RNA–Protein interactions for RNA: ENST00000394828.6

PPP3CB-203, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-203ENST00000394828 EPAS1Q99814 870 aa12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 NT5C3AQ9H0P0 336 aa12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 TMOD4Q9NZQ9 345 aa12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 SPDYE16A6NNV3 312 aaPredicted RBP12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 SLC26A4O43511 780 aa12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 COPB1P53618 953 aaKnown RBP12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 PSMC6P62333 389 aa12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 EHHADHQ08426 723 aa12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 PDE4DQ08499 809 aa12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 SLC5A9Q2M3M2 681 aa12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 SLC30A9Q6PML9 568 aa12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 DNAJC19Q96DA6 116 aa12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 TSGA10Q9BZW7 698 aa12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 EXOC1Q9NV70 894 aa12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 KIAA1217Q5T5P2 1943 aa12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 RPA1P27694 616 aa12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 CTCFP49711 727 aaPredicted RBP12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 MRPS9P82933 396 aaKnown RBP12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 PTPROQ16827 1216 aa12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 ODF2Q5BJF6 829 aa12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 C8orf74Q6P047 294 aa12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 RPUSD2Q8IZ73 545 aaKnown RBP12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 CACNA2D3Q8IZS8 1091 aa12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 B4GALNT2Q8NHY0 566 aa12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 ZC3H15Q8WU90 426 aaKnown RBP12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 CCT6BQ92526 530 aa12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 RAPGEF5Q92565 580 aa12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 EZH1Q92800 747 aaPredicted RBP12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 MXRA8Q9BRK3 442 aa12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 AGAP1Q9UPQ3 857 aa12.84□□□□□ -0.35
PPP3CB-203ENST00000394828 DPPA5A6NC42 116 aa12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 ZNF263O14978 683 aa12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 FECHP22830 423 aa12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 OAZ1P54368 228 aa12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 SLC12A3P55017 1021 aa12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 PPP2R5CQ13362 524 aa12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 SNRNP48Q6IEG0 339 aaKnown RBP12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 CCDC70Q6NSX1 233 aa12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 UNC13DQ70J99 1090 aa12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 CCDC50Q8IVM0 306 aa12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 TAF1DQ9H5J8 278 aaPredicted RBP12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 ELP3Q9H9T3 547 aa12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 RNF146Q9NTX7 359 aa12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 MAP3K20Q9NYL2 800 aaKnown RBP12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 CSADQ9Y600 493 aa12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 ATP2A1O14983 1001 aa12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 NKRFO15226 690 aaKnown RBP eCLIP12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 PDHA1P08559 390 aa12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 PGM5Q15124 567 aa12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 PCNX4Q63HM2 1172 aa12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 B3GNT9Q6UX72 402 aa12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 CPLX4Q7Z7G2 160 aa12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 DDX42Q86XP3 938 aaKnown RBP eCLIP12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 RBM46Q8TBY0 533 aaKnown RBP12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 MAGEC3Q8TD91 643 aa12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 EIF2AK1Q9BQI3 630 aaKnown RBP12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 WDR11Q9BZH6 1224 aa12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 PAPOLBQ9NRJ5 636 aaKnown RBP12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 SNX12Q9UMY4 172 aa12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 CTDP1Q9Y5B0 961 aaPredicted RBP12.83□□□□□ -0.36
PPP3CB-203ENST00000394828 NPHP3-ACAD11A0A0J9YXS1 232 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 PVALEFA0A1B0GWK0 134 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 EVI5O60447 810 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 PEX10O60683 326 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 SMIM24O75264 130 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 HEXIM1O94992 359 aaKnown RBP12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 PLA2G4BP0C869 781 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 IREB2P48200 963 aaKnown RBP12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 ARSHQ5FYA8 562 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 RNF207Q6ZRF8 634 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 SAMD3Q8N6K7 520 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 OSBPL1AQ9BXW6 950 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 RGL1Q9NZL6 768 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 STK38LQ9Y2H1 464 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 WDR81Q562E7 1941 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 TRAPPC3O43617 180 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 RTN3O95197 1032 aaPredicted RBP12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 EIF2AK2P19525 551 aaKnown RBP12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 ATP4AP20648 1035 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 PAPOLAP51003 745 aaKnown RBP12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 CYP4A11Q02928 519 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 COBLL1Q53SF7 1204 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 EMBQ6PCB8 327 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 MMGT1Q8N4V1 131 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 CCDC63Q8NA47 563 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 TRIM58Q8NG06 486 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 ZNF577Q9BSK1 485 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 UNC45AQ9H3U1 944 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 PXMP2Q9NR77 195 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 SLC5A4Q9NY91 659 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 RABGAP1Q9Y3P9 1069 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 UBIAD1Q9Y5Z9 338 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 DOCK5Q9H7D0 1870 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 CYP11B2P19099 503 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 EAPPQ56P03 285 aaPredicted RBP12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 PPP1R15BQ5SWA1 713 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 TTI2Q6NXR4 508 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 NSMFQ6X4W1 530 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 IRF2BP1Q8IU81 584 aa12.82□□□□□ -0.36
PPP3CB-203ENST00000394828 DRAXINQ8NBI3 349 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms