RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 NFKBIZQ9BYH8 718 aa22.02■■□□□ 1.12
SNCA-203ENST00000394986 SCAND2PQ9GZW5 306 aaPredicted RBP22.02■■□□□ 1.12
SNCA-203ENST00000394986 AGPAT5Q9NUQ2 364 aa22.02■■□□□ 1.12
SNCA-203ENST00000394986 KCND2Q9NZV8 630 aa22.02■■□□□ 1.12
SNCA-203ENST00000394986 MSRAQ9UJ68 235 aa22.02■■□□□ 1.12
SNCA-203ENST00000394986 PCDHA11Q9Y5I1 949 aa22.02■■□□□ 1.12
SNCA-203ENST00000394986 CCDC169A6NNP5 214 aa22.01■■□□□ 1.11
SNCA-203ENST00000394986 C9IYK1 514 aa22.01■■□□□ 1.11
SNCA-203ENST00000394986 B4GALT5O43286 388 aa22.01■■□□□ 1.11
SNCA-203ENST00000394986 TSPAN1O60635 241 aa22.01■■□□□ 1.11
SNCA-203ENST00000394986 CA3P07451 260 aa22.01■■□□□ 1.11
SNCA-203ENST00000394986 ZSCAN20P17040 1043 aaPredicted RBP22.01■■□□□ 1.11
SNCA-203ENST00000394986 LIG1P18858 919 aa22.01■■□□□ 1.11
SNCA-203ENST00000394986 NPTX2P47972 431 aa22.01■■□□□ 1.11
SNCA-203ENST00000394986 SARSP49591 514 aaKnown RBP22.01■■□□□ 1.11
SNCA-203ENST00000394986 PPP2R5AQ15172 486 aa22.01■■□□□ 1.11
SNCA-203ENST00000394986 RAB30Q15771 203 aa22.01■■□□□ 1.11
SNCA-203ENST00000394986 E2F4Q16254 413 aa22.01■■□□□ 1.11
SNCA-203ENST00000394986 AMHR2Q16671 573 aa22.01■■□□□ 1.11
SNCA-203ENST00000394986 DEPTORQ8TB45 409 aa22.01■■□□□ 1.11
SNCA-203ENST00000394986 DHX58Q96C10 678 aa22.01■■□□□ 1.11
SNCA-203ENST00000394986 CPB2Q96IY4 423 aa22.01■■□□□ 1.11
SNCA-203ENST00000394986 TIPINQ9BVW5 301 aa22.01■■□□□ 1.11
SNCA-203ENST00000394986 SZT2Q5T011 3432 aa22■■□□□ 1.11
SNCA-203ENST00000394986 ERLIN2O94905 339 aa22■■□□□ 1.11
SNCA-203ENST00000394986 KRT18P05783 430 aaKnown RBP22■■□□□ 1.11
SNCA-203ENST00000394986 GIT2Q14161 759 aa22■■□□□ 1.11
SNCA-203ENST00000394986 SLC24A5Q71RS6 500 aa22■■□□□ 1.11
SNCA-203ENST00000394986 Q7L0L9 218 aa22■■□□□ 1.11
SNCA-203ENST00000394986 ZBTB8OSQ8IWT0 167 aa22■■□□□ 1.11
SNCA-203ENST00000394986 STAMQ92783 540 aa22■■□□□ 1.11
SNCA-203ENST00000394986 C1orf112Q9NSG2 853 aa22■■□□□ 1.11
SNCA-203ENST00000394986 FAM13BQ9NYF5 915 aa22■■□□□ 1.11
SNCA-203ENST00000394986 USP20Q9Y2K6 914 aa22■■□□□ 1.11
SNCA-203ENST00000394986 MYMKA6NI61 221 aa21.99■■□□□ 1.11
SNCA-203ENST00000394986 EDN1P05305 212 aa21.99■■□□□ 1.11
SNCA-203ENST00000394986 HOXA11P31270 313 aaPredicted RBP21.99■■□□□ 1.11
SNCA-203ENST00000394986 GATMP50440 423 aa21.99■■□□□ 1.11
SNCA-203ENST00000394986 DMP1Q13316 513 aaPredicted RBP21.99■■□□□ 1.11
SNCA-203ENST00000394986 TWF2Q6IBS0 349 aaKnown RBP21.99■■□□□ 1.11
SNCA-203ENST00000394986 SV2BQ7L1I2 683 aa21.99■■□□□ 1.11
SNCA-203ENST00000394986 DYMQ7RTS9 669 aa21.99■■□□□ 1.11
SNCA-203ENST00000394986 SPRED2Q7Z698 418 aa21.99■■□□□ 1.11
SNCA-203ENST00000394986 NPAS4Q8IUM7 802 aa21.99■■□□□ 1.11
SNCA-203ENST00000394986 CRIPAKQ8N1N5 446 aa21.99■■□□□ 1.11
SNCA-203ENST00000394986 RAD9AQ99638 391 aa21.99■■□□□ 1.11
SNCA-203ENST00000394986 CCDC113Q9H0I3 377 aa21.99■■□□□ 1.11
SNCA-203ENST00000394986 TTYH1Q9H313 450 aaPredicted RBP21.99■■□□□ 1.11
SNCA-203ENST00000394986 CHMP5Q9NZZ3 219 aa21.99■■□□□ 1.11
SNCA-203ENST00000394986 A0A1B0GVL5 298 aa21.98■■□□□ 1.11
SNCA-203ENST00000394986 TTLL13PA6NNM8 815 aa21.98■■□□□ 1.11
SNCA-203ENST00000394986 SLC16A4O15374 487 aa21.98■■□□□ 1.11
SNCA-203ENST00000394986 POLR2DO15514 142 aaKnown RBP21.98■■□□□ 1.11
SNCA-203ENST00000394986 PLS3P13797 630 aa21.98■■□□□ 1.11
SNCA-203ENST00000394986 HTRA4P83105 476 aaPredicted RBP21.98■■□□□ 1.11
SNCA-203ENST00000394986 ADALQ6DHV7 355 aa21.98■■□□□ 1.11
SNCA-203ENST00000394986 CDR2LQ86X02 465 aaPredicted RBP21.98■■□□□ 1.11
SNCA-203ENST00000394986 FAM161BQ96MY7 647 aa21.98■■□□□ 1.11
SNCA-203ENST00000394986 YME1L1Q96TA2 773 aa21.98■■□□□ 1.11
SNCA-203ENST00000394986 C2orf40Q9H1Z8 148 aa21.98■■□□□ 1.11
SNCA-203ENST00000394986 ZHX3Q9H4I2 956 aa21.98■■□□□ 1.11
SNCA-203ENST00000394986 KMT5AQ9NQR1 393 aa21.98■■□□□ 1.11
SNCA-203ENST00000394986 CHST12Q9NRB3 414 aa21.98■■□□□ 1.11
SNCA-203ENST00000394986 LRFN2Q9ULH4 789 aa21.98■■□□□ 1.11
SNCA-203ENST00000394986 ODF2LQ9ULJ1 636 aa21.98■■□□□ 1.11
SNCA-203ENST00000394986 FAM13AO94988 1023 aa21.97■■□□□ 1.11
SNCA-203ENST00000394986 PRKCBP05771 671 aa21.97■■□□□ 1.11
SNCA-203ENST00000394986 PFKFB1P16118 471 aa21.97■■□□□ 1.11
SNCA-203ENST00000394986 LONRF3Q496Y0 759 aa21.97■■□□□ 1.11
SNCA-203ENST00000394986 ECHDC2Q86YB7 292 aa21.97■■□□□ 1.11
SNCA-203ENST00000394986 RNF169Q8NCN4 708 aa21.97■■□□□ 1.11
SNCA-203ENST00000394986 DDX12PQ92771 950 aa21.97■■□□□ 1.11
SNCA-203ENST00000394986 FZD8Q9H461 694 aa21.97■■□□□ 1.11
SNCA-203ENST00000394986 RC3H2Q9HBD1 1191 aaKnown RBP21.97■■□□□ 1.11
SNCA-203ENST00000394986 DACT1Q9NYF0 836 aa21.97■■□□□ 1.11
SNCA-203ENST00000394986 KCNH3Q9ULD8 1083 aa21.97■■□□□ 1.11
SNCA-203ENST00000394986 GBF1Q92538 1859 aa21.97■■□□□ 1.11
SNCA-203ENST00000394986 TBCAO75347 108 aaKnown RBP21.97■■□□□ 1.11
SNCA-203ENST00000394986 FGFR1P11362 822 aa21.97■■□□□ 1.11
SNCA-203ENST00000394986 ATF7P17544 494 aaPredicted RBP21.97■■□□□ 1.11
SNCA-203ENST00000394986 ARF4P18085 180 aaPredicted RBP21.97■■□□□ 1.11
SNCA-203ENST00000394986 CMA1P23946 247 aa21.97■■□□□ 1.11
SNCA-203ENST00000394986 FAM189BP81408 668 aa21.97■■□□□ 1.11
SNCA-203ENST00000394986 UBXN11Q5T124 520 aa21.97■■□□□ 1.11
SNCA-203ENST00000394986 PPP2R2DQ66LE6 453 aa21.97■■□□□ 1.11
SNCA-203ENST00000394986 TAS1R3Q7RTX0 852 aa21.97■■□□□ 1.11
SNCA-203ENST00000394986 IQUBQ8NA54 791 aa21.97■■□□□ 1.11
SNCA-203ENST00000394986 SLC28A3Q9HAS3 691 aa21.97■■□□□ 1.11
SNCA-203ENST00000394986 PRMT7Q9NVM4 692 aaPredicted RBP21.97■■□□□ 1.11
SNCA-203ENST00000394986 ARHGAP28Q9P2N2 729 aa21.97■■□□□ 1.11
SNCA-203ENST00000394986 INSL6Q9Y581 213 aa21.97■■□□□ 1.11
SNCA-203ENST00000394986 PCDHB7Q9Y5E2 793 aa21.97■■□□□ 1.11
SNCA-203ENST00000394986 COL4A6Q14031 1691 aa21.96■■□□□ 1.11
SNCA-203ENST00000394986 A0A0U1RQF3 1178 aa21.96■■□□□ 1.11
SNCA-203ENST00000394986 DGKIO75912 1065 aa21.96■■□□□ 1.11
SNCA-203ENST00000394986 STAG3L1P0CL83 205 aa21.96■■□□□ 1.11
SNCA-203ENST00000394986 ZNF131P52739 623 aa21.96■■□□□ 1.11
SNCA-203ENST00000394986 MAPK6Q16659 721 aa21.96■■□□□ 1.11
SNCA-203ENST00000394986 PAN2Q504Q3 1202 aaKnown RBP21.96■■□□□ 1.11
SNCA-203ENST00000394986 ZNF697Q5TEC3 545 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms