RNA–Protein interactions for RNA: ENST00000393577.7

HMGA2-202, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3 BASIC

Gene HMGA2, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-202ENST00000393577 PADI6Q6TGC4 694 aa25.71■■□□□ 1.71
HMGA2-202ENST00000393577 MCPH1Q8NEM0 835 aa25.71■■□□□ 1.71
HMGA2-202ENST00000393577 HELQQ8TDG4 1101 aa25.71■■□□□ 1.71
HMGA2-202ENST00000393577 COL25A1Q9BXS0 654 aaPredicted RBP25.71■■□□□ 1.71
HMGA2-202ENST00000393577 CWH43Q9H720 699 aa25.71■■□□□ 1.71
HMGA2-202ENST00000393577 COG5Q9UP83 839 aa25.71■■□□□ 1.71
HMGA2-202ENST00000393577 KIAA1024Q9UPX6 916 aa25.71■■□□□ 1.71
HMGA2-202ENST00000393577 SPTBN5Q9NRC6 3674 aaKnown RBP25.71■■□□□ 1.71
HMGA2-202ENST00000393577 VCANP13611 3396 aa25.7■■□□□ 1.7
HMGA2-202ENST00000393577 INO80B-WBP1J3KQ70 363 aa25.7■■□□□ 1.7
HMGA2-202ENST00000393577 ERLIN2O94905 339 aa25.7■■□□□ 1.7
HMGA2-202ENST00000393577 SKIP12755 728 aa25.7■■□□□ 1.7
HMGA2-202ENST00000393577 CDC25AP30304 524 aa25.7■■□□□ 1.7
HMGA2-202ENST00000393577 LONRF3Q496Y0 759 aa25.7■■□□□ 1.7
HMGA2-202ENST00000393577 KRT79Q5XKE5 535 aa25.7■■□□□ 1.7
HMGA2-202ENST00000393577 IFNLR1Q8IU57 520 aaPredicted RBP25.7■■□□□ 1.7
HMGA2-202ENST00000393577 LRRC43Q8N309 656 aa25.7■■□□□ 1.7
HMGA2-202ENST00000393577 COLGALT1Q8NBJ5 622 aa25.7■■□□□ 1.7
HMGA2-202ENST00000393577 LPPQ93052 612 aa25.7■■□□□ 1.7
HMGA2-202ENST00000393577 HLA-CQ95604 372 aa25.7■■□□□ 1.7
HMGA2-202ENST00000393577 ASB2Q96Q27 587 aa25.7■■□□□ 1.7
HMGA2-202ENST00000393577 NSUN3Q9H649 340 aaKnown RBP25.7■■□□□ 1.7
HMGA2-202ENST00000393577 AAASQ9NRG9 546 aa25.7■■□□□ 1.7
HMGA2-202ENST00000393577 DDX19AQ9NUU7 478 aaKnown RBP25.7■■□□□ 1.7
HMGA2-202ENST00000393577 PCDHB12Q9Y5F1 795 aa25.7■■□□□ 1.7
HMGA2-202ENST00000393577 XIRP2A4UGR9 3374 aa25.69■■□□□ 1.7
HMGA2-202ENST00000393577 BRWD1Q9NSI6 2320 aa25.69■■□□□ 1.7
HMGA2-202ENST00000393577 K7ELQ4 463 aaPredicted RBP25.69■■□□□ 1.7
HMGA2-202ENST00000393577 HOXA11P31270 313 aaPredicted RBP25.69■■□□□ 1.7
HMGA2-202ENST00000393577 RAB27AP51159 221 aa25.69■■□□□ 1.7
HMGA2-202ENST00000393577 POU5F1BQ06416 359 aa25.69■■□□□ 1.7
HMGA2-202ENST00000393577 TCEAL5Q5H9L2 206 aa25.69■■□□□ 1.7
HMGA2-202ENST00000393577 LRRC55Q6ZSA7 311 aa25.69■■□□□ 1.7
HMGA2-202ENST00000393577 BRAPQ7Z569 592 aa25.69■■□□□ 1.7
HMGA2-202ENST00000393577 TSPAN1O60635 241 aa25.68■■□□□ 1.7
HMGA2-202ENST00000393577 LAG3P18627 525 aa25.68■■□□□ 1.7
HMGA2-202ENST00000393577 CYP11B2P19099 503 aa25.68■■□□□ 1.7
HMGA2-202ENST00000393577 PDCP20941 246 aa25.68■■□□□ 1.7
HMGA2-202ENST00000393577 DNAJB1P25685 340 aa25.68■■□□□ 1.7
HMGA2-202ENST00000393577 MBTD1Q05BQ5 628 aa25.68■■□□□ 1.7
HMGA2-202ENST00000393577 SPPL3Q8TCT6 385 aa25.68■■□□□ 1.7
HMGA2-202ENST00000393577 BHMT2Q9H2M3 363 aa25.68■■□□□ 1.7
HMGA2-202ENST00000393577 FOXD4L1Q9NU39 408 aa25.68■■□□□ 1.7
HMGA2-202ENST00000393577 VWA3AA6NCI4 1184 aa25.67■■□□□ 1.7
HMGA2-202ENST00000393577 LRRIQ4A6NIV6 560 aa25.67■■□□□ 1.7
HMGA2-202ENST00000393577 ZNF623O75123 536 aa25.67■■□□□ 1.7
HMGA2-202ENST00000393577 PCBP1Q15365 356 aaKnown RBP eCLIP25.67■■□□□ 1.71e-6■■■□□ 16.3
HMGA2-202ENST00000393577 THNSL1Q8IYQ7 743 aa25.67■■□□□ 1.7
HMGA2-202ENST00000393577 POF1BQ8WVV4 589 aa25.67■■□□□ 1.7
HMGA2-202ENST00000393577 INTS4Q96HW7 963 aaKnown RBP25.67■■□□□ 1.7
HMGA2-202ENST00000393577 CPB2Q96IY4 423 aa25.67■■□□□ 1.7
HMGA2-202ENST00000393577 MMTAG2Q9BU76 263 aaKnown RBP25.67■■□□□ 1.7
HMGA2-202ENST00000393577 NFKBIZQ9BYH8 718 aa25.67■■□□□ 1.7
HMGA2-202ENST00000393577 PCDHB2Q9Y5E7 798 aa25.67■■□□□ 1.7
HMGA2-202ENST00000393577 MEIS3P2A8K0S8 358 aa25.66■■□□□ 1.7
HMGA2-202ENST00000393577 CAMK1Q14012 370 aa25.66■■□□□ 1.7
HMGA2-202ENST00000393577 AAK1Q2M2I8 961 aa25.66■■□□□ 1.7
HMGA2-202ENST00000393577 UBXN11Q5T124 520 aa25.66■■□□□ 1.7
HMGA2-202ENST00000393577 MRPL9Q9BYD2 267 aaKnown RBP25.66■■□□□ 1.7
HMGA2-202ENST00000393577 UBE2ZQ9H832 354 aaPredicted RBP25.66■■□□□ 1.7
HMGA2-202ENST00000393577 E9PMD0 336 aa25.65■■□□□ 1.7
HMGA2-202ENST00000393577 FGF18O76093 207 aa25.65■■□□□ 1.7
HMGA2-202ENST00000393577 AXLP30530 894 aa25.65■■□□□ 1.7
HMGA2-202ENST00000393577 PBX3P40426 434 aa25.65■■□□□ 1.7
HMGA2-202ENST00000393577 KCNQ1P51787 676 aa25.65■■□□□ 1.7
HMGA2-202ENST00000393577 ZRSR1Q15695 479 aaKnown RBP25.65■■□□□ 1.7
HMGA2-202ENST00000393577 AMHR2Q16671 573 aa25.65■■□□□ 1.7
HMGA2-202ENST00000393577 CSPP1Q1MSJ5 1256 aa25.65■■□□□ 1.7
HMGA2-202ENST00000393577 ARL6IP4Q66PJ3 421 aaKnown RBP25.65■■□□□ 1.7
HMGA2-202ENST00000393577 BSNDQ8WZ55 320 aa25.65■■□□□ 1.7
HMGA2-202ENST00000393577 SYMPKQ92797 1274 aaKnown RBP25.65■■□□□ 1.7
HMGA2-202ENST00000393577 PGBD4Q96DM1 585 aa25.65■■□□□ 1.7
HMGA2-202ENST00000393577 DNM3Q9UQ16 869 aa25.65■■□□□ 1.7
HMGA2-202ENST00000393577 INPP5FQ9Y2H2 1132 aa25.65■■□□□ 1.7
HMGA2-202ENST00000393577 TCF20Q9UGU0 1960 aaKnown RBP25.64■■□□□ 1.7
HMGA2-202ENST00000393577 EYA4O95677 639 aa25.64■■□□□ 1.7
HMGA2-202ENST00000393577 SYT1P21579 422 aa25.64■■□□□ 1.7
HMGA2-202ENST00000393577 NCBP1Q09161 790 aaKnown RBP25.64■■□□□ 1.7
HMGA2-202ENST00000393577 NOTUMQ6P988 496 aa25.64■■□□□ 1.7
HMGA2-202ENST00000393577 KCNT2Q6UVM3 1135 aa25.64■■□□□ 1.7
HMGA2-202ENST00000393577 GLB1LQ6UWU2 654 aa25.64■■□□□ 1.7
HMGA2-202ENST00000393577 ZNF558Q96NG5 402 aa25.64■■□□□ 1.7
HMGA2-202ENST00000393577 POLD4Q9HCU8 107 aa25.64■■□□□ 1.7
HMGA2-202ENST00000393577 B4GALT5O43286 388 aa25.63■■□□□ 1.69
HMGA2-202ENST00000393577 ARF4P18085 180 aaPredicted RBP25.63■■□□□ 1.69
HMGA2-202ENST00000393577 IRS1P35568 1242 aa25.63■■□□□ 1.69
HMGA2-202ENST00000393577 CDCA2Q69YH5 1023 aaPredicted RBP25.63■■□□□ 1.69
HMGA2-202ENST00000393577 AGMOQ6ZNB7 445 aa25.63■■□□□ 1.69
HMGA2-202ENST00000393577 KCNK18Q7Z418 384 aa25.63■■□□□ 1.69
HMGA2-202ENST00000393577 MRPL10Q7Z7H8 261 aaKnown RBP25.63■■□□□ 1.69
HMGA2-202ENST00000393577 ZBTB8OSQ8IWT0 167 aa25.63■■□□□ 1.69
HMGA2-202ENST00000393577 SNX21Q969T3 373 aa25.63■■□□□ 1.69
HMGA2-202ENST00000393577 CCDC51Q96ER9 411 aa25.63■■□□□ 1.69
HMGA2-202ENST00000393577 EIF2AQ9BY44 585 aaKnown RBP25.63■■□□□ 1.69
HMGA2-202ENST00000393577 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.62■■□□□ 1.69
HMGA2-202ENST00000393577 OFD1O75665 1012 aa25.62■■□□□ 1.69
HMGA2-202ENST00000393577 BMP15O95972 392 aa25.62■■□□□ 1.69
HMGA2-202ENST00000393577 UBE3AQ05086 875 aa25.62■■□□□ 1.69
HMGA2-202ENST00000393577 SF3A1Q15459 793 aaKnown RBP25.62■■□□□ 1.69
HMGA2-202ENST00000393577 NOMO2Q5JPE7 1267 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms