RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 KLHL25Q9H0H3 589 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 DMAP1Q9NPF5 467 aaPredicted RBP9.04□□□□□ -0.96
NDE1-202ENST00000396355 GIMAP4Q9NUV9 329 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 PCMTD2Q9NV79 361 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 DCTN4Q9UJW0 460 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 NID2Q14112 1375 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 FAM153BP0C7A2 387 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 KCNA4P22459 653 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 SP100P23497 879 aaPredicted RBP9.03□□□□□ -0.96
NDE1-202ENST00000396355 BPIFB4P59827 614 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 MDM2Q00987 491 aaPredicted RBP9.03□□□□□ -0.96
NDE1-202ENST00000396355 NR5A1Q13285 461 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 MYBPC2Q14324 1141 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 FAM153CQ494X1 144 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 NCCRP1Q6ZVX7 275 aaPredicted RBP9.03□□□□□ -0.96
NDE1-202ENST00000396355 RRAGAQ7L523 313 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 RASSF3Q86WH2 238 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 ZNF280CQ8ND82 737 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 SUPT20HQ8NEM7 779 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 ERP27Q96DN0 273 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 MED15Q96RN5 788 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 CCT7Q99832 543 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 MKNK1Q9BUB5 465 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 RANBP17Q9H2T7 1088 aaKnown RBP9.03□□□□□ -0.96
NDE1-202ENST00000396355 FAM153AQ9UHL3 310 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 HAO1Q9UJM8 370 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 C10orf71Q711Q0 1435 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 MAGEA13PA6NCF6 341 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 UNCXA6NJT0 531 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 GYG2O15488 501 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 CAPN1P07384 714 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 LIFRP42702 1097 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 ADAM9Q13443 819 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 RPS6KA1Q15418 735 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 ALX1Q15699 326 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 CDCA2Q69YH5 1023 aaPredicted RBP9.03□□□□□ -0.96
NDE1-202ENST00000396355 TTC30AQ86WT1 665 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 MIGA1Q8NAN2 632 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 PITPNM3Q9BZ71 974 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 AZI2Q9H6S1 392 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 ZWILCHQ9H900 591 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 MTRF1LQ9UGC7 380 aaKnown RBP9.03□□□□□ -0.96
NDE1-202ENST00000396355 EFR3BQ9Y2G0 817 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 BAZ2BQ9UIF8 2168 aaKnown RBP9.03□□□□□ -0.96
NDE1-202ENST00000396355 PGM3O95394 542 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 SHBGP04278 402 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 LDHCP07864 332 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 KRT16P08779 473 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 KCNA2P16389 499 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 COPS2P61201 443 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 NOP14P78316 857 aaKnown RBP9.03□□□□□ -0.96
NDE1-202ENST00000396355 EVX2Q03828 476 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 USP49Q70CQ1 688 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 ZNF554Q86TJ5 538 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 SULF1Q8IWU6 871 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 C2orf69Q8N8R5 385 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 OXER1Q8TDS5 423 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 P3H4Q92791 437 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 OLFM3Q96PB7 478 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 RBM12Q9NTZ6 932 aaKnown RBP9.03□□□□□ -0.96
NDE1-202ENST00000396355 WDR35Q9P2L0 1181 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 DKK3Q9UBP4 350 aa9.03□□□□□ -0.96
NDE1-202ENST00000396355 MROH5Q6ZUA9 1318 aa9.02□□□□□ -0.96
NDE1-202ENST00000396355 CCDC169A6NNP5 214 aa9.02□□□□□ -0.96
NDE1-202ENST00000396355 WNT7AO00755 349 aa9.02□□□□□ -0.96
NDE1-202ENST00000396355 PPEF1O14829 653 aaPredicted RBP9.02□□□□□ -0.96
NDE1-202ENST00000396355 MMP1P03956 469 aa9.02□□□□□ -0.96
NDE1-202ENST00000396355 KRT15P19012 456 aa9.02□□□□□ -0.96
NDE1-202ENST00000396355 PMS1P54277 932 aaKnown RBP9.02□□□□□ -0.96
NDE1-202ENST00000396355 UAP1Q16222 522 aaPredicted RBP9.02□□□□□ -0.96
NDE1-202ENST00000396355 AOC3Q16853 763 aa9.02□□□□□ -0.96
NDE1-202ENST00000396355 CIAPIN1Q6FI81 312 aa9.02□□□□□ -0.96
NDE1-202ENST00000396355 MTHFD1LQ6UB35 978 aa9.02□□□□□ -0.96
NDE1-202ENST00000396355 CLEC4GQ6UXB4 293 aa9.02□□□□□ -0.96
NDE1-202ENST00000396355 NOSTRINQ8IVI9 506 aa9.02□□□□□ -0.96
NDE1-202ENST00000396355 PIGOQ8TEQ8 1089 aa9.02□□□□□ -0.96
NDE1-202ENST00000396355 BARX2Q9UMQ3 279 aaPredicted RBP9.02□□□□□ -0.96
NDE1-202ENST00000396355 TRAF3IP3Q9Y228 551 aa9.02□□□□□ -0.96
NDE1-202ENST00000396355 CARD8Q9Y2G2 431 aa9.02□□□□□ -0.96
NDE1-202ENST00000396355 SLC12A7Q9Y666 1083 aa9.02□□□□□ -0.96
NDE1-202ENST00000396355 STK36Q9NRP7 1315 aa9.02□□□□□ -0.97
NDE1-202ENST00000396355 FAM205CA6NFA0 338 aa9.02□□□□□ -0.97
NDE1-202ENST00000396355 ENTPD5O75356 428 aa9.02□□□□□ -0.97
NDE1-202ENST00000396355 PEX5P50542 639 aa9.02□□□□□ -0.97
NDE1-202ENST00000396355 BASP1P80723 227 aaKnown RBP9.02□□□□□ -0.97
NDE1-202ENST00000396355 RASGRP2Q7LDG7 609 aa9.02□□□□□ -0.97
NDE1-202ENST00000396355 TMEM139Q8IV31 216 aa9.02□□□□□ -0.97
NDE1-202ENST00000396355 FAM161BQ96MY7 647 aa9.02□□□□□ -0.97
NDE1-202ENST00000396355 LRRC37BQ96QE4 947 aa9.02□□□□□ -0.97
NDE1-202ENST00000396355 NOC4LQ9BVI4 516 aaKnown RBP9.02□□□□□ -0.97
NDE1-202ENST00000396355 ZC3H12CQ9C0D7 883 aaKnown RBP9.02□□□□□ -0.97
NDE1-202ENST00000396355 SELENONQ9NZV5 590 aa9.02□□□□□ -0.97
NDE1-202ENST00000396355 PCDHB6Q9Y5E3 794 aa9.02□□□□□ -0.97
NDE1-202ENST00000396355 ERVV-1B6SEH8 477 aa9.02□□□□□ -0.97
NDE1-202ENST00000396355 TRAF5O00463 557 aa9.02□□□□□ -0.97
NDE1-202ENST00000396355 UQCRFS1P1P0C7P4 283 aa9.02□□□□□ -0.97
NDE1-202ENST00000396355 IFNAR1P17181 557 aa9.02□□□□□ -0.97
NDE1-202ENST00000396355 NEK2P51955 445 aa9.02□□□□□ -0.97
NDE1-202ENST00000396355 FMR1Q06787 632 aaKnown RBP eCLIP9.02□□□□□ -0.97
NDE1-202ENST00000396355 MKRN4PQ13434 485 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms