RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 LARP4BQ92615 738 aaKnown RBP18.31■□□□□ 0.52
CXCL1-201ENST00000395761 RAD9AQ99638 391 aa18.31■□□□□ 0.52
CXCL1-201ENST00000395761 KIFC3Q9BVG8 833 aa18.31■□□□□ 0.52
CXCL1-201ENST00000395761 NFKBIZQ9BYH8 718 aa18.31■□□□□ 0.52
CXCL1-201ENST00000395761 TTYH1Q9H313 450 aaPredicted RBP18.31■□□□□ 0.52
CXCL1-201ENST00000395761 C1orf112Q9NSG2 853 aa18.31■□□□□ 0.52
CXCL1-201ENST00000395761 PIN4Q9Y237 131 aaKnown RBP18.31■□□□□ 0.52
CXCL1-201ENST00000395761 TSPAN1O60635 241 aa18.3■□□□□ 0.52
CXCL1-201ENST00000395761 PEX3P56589 373 aa18.3■□□□□ 0.52
CXCL1-201ENST00000395761 HTRA4P83105 476 aaPredicted RBP18.3■□□□□ 0.52
CXCL1-201ENST00000395761 CDCA2Q69YH5 1023 aaPredicted RBP18.3■□□□□ 0.52
CXCL1-201ENST00000395761 GPR153Q6NV75 609 aa18.3■□□□□ 0.52
CXCL1-201ENST00000395761 CCDC73Q6ZRK6 1079 aa18.3■□□□□ 0.52
CXCL1-201ENST00000395761 FAM43BQ6ZT52 329 aaPredicted RBP18.3■□□□□ 0.52
CXCL1-201ENST00000395761 IFT74Q96LB3 600 aa18.3■□□□□ 0.52
CXCL1-201ENST00000395761 DRC1Q96MC2 740 aa18.3■□□□□ 0.52
CXCL1-201ENST00000395761 GDPD2Q9HCC8 539 aa18.3■□□□□ 0.52
CXCL1-201ENST00000395761 CHST12Q9NRB3 414 aa18.3■□□□□ 0.52
CXCL1-201ENST00000395761 AGPAT5Q9NUQ2 364 aa18.3■□□□□ 0.52
CXCL1-201ENST00000395761 KCND2Q9NZV8 630 aa18.3■□□□□ 0.52
CXCL1-201ENST00000395761 STK17AQ9UEE5 414 aa18.3■□□□□ 0.52
CXCL1-201ENST00000395761 ADGRA3Q8IWK6 1321 aa18.29■□□□□ 0.52
CXCL1-201ENST00000395761 GBF1Q92538 1859 aa18.29■□□□□ 0.52
CXCL1-201ENST00000395761 CCDC169A6NNP5 214 aa18.29■□□□□ 0.52
CXCL1-201ENST00000395761 B4GALT5O43286 388 aa18.29■□□□□ 0.52
CXCL1-201ENST00000395761 STAT6P42226 847 aa18.29■□□□□ 0.52
CXCL1-201ENST00000395761 NAMPTP43490 491 aa18.29■□□□□ 0.52
CXCL1-201ENST00000395761 NPTX2P47972 431 aa18.29■□□□□ 0.52
CXCL1-201ENST00000395761 GATMP50440 423 aa18.29■□□□□ 0.52
CXCL1-201ENST00000395761 GIT2Q14161 759 aa18.29■□□□□ 0.52
CXCL1-201ENST00000395761 PPP2R5AQ15172 486 aa18.29■□□□□ 0.52
CXCL1-201ENST00000395761 AMHR2Q16671 573 aa18.29■□□□□ 0.52
CXCL1-201ENST00000395761 RESP18Q5W5W9 173 aa18.29■□□□□ 0.52
CXCL1-201ENST00000395761 SPRED2Q7Z698 418 aa18.29■□□□□ 0.52
CXCL1-201ENST00000395761 NPAS4Q8IUM7 802 aa18.29■□□□□ 0.52
CXCL1-201ENST00000395761 DEPTORQ8TB45 409 aa18.29■□□□□ 0.52
CXCL1-201ENST00000395761 FAM161BQ96MY7 647 aa18.29■□□□□ 0.52
CXCL1-201ENST00000395761 REEP2Q9BRK0 252 aa18.29■□□□□ 0.52
CXCL1-201ENST00000395761 TIPINQ9BVW5 301 aa18.29■□□□□ 0.52
CXCL1-201ENST00000395761 SCAND2PQ9GZW5 306 aaPredicted RBP18.29■□□□□ 0.52
CXCL1-201ENST00000395761 SEMA6BQ9H3T3 888 aa18.29■□□□□ 0.52
CXCL1-201ENST00000395761 USP20Q9Y2K6 914 aa18.29■□□□□ 0.52
CXCL1-201ENST00000395761 INSL6Q9Y581 213 aa18.29■□□□□ 0.52
CXCL1-201ENST00000395761 PCDHB7Q9Y5E2 793 aa18.29■□□□□ 0.52
CXCL1-201ENST00000395761 SZT2Q5T011 3432 aa18.29■□□□□ 0.52
CXCL1-201ENST00000395761 TTC3P53804 2025 aa18.28■□□□□ 0.52
CXCL1-201ENST00000395761 DGKIO75912 1065 aa18.28■□□□□ 0.52
CXCL1-201ENST00000395761 ERLIN2O94905 339 aa18.28■□□□□ 0.52
CXCL1-201ENST00000395761 LIG1P18858 919 aa18.28■□□□□ 0.52
CXCL1-201ENST00000395761 E2F4Q16254 413 aa18.28■□□□□ 0.52
CXCL1-201ENST00000395761 TWF2Q6IBS0 349 aaKnown RBP18.28■□□□□ 0.52
CXCL1-201ENST00000395761 SV2BQ7L1I2 683 aa18.28■□□□□ 0.52
CXCL1-201ENST00000395761 ZBTB8OSQ8IWT0 167 aa18.28■□□□□ 0.52
CXCL1-201ENST00000395761 CPB2Q96IY4 423 aa18.28■□□□□ 0.52
CXCL1-201ENST00000395761 YME1L1Q96TA2 773 aa18.28■□□□□ 0.52
CXCL1-201ENST00000395761 CCDC113Q9H0I3 377 aa18.28■□□□□ 0.52
CXCL1-201ENST00000395761 FZD8Q9H461 694 aa18.28■□□□□ 0.52
CXCL1-201ENST00000395761 ZNF576Q9H609 170 aa18.28■□□□□ 0.52
CXCL1-201ENST00000395761 SLC28A3Q9HAS3 691 aa18.28■□□□□ 0.52
CXCL1-201ENST00000395761 RC3H2Q9HBD1 1191 aaKnown RBP18.28■□□□□ 0.52
CXCL1-201ENST00000395761 LRFN2Q9ULH4 789 aa18.28■□□□□ 0.52
CXCL1-201ENST00000395761 A0A0U1RQF3 1178 aa18.27■□□□□ 0.52
CXCL1-201ENST00000395761 MYMKA6NI61 221 aa18.27■□□□□ 0.52
CXCL1-201ENST00000395761 TTLL13PA6NNM8 815 aa18.27■□□□□ 0.52
CXCL1-201ENST00000395761 EDN1P05305 212 aa18.27■□□□□ 0.52
CXCL1-201ENST00000395761 KRT18P05783 430 aaKnown RBP18.27■□□□□ 0.52
CXCL1-201ENST00000395761 STAG3L1P0CL83 205 aa18.27■□□□□ 0.52
CXCL1-201ENST00000395761 PLS3P13797 630 aa18.27■□□□□ 0.52
CXCL1-201ENST00000395761 ARF4P18085 180 aaPredicted RBP18.27■□□□□ 0.52
CXCL1-201ENST00000395761 TAP1Q03518 808 aa18.27■□□□□ 0.52
CXCL1-201ENST00000395761 PCBP1Q15365 356 aaKnown RBP eCLIP18.27■□□□□ 0.52
CXCL1-201ENST00000395761 TPRNQ4KMQ1 711 aa18.27■□□□□ 0.52
CXCL1-201ENST00000395761 UBXN11Q5T124 520 aa18.27■□□□□ 0.52
CXCL1-201ENST00000395761 ZNF697Q5TEC3 545 aa18.27■□□□□ 0.52
CXCL1-201ENST00000395761 PPP2R2DQ66LE6 453 aa18.27■□□□□ 0.52
CXCL1-201ENST00000395761 ADALQ6DHV7 355 aa18.27■□□□□ 0.52
CXCL1-201ENST00000395761 ECHDC2Q86YB7 292 aa18.27■□□□□ 0.52
CXCL1-201ENST00000395761 DEFB123Q8N688 67 aa18.27■□□□□ 0.52
CXCL1-201ENST00000395761 STAMQ92783 540 aa18.27■□□□□ 0.52
CXCL1-201ENST00000395761 DHX58Q96C10 678 aa18.27■□□□□ 0.52
CXCL1-201ENST00000395761 ZNF689Q96CS4 500 aaPredicted RBP18.27■□□□□ 0.52
CXCL1-201ENST00000395761 C2orf40Q9H1Z8 148 aa18.27■□□□□ 0.52
CXCL1-201ENST00000395761 KMT5AQ9NQR1 393 aa18.27■□□□□ 0.52
CXCL1-201ENST00000395761 TMEM161AQ9NX61 479 aa18.27■□□□□ 0.52
CXCL1-201ENST00000395761 DACT1Q9NYF0 836 aa18.27■□□□□ 0.52
CXCL1-201ENST00000395761 CHD9Q3L8U1 2897 aa18.26■□□□□ 0.51
CXCL1-201ENST00000395761 SLC16A4O15374 487 aa18.26■□□□□ 0.51
CXCL1-201ENST00000395761 POLR2DO15514 142 aaKnown RBP18.26■□□□□ 0.51
CXCL1-201ENST00000395761 FGFR1P11362 822 aa18.26■□□□□ 0.51
CXCL1-201ENST00000395761 ATF7P17544 494 aaPredicted RBP18.26■□□□□ 0.51
CXCL1-201ENST00000395761 CMA1P23946 247 aa18.26■□□□□ 0.51
CXCL1-201ENST00000395761 DMP1Q13316 513 aaPredicted RBP18.26■□□□□ 0.51
CXCL1-201ENST00000395761 FAM187BQ17R55 369 aa18.26■□□□□ 0.51
CXCL1-201ENST00000395761 LONRF3Q496Y0 759 aa18.26■□□□□ 0.51
CXCL1-201ENST00000395761 PPP4R3CPQ6ZMV5 832 aa18.26■□□□□ 0.51
CXCL1-201ENST00000395761 DYMQ7RTS9 669 aa18.26■□□□□ 0.51
CXCL1-201ENST00000395761 ZNF598Q86UK7 904 aaKnown RBP18.26■□□□□ 0.51
CXCL1-201ENST00000395761 CDR2LQ86X02 465 aaPredicted RBP18.26■□□□□ 0.51
CXCL1-201ENST00000395761 RNF169Q8NCN4 708 aa18.26■□□□□ 0.51
CXCL1-201ENST00000395761 SP7Q8TDD2 431 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms