RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 ADM5C9JUS6 153 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 CNGA1P29973 690 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 TMEM161BQ8NDZ6 487 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 OSBPL9Q96SU4 736 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 MMS19Q96T76 1030 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 ACBD3Q9H3P7 528 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 RAB21Q9UL25 225 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 MYH11P35749 1972 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 ZSCAN20P17040 1043 aaPredicted RBP17.53■□□□□ 0.4
SNX6-202ENST00000396526 KLRC1P26715 233 aa17.53■□□□□ 0.4
SNX6-202ENST00000396526 STRN3Q13033 797 aa17.53■□□□□ 0.4
SNX6-202ENST00000396526 MTERF2Q49AM1 385 aa17.53■□□□□ 0.4
SNX6-202ENST00000396526 CFAP221Q4G0U5 840 aa17.53■□□□□ 0.4
SNX6-202ENST00000396526 CBWD6Q4V339 395 aa17.53■□□□□ 0.4
SNX6-202ENST00000396526 CBWD3Q5JTY5 395 aa17.53■□□□□ 0.4
SNX6-202ENST00000396526 CBWD5Q5RIA9 395 aa17.53■□□□□ 0.4
SNX6-202ENST00000396526 ZC3H15Q8WU90 426 aaKnown RBP17.53■□□□□ 0.4
SNX6-202ENST00000396526 POMGNT1Q8WZA1 660 aa17.53■□□□□ 0.4
SNX6-202ENST00000396526 IGSF9BQ9UPX0 1349 aa17.53■□□□□ 0.4
SNX6-202ENST00000396526 EVI5O60447 810 aa17.53■□□□□ 0.4
SNX6-202ENST00000396526 PNMA6AP0CW24 399 aaPredicted RBP17.53■□□□□ 0.4
SNX6-202ENST00000396526 OSBPP22059 807 aa17.53■□□□□ 0.4
SNX6-202ENST00000396526 ALDH5A1P51649 535 aaPredicted RBP17.53■□□□□ 0.4
SNX6-202ENST00000396526 ARHGAP44Q17R89 818 aa17.53■□□□□ 0.4
SNX6-202ENST00000396526 FAM160B1Q5W0V3 765 aa17.53■□□□□ 0.4
SNX6-202ENST00000396526 CYFIP1Q7L576 1253 aa17.53■□□□□ 0.4
SNX6-202ENST00000396526 FASTKD5Q7L8L6 764 aaKnown RBP17.53■□□□□ 0.4
SNX6-202ENST00000396526 SLC7A3Q8WY07 619 aa17.53■□□□□ 0.4
SNX6-202ENST00000396526 ATP8B3O60423 1300 aa17.53■□□□□ 0.4
SNX6-202ENST00000396526 F8VZ95 297 aa17.53■□□□□ 0.4
SNX6-202ENST00000396526 HNRNPDLO14979 420 aaKnown RBP17.53■□□□□ 0.4
SNX6-202ENST00000396526 ZNF862O60290 1169 aa17.53■□□□□ 0.4
SNX6-202ENST00000396526 RGS20O76081 388 aa17.53■□□□□ 0.4
SNX6-202ENST00000396526 TGFB3P10600 412 aa17.53■□□□□ 0.4
SNX6-202ENST00000396526 ITIH3Q06033 890 aa17.53■□□□□ 0.4
SNX6-202ENST00000396526 BRDTQ58F21 947 aaPredicted RBP17.53■□□□□ 0.4
SNX6-202ENST00000396526 TREML2Q5T2D2 321 aa17.53■□□□□ 0.4
SNX6-202ENST00000396526 DPY19L2P1Q6NXN4 242 aa17.53■□□□□ 0.4
SNX6-202ENST00000396526 USP50Q70EL3 339 aaPredicted RBP17.53■□□□□ 0.4
SNX6-202ENST00000396526 ARMC9Q7Z3E5 817 aa17.53■□□□□ 0.4
SNX6-202ENST00000396526 U2AF1L4Q8WU68 220 aaKnown RBP17.53■□□□□ 0.4
SNX6-202ENST00000396526 KIAA1586Q9HCI6 787 aa17.53■□□□□ 0.4
SNX6-202ENST00000396526 PALMO75781 387 aa17.52■□□□□ 0.4
SNX6-202ENST00000396526 CCDC60Q8IWA6 550 aaPredicted RBP17.52■□□□□ 0.4
SNX6-202ENST00000396526 SYCE1Q8N0S2 351 aa17.52■□□□□ 0.4
SNX6-202ENST00000396526 ANKZF1Q9H8Y5 726 aa17.52■□□□□ 0.4
SNX6-202ENST00000396526 SEPT11Q9NVA2 429 aaKnown RBP17.52■□□□□ 0.4
SNX6-202ENST00000396526 GOLGB1Q14789 3259 aaKnown RBP17.52■□□□□ 0.39
SNX6-202ENST00000396526 ZRANB2O95218 330 aaKnown RBP eCLIP17.52■□□□□ 0.39
SNX6-202ENST00000396526 GCLMP48507 274 aa17.52■□□□□ 0.39
SNX6-202ENST00000396526 SNRNP35Q16560 246 aaKnown RBP17.52■□□□□ 0.39
SNX6-202ENST00000396526 LONRF2Q1L5Z9 754 aa17.52■□□□□ 0.39
SNX6-202ENST00000396526 GJB7Q6PEY0 223 aa17.52■□□□□ 0.39
SNX6-202ENST00000396526 KCNV1Q6PIU1 500 aa17.52■□□□□ 0.39
SNX6-202ENST00000396526 HDXQ7Z353 690 aa17.52■□□□□ 0.39
SNX6-202ENST00000396526 UBE2TQ9NPD8 197 aaPredicted RBP17.52■□□□□ 0.39
SNX6-202ENST00000396526 ZNF446Q9NWS9 450 aa17.52■□□□□ 0.39
SNX6-202ENST00000396526 TARSL2A2RTX5 802 aaKnown RBP17.51■□□□□ 0.39
SNX6-202ENST00000396526 IRF6O14896 467 aa17.51■□□□□ 0.39
SNX6-202ENST00000396526 CNTN2Q02246 1040 aa17.51■□□□□ 0.39
SNX6-202ENST00000396526 C9orf131Q5VYM1 1079 aa17.51■□□□□ 0.39
SNX6-202ENST00000396526 NOA1Q8NC60 698 aaKnown RBP17.51■□□□□ 0.39
SNX6-202ENST00000396526 RBBP6Q7Z6E9 1792 aaKnown RBP17.51■□□□□ 0.39
SNX6-202ENST00000396526 A0A0G2JLL6 359 aaPredicted RBP17.51■□□□□ 0.39
SNX6-202ENST00000396526 PMM2O15305 246 aa17.51■□□□□ 0.39
SNX6-202ENST00000396526 RPS6KA1Q15418 735 aa17.51■□□□□ 0.39
SNX6-202ENST00000396526 PRRT2Q7Z6L0 340 aaPredicted RBP17.51■□□□□ 0.39
SNX6-202ENST00000396526 CTNNBL1Q8WYA6 563 aaPredicted RBP17.51■□□□□ 0.39
SNX6-202ENST00000396526 PCDHGC5Q9Y5F6 944 aa17.51■□□□□ 0.39
SNX6-202ENST00000396526 SSC5DA1L4H1 1573 aa17.51■□□□□ 0.39
SNX6-202ENST00000396526 KIAA0391O15091 583 aaKnown RBP17.51■□□□□ 0.39
SNX6-202ENST00000396526 KRT39Q6A163 491 aa17.51■□□□□ 0.39
SNX6-202ENST00000396526 WDR93Q6P2C0 686 aa17.51■□□□□ 0.39
SNX6-202ENST00000396526 SELENOOQ9BVL4 669 aa17.51■□□□□ 0.39
SNX6-202ENST00000396526 POLR3FQ9H1D9 316 aaPredicted RBP17.51■□□□□ 0.39
SNX6-202ENST00000396526 AZI2Q9H6S1 392 aa17.51■□□□□ 0.39
SNX6-202ENST00000396526 A0A0U1RQG5 324 aaPredicted RBP17.5■□□□□ 0.39
SNX6-202ENST00000396526 SPDYE5A6NIY4 337 aa17.5■□□□□ 0.39
SNX6-202ENST00000396526 OATP04181 439 aa17.5■□□□□ 0.39
SNX6-202ENST00000396526 GARTP22102 1010 aa17.5■□□□□ 0.39
SNX6-202ENST00000396526 LIG4P49917 911 aa17.5■□□□□ 0.39
SNX6-202ENST00000396526 KCTD2Q14681 263 aa17.5■□□□□ 0.39
SNX6-202ENST00000396526 DEPTORQ8TB45 409 aa17.5■□□□□ 0.39
SNX6-202ENST00000396526 TMC2Q8TDI7 906 aa17.5■□□□□ 0.39
SNX6-202ENST00000396526 CCDC127Q96BQ5 260 aa17.5■□□□□ 0.39
SNX6-202ENST00000396526 GOLGA8IPA6NC78 632 aa17.5■□□□□ 0.39
SNX6-202ENST00000396526 GOLGA8JA6NMD2 632 aa17.5■□□□□ 0.39
SNX6-202ENST00000396526 ZNF185O15231 689 aa17.5■□□□□ 0.39
SNX6-202ENST00000396526 SORBS3O60504 671 aa17.5■□□□□ 0.39
SNX6-202ENST00000396526 SEC31AO94979 1220 aaKnown RBP17.5■□□□□ 0.39
SNX6-202ENST00000396526 TFRCP02786 760 aaKnown RBP17.5■□□□□ 0.39
SNX6-202ENST00000396526 FAM81BQ96LP2 452 aa17.5■□□□□ 0.39
SNX6-202ENST00000396526 ASCC2Q9H1I8 757 aaPredicted RBP17.5■□□□□ 0.39
SNX6-202ENST00000396526 BTBD7Q9P203 1132 aa17.5■□□□□ 0.39
SNX6-202ENST00000396526 A0A0A6YYK5 440 aaPredicted RBP17.49■□□□□ 0.39
SNX6-202ENST00000396526 MFAP3P55082 362 aa17.49■□□□□ 0.39
SNX6-202ENST00000396526 PPIL2Q13356 520 aa17.49■□□□□ 0.39
SNX6-202ENST00000396526 EMC2Q15006 297 aa17.49■□□□□ 0.39
SNX6-202ENST00000396526 NFRKBQ6P4R8 1299 aa17.49■□□□□ 0.39
SNX6-202ENST00000396526 EXOC8Q8IYI6 725 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms