RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 TPH2Q8IWU9 490 aa18.07■□□□□ 0.48
CXCL12-206ENST00000395795 RNF169Q8NCN4 708 aa18.07■□□□□ 0.48
CXCL12-206ENST00000395795 BCL7CQ8WUZ0 217 aaPredicted RBP18.07■□□□□ 0.48
CXCL12-206ENST00000395795 SLC7A3Q8WY07 619 aa18.07■□□□□ 0.48
CXCL12-206ENST00000395795 LLPHQ9BRT6 129 aaKnown RBP18.07■□□□□ 0.48
CXCL12-206ENST00000395795 LRFN3Q9BTN0 628 aa18.07■□□□□ 0.48
CXCL12-206ENST00000395795 PRKAG3Q9UGI9 489 aa18.07■□□□□ 0.48
CXCL12-206ENST00000395795 CD207Q9UJ71 328 aa18.07■□□□□ 0.48
CXCL12-206ENST00000395795 BARX2Q9UMQ3 279 aaPredicted RBP18.07■□□□□ 0.48
CXCL12-206ENST00000395795 PIN4Q9Y237 131 aaKnown RBP18.07■□□□□ 0.48
CXCL12-206ENST00000395795 POTEMA6NI47 508 aa18.06■□□□□ 0.48
CXCL12-206ENST00000395795 EIF5BO60841 1220 aaKnown RBP18.06■□□□□ 0.48
CXCL12-206ENST00000395795 OFD1O75665 1012 aa18.06■□□□□ 0.48
CXCL12-206ENST00000395795 BAG4O95429 457 aaKnown RBP18.06■□□□□ 0.48
CXCL12-206ENST00000395795 TXKP42681 527 aa18.06■□□□□ 0.48
CXCL12-206ENST00000395795 AMHR2Q16671 573 aa18.06■□□□□ 0.48
CXCL12-206ENST00000395795 LONRF3Q496Y0 759 aa18.06■□□□□ 0.48
CXCL12-206ENST00000395795 XKR9Q5GH70 373 aa18.06■□□□□ 0.48
CXCL12-206ENST00000395795 CATSPER4Q7RTX7 472 aa18.06■□□□□ 0.48
CXCL12-206ENST00000395795 SRGAP1Q7Z6B7 1085 aa18.06■□□□□ 0.48
CXCL12-206ENST00000395795 IFNLR1Q8IU57 520 aaPredicted RBP18.06■□□□□ 0.48
CXCL12-206ENST00000395795 ADHFE1Q8IWW8 467 aa18.06■□□□□ 0.48
CXCL12-206ENST00000395795 ASAP3Q8TDY4 903 aa18.06■□□□□ 0.48
CXCL12-206ENST00000395795 PSPC1Q8WXF1 523 aaKnown RBP18.06■□□□□ 0.48
CXCL12-206ENST00000395795 ZNF558Q96NG5 402 aa18.06■□□□□ 0.48
CXCL12-206ENST00000395795 C1QTNF1Q9BXJ1 281 aa18.06■□□□□ 0.48
CXCL12-206ENST00000395795 INO80BQ9C086 356 aaPredicted RBP18.06■□□□□ 0.48
CXCL12-206ENST00000395795 C5orf42Q9H799 3197 aa18.05■□□□□ 0.48
CXCL12-206ENST00000395795 SRGAP2CP0DJJ0 459 aa18.05■□□□□ 0.48
CXCL12-206ENST00000395795 ARL2P36404 184 aa18.05■□□□□ 0.48
CXCL12-206ENST00000395795 RBM25P49756 843 aaKnown RBP18.05■□□□□ 0.48
CXCL12-206ENST00000395795 RARRES1P49788 294 aa18.05■□□□□ 0.48
CXCL12-206ENST00000395795 BCAR1P56945 870 aa18.05■□□□□ 0.48
CXCL12-206ENST00000395795 PTENP60484 403 aa18.05■□□□□ 0.48
CXCL12-206ENST00000395795 TWF2Q6IBS0 349 aaKnown RBP18.05■□□□□ 0.48
CXCL12-206ENST00000395795 TMEM184AQ6ZMB5 413 aa18.05■□□□□ 0.48
CXCL12-206ENST00000395795 OTUD6AQ7L8S5 288 aa18.05■□□□□ 0.48
CXCL12-206ENST00000395795 C4orf32Q8N8J7 132 aa18.05■□□□□ 0.48
CXCL12-206ENST00000395795 FBXO18Q8NFZ0 1043 aa18.05■□□□□ 0.48
CXCL12-206ENST00000395795 VN1R3Q9BXE9 311 aa18.05■□□□□ 0.48
CXCL12-206ENST00000395795 NRDE2Q9H7Z3 1164 aa18.05■□□□□ 0.48
CXCL12-206ENST00000395795 TLE6Q9H808 572 aa18.05■□□□□ 0.48
CXCL12-206ENST00000395795 ANKEF1Q9NU02 776 aa18.05■□□□□ 0.48
CXCL12-206ENST00000395795 TBC1D13Q9NVG8 400 aa18.05■□□□□ 0.48
CXCL12-206ENST00000395795 SPG21Q9NZD8 308 aa18.05■□□□□ 0.48
CXCL12-206ENST00000395795 PCDHB2Q9Y5E7 798 aa18.05■□□□□ 0.48
CXCL12-206ENST00000395795 NT5C1B-RDH14C9J2C7 533 aa18.04■□□□□ 0.48
CXCL12-206ENST00000395795 GAS2O43903 313 aaKnown RBP18.04■□□□□ 0.48
CXCL12-206ENST00000395795 MARCH6O60337 910 aa18.04■□□□□ 0.48
CXCL12-206ENST00000395795 GPR37L1O60883 481 aa18.04■□□□□ 0.48
CXCL12-206ENST00000395795 MED24O75448 989 aa18.04■□□□□ 0.48
CXCL12-206ENST00000395795 MCM7P33993 719 aa18.04■□□□□ 0.48
CXCL12-206ENST00000395795 NDUFV1P49821 464 aa18.04■□□□□ 0.48
CXCL12-206ENST00000395795 PLPP4Q5VZY2 271 aa18.04■□□□□ 0.48
CXCL12-206ENST00000395795 PDE12Q6L8Q7 609 aaKnown RBP18.04■□□□□ 0.48
CXCL12-206ENST00000395795 CATSPER3Q86XQ3 398 aa18.04■□□□□ 0.48
CXCL12-206ENST00000395795 ABI1Q8IZP0 508 aa18.04■□□□□ 0.48
CXCL12-206ENST00000395795 RNF149Q8NC42 400 aa18.04■□□□□ 0.48
CXCL12-206ENST00000395795 SMG8Q8ND04 991 aaKnown RBP18.04■□□□□ 0.48
CXCL12-206ENST00000395795 PIGOQ8TEQ8 1089 aa18.04■□□□□ 0.48
CXCL12-206ENST00000395795 SUSD6Q92537 303 aa18.04■□□□□ 0.48
CXCL12-206ENST00000395795 C8orf76Q96K31 380 aa18.04■□□□□ 0.48
CXCL12-206ENST00000395795 MTRQ99707 1265 aa18.04■□□□□ 0.48
CXCL12-206ENST00000395795 S1PR5Q9H228 398 aa18.04■□□□□ 0.48
CXCL12-206ENST00000395795 FOXP1Q9H334 677 aaPredicted RBP18.04■□□□□ 0.48
CXCL12-206ENST00000395795 FAM86C2PA6NEL3 165 aa18.03■□□□□ 0.48
CXCL12-206ENST00000395795 ASAP2O43150 1006 aa18.03■□□□□ 0.48
CXCL12-206ENST00000395795 TSPAN1O60635 241 aa18.03■□□□□ 0.48
CXCL12-206ENST00000395795 GLRA2P23416 452 aa18.03■□□□□ 0.48
CXCL12-206ENST00000395795 PPM1AP35813 382 aa18.03■□□□□ 0.48
CXCL12-206ENST00000395795 RAB27AP51159 221 aa18.03■□□□□ 0.48
CXCL12-206ENST00000395795 POU5F1BQ06416 359 aa18.03■□□□□ 0.48
CXCL12-206ENST00000395795 CAPSQ13938 189 aa18.03■□□□□ 0.48
CXCL12-206ENST00000395795 TRIM29Q14134 588 aa18.03■□□□□ 0.48
CXCL12-206ENST00000395795 SYCE2Q6PIF2 218 aa18.03■□□□□ 0.48
CXCL12-206ENST00000395795 ZNF280BQ86YH2 543 aa18.03■□□□□ 0.48
CXCL12-206ENST00000395795 EXOC8Q8IYI6 725 aa18.03■□□□□ 0.48
CXCL12-206ENST00000395795 MICAL1Q8TDZ2 1067 aa18.03■□□□□ 0.48
CXCL12-206ENST00000395795 TCP11Q8WWU5 503 aa18.03■□□□□ 0.48
CXCL12-206ENST00000395795 TCF25Q9BQ70 676 aa18.03■□□□□ 0.48
CXCL12-206ENST00000395795 DNAJB4Q9UDY4 337 aa18.03■□□□□ 0.48
CXCL12-206ENST00000395795 C2orf71A6NGG8 1288 aa18.02■□□□□ 0.48
CXCL12-206ENST00000395795 INPPL1O15357 1258 aa18.02■□□□□ 0.48
CXCL12-206ENST00000395795 DDHD2O94830 711 aa18.02■□□□□ 0.48
CXCL12-206ENST00000395795 CD2BP2O95400 341 aaKnown RBP18.02■□□□□ 0.48
CXCL12-206ENST00000395795 GALTP07902 379 aa18.02■□□□□ 0.48
CXCL12-206ENST00000395795 XRCC6P12956 609 aaKnown RBP eCLIP18.02■□□□□ 0.48
CXCL12-206ENST00000395795 ATP2B1P20020 1258 aa18.02■□□□□ 0.48
CXCL12-206ENST00000395795 TOB1P50616 345 aaPredicted RBP18.02■□□□□ 0.48
CXCL12-206ENST00000395795 MBTD1Q05BQ5 628 aa18.02■□□□□ 0.48
CXCL12-206ENST00000395795 ZNF174Q15697 407 aa18.02■□□□□ 0.48
CXCL12-206ENST00000395795 ECM1Q16610 540 aa18.02■□□□□ 0.48
CXCL12-206ENST00000395795 NOMO2Q5JPE7 1267 aa18.02■□□□□ 0.48
CXCL12-206ENST00000395795 MRPL43Q8N983 215 aaKnown RBP18.02■□□□□ 0.48
CXCL12-206ENST00000395795 PPP2R3CQ969Q6 453 aa18.02■□□□□ 0.48
CXCL12-206ENST00000395795 ZSCAN31Q96LW9 406 aaPredicted RBP18.02■□□□□ 0.48
CXCL12-206ENST00000395795 CDCA3Q99618 268 aaPredicted RBP18.02■□□□□ 0.48
CXCL12-206ENST00000395795 EIF2AQ9BY44 585 aaKnown RBP18.02■□□□□ 0.48
CXCL12-206ENST00000395795 MRPL9Q9BYD2 267 aaKnown RBP18.02■□□□□ 0.48
CXCL12-206ENST00000395795 RNF39Q9H2S5 420 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms