ENST00000396654 KIFAP3Q92845 792 aa18.84■□□□□ 0.61
AP1S3-203ENST00000396654 CHAMP1Q96JM3 812 aa18.84■□□□□ 0.61
AP1S3-203ENST00000396654 SAMD11Q96NU1 681 aa18.84■□□□□ 0.61
AP1S3-203ENST00000396654 APOL6Q9BWW8 343 aa18.84■□□□□ 0.61
AP1S3-203ENST00000396654 EIF2AQ9BY44 585 aaKnown RBP18.84■□□□□ 0.61
AP1S3-203ENST00000396654 RNF216Q9NWF9 866 aaPredicted RBP18.84■□□□□ 0.61
AP1S3-203ENST00000396654 INPP5FQ9Y2H2 1132 aa18.84■□□□□ 0.61
AP1S3-203ENST00000396654 PCDHB2Q9Y5E7 798 aa18.84■□□□□ 0.61
AP1S3-203ENST00000396654 TDRD15B5MCY1 1934 aaKnown RBP18.83■□□□□ 0.6
AP1S3-203ENST00000396654 POU5F1BQ06416 359 aa18.83■□□□□ 0.6
AP1S3-203ENST00000396654 MAPK7Q13164 816 aa18.83■□□□□ 0.6
AP1S3-203ENST00000396654 PPP2R5AQ15172 486 aa18.83■□□□□ 0.6
AP1S3-203ENST00000396654 AMHR2Q16671 573 aa18.83■□□□□ 0.6
AP1S3-203ENST00000396654 GPBP1Q86WP2 473 aa18.83■□□□□ 0.6
AP1S3-203ENST00000396654 KRI1Q8N9T8 703 aaKnown RBP18.83■□□□□ 0.6
AP1S3-203ENST00000396654 LINC00301Q8NCQ3 95 aa18.83■□□□□ 0.6
AP1S3-203ENST00000396654 CASD1Q96PB1 797 aa18.83■□□□□ 0.6
AP1S3-203ENST00000396654 CCSER1Q9C0I3 900 aa18.83■□□□□ 0.6
AP1S3-203ENST00000396654 TMEM117Q9H0C3 514 aa18.83■□□□□ 0.6
AP1S3-203ENST00000396654 BLOC1S4Q9NUP1 217 aa18.83■□□□□ 0.6
AP1S3-203ENST00000396654 MTCH2Q9Y6C9 303 aa18.83■□□□□ 0.6
AP1S3-203ENST00000396654 TTLL13PA6NNM8 815 aa18.82■□□□□ 0.6
AP1S3-203ENST00000396654 SPTLC2O15270 562 aa18.82■□□□□ 0.6
AP1S3-203ENST00000396654 PRKCBP05771 671 aa18.82■□□□□ 0.6
AP1S3-203ENST00000396654 BMPR1AP36894 532 aa18.82■□□□□ 0.6
AP1S3-203ENST00000396654 NCBP1Q09161 790 aaKnown RBP18.82■□□□□ 0.6
AP1S3-203ENST00000396654 CDCA2Q69YH5 1023 aaPredicted RBP18.82■□□□□ 0.6
AP1S3-203ENST00000396654 NOTUMQ6P988 496 aa18.82■□□□□ 0.6
AP1S3-203ENST00000396654 FAM43BQ6ZT52 329 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms