RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 CPLX4Q7Z7G2 160 aa14.42□□□□□ -0.1
TRIM40-207ENST00000396581 HVCN1Q96D96 273 aa14.42□□□□□ -0.1
TRIM40-207ENST00000396581 STK33Q9BYT3 514 aa14.42□□□□□ -0.1
TRIM40-207ENST00000396581 OLFML3Q9NRN5 406 aa14.42□□□□□ -0.1
TRIM40-207ENST00000396581 CNOT7Q9UIV1 285 aaKnown RBP14.42□□□□□ -0.1
TRIM40-207ENST00000396581 PPP1R9AQ9ULJ8 1098 aa14.42□□□□□ -0.1
TRIM40-207ENST00000396581 TPX2Q9ULW0 747 aaKnown RBP14.42□□□□□ -0.1
TRIM40-207ENST00000396581 DNM3Q9UQ16 869 aa14.42□□□□□ -0.1
TRIM40-207ENST00000396581 ATP8A1Q9Y2Q0 1164 aa14.42□□□□□ -0.1
TRIM40-207ENST00000396581 COL2A1P02458 1487 aaPredicted RBP14.42□□□□□ -0.1
TRIM40-207ENST00000396581 CCT8L1PA6NM43 557 aa14.42□□□□□ -0.1
TRIM40-207ENST00000396581 TGFB1I1O43294 461 aa14.42□□□□□ -0.1
TRIM40-207ENST00000396581 TCEAL1Q15170 157 aa14.42□□□□□ -0.1
TRIM40-207ENST00000396581 DLGAP5Q15398 846 aa14.42□□□□□ -0.1
TRIM40-207ENST00000396581 GJB7Q6PEY0 223 aa14.42□□□□□ -0.1
TRIM40-207ENST00000396581 ZDHHC24Q6UX98 284 aa14.42□□□□□ -0.1
TRIM40-207ENST00000396581 ERMNQ8TAM6 284 aa14.42□□□□□ -0.1
TRIM40-207ENST00000396581 LENG9Q96B70 501 aa14.42□□□□□ -0.1
TRIM40-207ENST00000396581 MKNK1Q9BUB5 465 aa14.42□□□□□ -0.1
TRIM40-207ENST00000396581 GPR88Q9GZN0 384 aa14.42□□□□□ -0.1
TRIM40-207ENST00000396581 ZHX3Q9H4I2 956 aa14.42□□□□□ -0.1
TRIM40-207ENST00000396581 LTBP3Q9NS15 1303 aa14.42□□□□□ -0.1
TRIM40-207ENST00000396581 PNMA2Q9UL42 364 aa14.42□□□□□ -0.1
TRIM40-207ENST00000396581 SLC12A4Q9UP95 1085 aa14.42□□□□□ -0.1
TRIM40-207ENST00000396581 CCDC169A6NNP5 214 aa14.41□□□□□ -0.1
TRIM40-207ENST00000396581 USP17L15C9J2P7 530 aa14.41□□□□□ -0.1
TRIM40-207ENST00000396581 USP17L13C9JLJ4 530 aa14.41□□□□□ -0.1
TRIM40-207ENST00000396581 USP17L11C9JVI0 530 aa14.41□□□□□ -0.1
TRIM40-207ENST00000396581 USP17L18D6R9N7 530 aa14.41□□□□□ -0.1
TRIM40-207ENST00000396581 USP17L22D6RA61 530 aa14.41□□□□□ -0.1
TRIM40-207ENST00000396581 USP17L17D6RBQ6 530 aa14.41□□□□□ -0.1
TRIM40-207ENST00000396581 USP17L19D6RCP7 530 aa14.41□□□□□ -0.1
TRIM40-207ENST00000396581 USP17L20D6RJB6 530 aa14.41□□□□□ -0.1
TRIM40-207ENST00000396581 EIF3DO15371 548 aaKnown RBP eCLIP14.41□□□□□ -0.1
TRIM40-207ENST00000396581 SHBGP04278 402 aa14.41□□□□□ -0.1
TRIM40-207ENST00000396581 MMP14P50281 582 aa14.41□□□□□ -0.1
TRIM40-207ENST00000396581 PMS2P54278 862 aa14.41□□□□□ -0.1
TRIM40-207ENST00000396581 USP17L24Q0WX57 530 aa14.41□□□□□ -0.1
TRIM40-207ENST00000396581 KIAA1755Q5JYT7 1200 aa14.41□□□□□ -0.1
TRIM40-207ENST00000396581 FKBP1CQ5VVH2 108 aa14.41□□□□□ -0.1
TRIM40-207ENST00000396581 USP17L6PQ6QN14 398 aa14.41□□□□□ -0.1
TRIM40-207ENST00000396581 CROCCP2Q86T23 111 aa14.41□□□□□ -0.1
TRIM40-207ENST00000396581 CLEC10AQ8IUN9 316 aa14.41□□□□□ -0.1
TRIM40-207ENST00000396581 FMNL3Q8IVF7 1028 aa14.41□□□□□ -0.1
TRIM40-207ENST00000396581 CCDC197Q8NCU1 140 aa14.41□□□□□ -0.1
TRIM40-207ENST00000396581 MDM1Q8TC05 714 aa14.41□□□□□ -0.1
TRIM40-207ENST00000396581 NEK9Q8TD19 979 aa14.41□□□□□ -0.1
TRIM40-207ENST00000396581 ERVK-5Q9HDB9 667 aa14.41□□□□□ -0.1
TRIM40-207ENST00000396581 BCS1LQ9Y276 419 aa14.41□□□□□ -0.1
TRIM40-207ENST00000396581 UTRNP46939 3433 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 IGSF9BQ9UPX0 1349 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 GOLGA6L10A0A0M3HER8 536 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 MEIS2O14770 477 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 KIAA0391O15091 583 aaKnown RBP14.4□□□□□ -0.1
TRIM40-207ENST00000396581 CTNND1O60716 968 aaKnown RBP14.4□□□□□ -0.1
TRIM40-207ENST00000396581 CHN1P15882 459 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 VCAM1P19320 739 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 SLC8A1P32418 973 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 SLC16A2P36021 539 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 EIF6P56537 245 aaKnown RBP14.4□□□□□ -0.1
TRIM40-207ENST00000396581 PABPC4Q13310 644 aaKnown RBP eCLIP14.4□□□□□ -0.1
TRIM40-207ENST00000396581 CIAPIN1Q6FI81 312 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 RNF25Q96BH1 459 aaPredicted RBP14.4□□□□□ -0.1
TRIM40-207ENST00000396581 DONSONQ9NYP3 566 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 TMOD2Q9NZR1 351 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 ZMYM2Q9UBW7 1377 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 BACH1O14867 736 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 KIF1CO43896 1103 aaKnown RBP14.4□□□□□ -0.1
TRIM40-207ENST00000396581 AGTP01019 485 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 SLURP2P0DP57 97 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 HSPA6P17066 643 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 GBP1P32455 592 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 ELF1P32519 619 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 PTGIRP43119 386 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 MAPK7Q13164 816 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 QRICH1Q2TAL8 776 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 SPDYE2Q495Y8 402 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 CERKLQ49MI3 558 aaPredicted RBP14.4□□□□□ -0.1
TRIM40-207ENST00000396581 TCERG1LQ5VWI1 586 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 BTNL9Q6UXG8 535 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 JAMLQ86YT9 394 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 GLYCTKQ8IVS8 523 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 ZBED3Q96IU2 234 aaPredicted RBP14.4□□□□□ -0.1
TRIM40-207ENST00000396581 POLR3CQ9BUI4 534 aaPredicted RBP14.4□□□□□ -0.1
TRIM40-207ENST00000396581 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.4□□□□□ -0.1
TRIM40-207ENST00000396581 GRHL1Q9NZI5 618 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 ZNF70Q9UC06 446 aaPredicted RBP14.4□□□□□ -0.1
TRIM40-207ENST00000396581 PCDHA3Q9Y5H8 950 aa14.4□□□□□ -0.1
TRIM40-207ENST00000396581 SIPA1L1O43166 1804 aa14.39□□□□□ -0.11
TRIM40-207ENST00000396581 RPTORQ8N122 1335 aa14.39□□□□□ -0.11
TRIM40-207ENST00000396581 ANKRD62A6NC57 917 aa14.39□□□□□ -0.11
TRIM40-207ENST00000396581 MMEP08473 750 aa14.39□□□□□ -0.11
TRIM40-207ENST00000396581 ELF3P78545 371 aaPredicted RBP14.39□□□□□ -0.11
TRIM40-207ENST00000396581 ARHGAP4P98171 946 aa14.39□□□□□ -0.11
TRIM40-207ENST00000396581 TNIP1Q15025 636 aa14.39□□□□□ -0.11
TRIM40-207ENST00000396581 GIMAP7Q8NHV1 300 aa14.39□□□□□ -0.11
TRIM40-207ENST00000396581 CTNNBL1Q8WYA6 563 aaPredicted RBP14.39□□□□□ -0.11
TRIM40-207ENST00000396581 MKL1Q969V6 931 aa14.39□□□□□ -0.11
TRIM40-207ENST00000396581 FAM20AQ96MK3 541 aa14.39□□□□□ -0.11
TRIM40-207ENST00000396581 PCYOX1Q9UHG3 505 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms