RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 CDC25AP30304 524 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 NPEPPSP55786 919 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 PSMC5P62195 406 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 GNGT1P63211 74 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 RBL2Q08999 1139 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 GRIK3Q13003 919 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 ITGB3BPQ13352 177 aaPredicted RBP5.84□□□□□ -1.47
VPS41-203ENST00000395969 SPECC1Q5M775 1068 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 TLDC1Q6P9B6 456 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 CCNI2Q6ZMN8 369 aaPredicted RBP5.84□□□□□ -1.47
VPS41-203ENST00000395969 FASTKD5Q7L8L6 764 aaKnown RBP5.84□□□□□ -1.47
VPS41-203ENST00000395969 NLRX1Q86UT6 975 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 RNF10Q8N5U6 811 aaKnown RBP5.84□□□□□ -1.47
VPS41-203ENST00000395969 LINC01465Q8N7H1 131 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 TRPM4Q8TD43 1214 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 TMC2Q8TDI7 906 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 NSUN6Q8TEA1 469 aaKnown RBP5.84□□□□□ -1.47
VPS41-203ENST00000395969 AENQ8WTP8 325 aaKnown RBP5.84□□□□□ -1.47
VPS41-203ENST00000395969 TSG101Q99816 390 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 HINFPQ9BQA5 517 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 TSGA10Q9BZW7 698 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 MROH8Q9H579 483 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 ACAD9Q9H845 621 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 KLC4Q9NSK0 619 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 CNTN6Q9UQ52 1028 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 TRPC6Q9Y210 931 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 GDAQ9Y2T3 454 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 BAZ2BQ9UIF8 2168 aaKnown RBP5.84□□□□□ -1.48
VPS41-203ENST00000395969 ASTN2O75129 1339 aaPredicted RBP5.83□□□□□ -1.48
VPS41-203ENST00000395969 GLTPD2A6NH11 291 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 POTECB2RU33 542 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 IPO5O00410 1097 aaKnown RBP5.83□□□□□ -1.48
VPS41-203ENST00000395969 TGFB1I1O43294 461 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 RGS20O76081 388 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 ZBTB48P10074 688 aaPredicted RBP5.83□□□□□ -1.48
VPS41-203ENST00000395969 MYBL2P10244 700 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 NF2P35240 595 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 CCT6AP40227 531 aaKnown RBP5.83□□□□□ -1.48
VPS41-203ENST00000395969 RFC5P40937 340 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 TXKP42681 527 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 ACTN3Q08043 901 aaPredicted RBP5.83□□□□□ -1.48
VPS41-203ENST00000395969 CBLBQ13191 982 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 PABPC4Q13310 644 aaKnown RBP eCLIP5.83□□□□□ -1.48
VPS41-203ENST00000395969 TMEM132BQ14DG7 1078 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 NBPF12Q5TAG4 269 aaPredicted RBP5.83□□□□□ -1.48
VPS41-203ENST00000395969 CDCA2Q69YH5 1023 aaPredicted RBP5.83□□□□□ -1.48
VPS41-203ENST00000395969 C15orf39Q6ZRI6 1047 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 PLPPR4Q7Z2D5 763 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 CDAN1Q8IWY9 1227 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 DAW1Q8N136 415 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 NLGN2Q8NFZ4 835 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 OR8K1Q8NGG5 319 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 TUBGCP2Q9BSJ2 902 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 MOV10L1Q9BXT6 1211 aaKnown RBP5.83□□□□□ -1.48
VPS41-203ENST00000395969 CPVLQ9H3G5 476 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 KCNH7Q9NS40 1196 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 IRAK4Q9NWZ3 460 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 CCPG1Q9ULG6 757 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 GOLGA6BA6NDN3 693 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 POTEMA6NI47 508 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 WDR64B1ANS9 1081 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 B4DLN1 442 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 SOCS7O14512 581 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 MTA2O94776 668 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 NOL4O94818 638 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 SSBP05455 408 aaKnown RBP eCLIP5.83□□□□□ -1.48
VPS41-203ENST00000395969 PLS3P13797 630 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 PRKAR2AP13861 404 aaKnown RBP5.83□□□□□ -1.48
VPS41-203ENST00000395969 RPL13P26373 211 aaKnown RBP5.83□□□□□ -1.48
VPS41-203ENST00000395969 RDXP35241 583 aaKnown RBP5.83□□□□□ -1.48
VPS41-203ENST00000395969 ABL2P42684 1182 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 IREB2P48200 963 aaKnown RBP5.83□□□□□ -1.48
VPS41-203ENST00000395969 RASSF7Q02833 373 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 DRP2Q13474 957 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 PCBP1Q15365 356 aaKnown RBP eCLIP5.83□□□□□ -1.48
VPS41-203ENST00000395969 FAM187BQ17R55 369 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 PAPD7Q5XG87 772 aaKnown RBP5.83□□□□□ -1.48
VPS41-203ENST00000395969 TRMT44Q8IYL2 757 aaKnown RBP5.83□□□□□ -1.48
VPS41-203ENST00000395969 OTUD6BQ8N6M0 293 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 ZNF513Q8N8E2 541 aaPredicted RBP5.83□□□□□ -1.48
VPS41-203ENST00000395969 EHBP1Q8NDI1 1231 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 KIFAP3Q92845 792 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 CNOT6LQ96LI5 555 aaKnown RBP5.83□□□□□ -1.48
VPS41-203ENST00000395969 REEP2Q9BRK0 252 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 CRACR2AQ9BSW2 395 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 GLIS2Q9BZE0 524 aaPredicted RBP5.83□□□□□ -1.48
VPS41-203ENST00000395969 POLD4Q9HCU8 107 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 PICK1Q9NRD5 415 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 G3BP2Q9UN86 482 aaKnown RBP5.83□□□□□ -1.48
VPS41-203ENST00000395969 CLRN2A0PK11 232 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 IQCA1LA6NCM1 817 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 TEX33O43247 280 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 GRIN3BO60391 1043 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 CAND2O75155 1236 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 ZBTB7AO95365 584 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 GARTP22102 1010 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 QARSP47897 775 aaKnown RBP5.83□□□□□ -1.48
VPS41-203ENST00000395969 RARRES1P49788 294 aa5.83□□□□□ -1.48
VPS41-203ENST00000395969 NAP1L1P55209 391 aaKnown RBP5.83□□□□□ -1.48
VPS41-203ENST00000395969 ERVK-24P63145 666 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms