RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 VPS54Q9P1Q0 977 aa17.31■□□□□ 0.36
CHMP3-202ENST00000393773 DBR1Q9UK59 544 aaKnown RBP17.31■□□□□ 0.36
CHMP3-202ENST00000393773 SFPQP23246 707 aaKnown RBP eCLIP17.3■□□□□ 0.36
CHMP3-202ENST00000393773 FGD1P98174 961 aa17.3■□□□□ 0.36
CHMP3-202ENST00000393773 GIT2Q14161 759 aa17.3■□□□□ 0.36
CHMP3-202ENST00000393773 PTPN14Q15678 1187 aa17.3■□□□□ 0.36
CHMP3-202ENST00000393773 TWF2Q6IBS0 349 aaKnown RBP17.3■□□□□ 0.36
CHMP3-202ENST00000393773 RDM1Q8NG50 284 aa17.3■□□□□ 0.36
CHMP3-202ENST00000393773 SH2D3AQ9BRG2 576 aa17.3■□□□□ 0.36
CHMP3-202ENST00000393773 AGXT2Q9BYV1 514 aa17.3■□□□□ 0.36
CHMP3-202ENST00000393773 FAM105AQ9NUU6 356 aa17.3■□□□□ 0.36
CHMP3-202ENST00000393773 DNAJB4Q9UDY4 337 aa17.3■□□□□ 0.36
CHMP3-202ENST00000393773 PIN4Q9Y237 131 aaKnown RBP17.3■□□□□ 0.36
CHMP3-202ENST00000393773 CARNS1A5YM72 827 aa17.29■□□□□ 0.36
CHMP3-202ENST00000393773 GALTP07902 379 aa17.29■□□□□ 0.36
CHMP3-202ENST00000393773 SLC11A1P49279 550 aa17.29■□□□□ 0.36
CHMP3-202ENST00000393773 USP11P51784 963 aa17.29■□□□□ 0.36
CHMP3-202ENST00000393773 BMS1Q14692 1282 aaKnown RBP17.29■□□□□ 0.36
CHMP3-202ENST00000393773 LONRF3Q496Y0 759 aa17.29■□□□□ 0.36
CHMP3-202ENST00000393773 Q4G0T1 1027 aa17.29■□□□□ 0.36
CHMP3-202ENST00000393773 XKR3Q5GH77 459 aa17.29■□□□□ 0.36
CHMP3-202ENST00000393773 NOMO2Q5JPE7 1267 aa17.29■□□□□ 0.36
CHMP3-202ENST00000393773 GLB1LQ6UWU2 654 aa17.29■□□□□ 0.36
CHMP3-202ENST00000393773 ZNF410Q86VK4 478 aa17.29■□□□□ 0.36
CHMP3-202ENST00000393773 FBXL16Q8N461 479 aa17.29■□□□□ 0.36
CHMP3-202ENST00000393773 SFXN1Q9H9B4 322 aa17.29■□□□□ 0.36
CHMP3-202ENST00000393773 LIMD1Q9UGP4 676 aa17.29■□□□□ 0.36
CHMP3-202ENST00000393773 INPP5FQ9Y2H2 1132 aa17.29■□□□□ 0.36
CHMP3-202ENST00000393773 FANCMQ8IYD8 2048 aa17.29■□□□□ 0.36
CHMP3-202ENST00000393773 CDC45O75419 566 aa17.28■□□□□ 0.36
CHMP3-202ENST00000393773 OFD1O75665 1012 aa17.28■□□□□ 0.36
CHMP3-202ENST00000393773 TDP2O95551 362 aa17.28■□□□□ 0.36
CHMP3-202ENST00000393773 SKIP12755 728 aa17.28■□□□□ 0.36
CHMP3-202ENST00000393773 IFNAR1P17181 557 aa17.28■□□□□ 0.36
CHMP3-202ENST00000393773 RAB27AP51159 221 aa17.28■□□□□ 0.36
CHMP3-202ENST00000393773 CDC42EP1Q00587 391 aa17.28■□□□□ 0.36
CHMP3-202ENST00000393773 ATAT1Q5SQI0 421 aa17.28■□□□□ 0.36
CHMP3-202ENST00000393773 TMC5Q6UXY8 1006 aa17.28■□□□□ 0.36
CHMP3-202ENST00000393773 MIER3Q7Z3K6 550 aa17.28■□□□□ 0.36
CHMP3-202ENST00000393773 CABP7Q86V35 215 aa17.28■□□□□ 0.36
CHMP3-202ENST00000393773 PLCD3Q8N3E9 789 aa17.28■□□□□ 0.36
CHMP3-202ENST00000393773 TBCKQ8TEA7 893 aa17.28■□□□□ 0.36
CHMP3-202ENST00000393773 JAKMIP1Q96N16 626 aaKnown RBP17.28■□□□□ 0.36
CHMP3-202ENST00000393773 SLC26A6Q9BXS9 759 aa17.28■□□□□ 0.36
CHMP3-202ENST00000393773 CYP26B1Q9NR63 512 aa17.28■□□□□ 0.36
CHMP3-202ENST00000393773 AGPAT5Q9NUQ2 364 aa17.28■□□□□ 0.36
CHMP3-202ENST00000393773 ZNF623O75123 536 aa17.27■□□□□ 0.36
CHMP3-202ENST00000393773 MAFO75444 373 aaPredicted RBP17.27■□□□□ 0.36
CHMP3-202ENST00000393773 CLCN5P51795 746 aa17.27■□□□□ 0.36
CHMP3-202ENST00000393773 ANO5Q75V66 913 aa17.27■□□□□ 0.36
CHMP3-202ENST00000393773 GPR149Q86SP6 731 aa17.27■□□□□ 0.36
CHMP3-202ENST00000393773 ZNF280BQ86YH2 543 aa17.27■□□□□ 0.36
CHMP3-202ENST00000393773 RHPN2Q8IUC4 686 aa17.27■□□□□ 0.36
CHMP3-202ENST00000393773 KSR1Q8IVT5 923 aa17.27■□□□□ 0.36
CHMP3-202ENST00000393773 ETNPPLQ8TBG4 499 aa17.27■□□□□ 0.36
CHMP3-202ENST00000393773 MBOAT7Q96N66 472 aa17.27■□□□□ 0.36
CHMP3-202ENST00000393773 GBP3Q9H0R5 595 aa17.27■□□□□ 0.36
CHMP3-202ENST00000393773 MFSD1Q9H3U5 465 aa17.27■□□□□ 0.36
CHMP3-202ENST00000393773 SH3GLB2Q9NR46 395 aa17.27■□□□□ 0.36
CHMP3-202ENST00000393773 SUCLA2Q9P2R7 463 aaPredicted RBP17.27■□□□□ 0.36
CHMP3-202ENST00000393773 SNX14Q9Y5W7 946 aa17.27■□□□□ 0.36
CHMP3-202ENST00000393773 CYP3A7-CYP3A51PA0A087WV96 503 aa17.26■□□□□ 0.35
CHMP3-202ENST00000393773 M0R2N6 131 aa17.26■□□□□ 0.35
CHMP3-202ENST00000393773 RPS6KB1P23443 525 aa17.26■□□□□ 0.35
CHMP3-202ENST00000393773 CYP3A7P24462 503 aa17.26■□□□□ 0.35
CHMP3-202ENST00000393773 CLCN4P51793 760 aa17.26■□□□□ 0.35
CHMP3-202ENST00000393773 AFF1P51825 1210 aaKnown RBP17.26■□□□□ 0.35
CHMP3-202ENST00000393773 AKAP17AQ02040 695 aaKnown RBP17.26■□□□□ 0.35
CHMP3-202ENST00000393773 RNASELQ05823 741 aaKnown RBP17.26■□□□□ 0.35
CHMP3-202ENST00000393773 PLA2G4FQ68DD2 849 aa17.26■□□□□ 0.35
CHMP3-202ENST00000393773 BLOC1S2Q6QNY1 142 aa17.26■□□□□ 0.35
CHMP3-202ENST00000393773 CCDC149Q6ZUS6 474 aa17.26■□□□□ 0.35
CHMP3-202ENST00000393773 CATSPER4Q7RTX7 472 aa17.26■□□□□ 0.35
CHMP3-202ENST00000393773 FRMD5Q7Z6J6 570 aa17.26■□□□□ 0.35
CHMP3-202ENST00000393773 PPFIBP1Q86W92 1011 aa17.26■□□□□ 0.35
CHMP3-202ENST00000393773 NLRP4Q96MN2 994 aa17.26■□□□□ 0.35
CHMP3-202ENST00000393773 INO80BQ9C086 356 aaPredicted RBP17.26■□□□□ 0.35
CHMP3-202ENST00000393773 IFT122Q9HBG6 1241 aa17.26■□□□□ 0.35
CHMP3-202ENST00000393773 NCOA5Q9HCD5 579 aaKnown RBP17.26■□□□□ 0.35
CHMP3-202ENST00000393773 DUSP12Q9UNI6 340 aa17.26■□□□□ 0.35
CHMP3-202ENST00000393773 MYH15Q9Y2K3 1946 aa17.25■□□□□ 0.35
CHMP3-202ENST00000393773 LILRB3O75022 631 aa17.25■□□□□ 0.35
CHMP3-202ENST00000393773 DDHD2O94830 711 aa17.25■□□□□ 0.35
CHMP3-202ENST00000393773 NPR3P17342 541 aa17.25■□□□□ 0.35
CHMP3-202ENST00000393773 AOC1P19801 751 aa17.25■□□□□ 0.35
CHMP3-202ENST00000393773 HSPA4P34932 840 aa17.25■□□□□ 0.35
CHMP3-202ENST00000393773 DNM2P50570 870 aa17.25■□□□□ 0.35
CHMP3-202ENST00000393773 EVCP57679 992 aa17.25■□□□□ 0.35
CHMP3-202ENST00000393773 NPY5RQ15761 445 aa17.25■□□□□ 0.35
CHMP3-202ENST00000393773 AGMOQ6ZNB7 445 aa17.25■□□□□ 0.35
CHMP3-202ENST00000393773 TMEM87AQ8NBN3 555 aa17.25■□□□□ 0.35
CHMP3-202ENST00000393773 KLHL5Q96PQ7 755 aa17.25■□□□□ 0.35
CHMP3-202ENST00000393773 MIA3Q5JRA6 1907 aa17.24■□□□□ 0.35
CHMP3-202ENST00000393773 N4BP1O75113 896 aaKnown RBP17.24■□□□□ 0.35
CHMP3-202ENST00000393773 CNPP09543 421 aaKnown RBP17.24■□□□□ 0.35
CHMP3-202ENST00000393773 NLRP5P59047 1200 aa17.24■□□□□ 0.35
CHMP3-202ENST00000393773 TDGQ13569 410 aa17.24■□□□□ 0.35
CHMP3-202ENST00000393773 UBXN11Q5T124 520 aa17.24■□□□□ 0.35
CHMP3-202ENST00000393773 MOXD1Q6UVY6 613 aa17.24■□□□□ 0.35
CHMP3-202ENST00000393773 C15orf39Q6ZRI6 1047 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms