RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 ROPN1Q9HAT0 212 aaPredicted RBP18.38■□□□□ 0.53
PTPA-207ENST00000393370 USP40Q9NVE5 1235 aa18.38■□□□□ 0.53
PTPA-207ENST00000393370 RASAL2Q9UJF2 1139 aa18.38■□□□□ 0.53
PTPA-207ENST00000393370 PITPNM2Q9BZ72 1349 aa18.38■□□□□ 0.53
PTPA-207ENST00000393370 SNAP23O00161 211 aa18.37■□□□□ 0.53
PTPA-207ENST00000393370 MARK3P27448 753 aa18.37■□□□□ 0.53
PTPA-207ENST00000393370 FKBP3Q00688 224 aaKnown RBP18.37■□□□□ 0.53
PTPA-207ENST00000393370 GRAMD1AQ96CP6 724 aa18.37■□□□□ 0.53
PTPA-207ENST00000393370 H2AFZP0C0S5 128 aa18.37■□□□□ 0.53
PTPA-207ENST00000393370 LSAMPQ13449 338 aa18.37■□□□□ 0.53
PTPA-207ENST00000393370 H2AFVQ71UI9 128 aa18.37■□□□□ 0.53
PTPA-207ENST00000393370 KBTBD2Q8IY47 623 aa18.37■□□□□ 0.53
PTPA-207ENST00000393370 HAPLN3Q96S86 360 aa18.37■□□□□ 0.53
PTPA-207ENST00000393370 BLOC1S4Q9NUP1 217 aa18.37■□□□□ 0.53
PTPA-207ENST00000393370 ANAPC4Q9UJX5 808 aa18.37■□□□□ 0.53
PTPA-207ENST00000393370 SLC4A7Q9Y6M7 1214 aa18.37■□□□□ 0.53
PTPA-207ENST00000393370 KIF1AQ12756 1690 aa18.37■□□□□ 0.53
PTPA-207ENST00000393370 ANKRD63C9JTQ0 380 aa18.36■□□□□ 0.53
PTPA-207ENST00000393370 CAPN9O14815 690 aa18.36■□□□□ 0.53
PTPA-207ENST00000393370 ARHGAP18Q8N392 663 aa18.36■□□□□ 0.53
PTPA-207ENST00000393370 MIPEPQ99797 713 aa18.36■□□□□ 0.53
PTPA-207ENST00000393370 ISCA1Q9BUE6 129 aa18.36■□□□□ 0.53
PTPA-207ENST00000393370 ETNK2Q9NVF9 386 aa18.36■□□□□ 0.53
PTPA-207ENST00000393370 PCDHA3Q9Y5H8 950 aa18.36■□□□□ 0.53
PTPA-207ENST00000393370 NUP188Q5SRE5 1749 aa18.36■□□□□ 0.53
PTPA-207ENST00000393370 hCG_2014768A0A024R1R8 64 aa18.36■□□□□ 0.53
PTPA-207ENST00000393370 PVALEFA0A1B0GWK0 134 aa18.36■□□□□ 0.53
PTPA-207ENST00000393370 LAD1O00515 517 aa18.36■□□□□ 0.53
PTPA-207ENST00000393370 HNRNPRO43390 633 aaKnown RBP18.36■□□□□ 0.53
PTPA-207ENST00000393370 TBX10O75333 385 aa18.36■□□□□ 0.53
PTPA-207ENST00000393370 LYNP07948 512 aa18.36■□□□□ 0.53
PTPA-207ENST00000393370 OR52Z1P0C646 297 aa18.36■□□□□ 0.53
PTPA-207ENST00000393370 LMNB2Q03252 620 aa18.36■□□□□ 0.53
PTPA-207ENST00000393370 PPP2R5EQ16537 467 aa18.36■□□□□ 0.53
PTPA-207ENST00000393370 ZCWPW2Q504Y3 356 aa18.36■□□□□ 0.53
PTPA-207ENST00000393370 TRIM59Q8IWR1 403 aa18.36■□□□□ 0.53
PTPA-207ENST00000393370 RBM46Q8TBY0 533 aaKnown RBP18.36■□□□□ 0.53
PTPA-207ENST00000393370 DTX3LQ8TDB6 740 aa18.36■□□□□ 0.53
PTPA-207ENST00000393370 USH1CQ9Y6N9 552 aa18.36■□□□□ 0.53
PTPA-207ENST00000393370 FAM196BA6NMK8 535 aa18.36■□□□□ 0.53
PTPA-207ENST00000393370 MAPK13O15264 365 aa18.36■□□□□ 0.53
PTPA-207ENST00000393370 RTP1P59025 263 aa18.36■□□□□ 0.53
PTPA-207ENST00000393370 SFSWAPQ12872 951 aaKnown RBP18.36■□□□□ 0.53
PTPA-207ENST00000393370 PROM2Q8N271 834 aa18.36■□□□□ 0.53
PTPA-207ENST00000393370 SERPINB12Q96P63 405 aa18.36■□□□□ 0.53
PTPA-207ENST00000393370 RIC8AQ9NPQ8 531 aa18.36■□□□□ 0.53
PTPA-207ENST00000393370 A0A0A6YYK5 440 aaPredicted RBP18.35■□□□□ 0.53
PTPA-207ENST00000393370 DESP17661 470 aa18.35■□□□□ 0.53
PTPA-207ENST00000393370 SLC9A1P19634 815 aa18.35■□□□□ 0.53
PTPA-207ENST00000393370 RASSF2P50749 326 aa18.35■□□□□ 0.53
PTPA-207ENST00000393370 DEUP1Q05D60 604 aa18.35■□□□□ 0.53
PTPA-207ENST00000393370 RRP1BQ14684 758 aaKnown RBP18.35■□□□□ 0.53
PTPA-207ENST00000393370 ACSBG2Q5FVE4 666 aa18.35■□□□□ 0.53
PTPA-207ENST00000393370 TTC27Q6P3X3 843 aa18.35■□□□□ 0.53
PTPA-207ENST00000393370 ADGRA1Q86SQ6 560 aa18.35■□□□□ 0.53
PTPA-207ENST00000393370 CYP4X1Q8N118 509 aa18.35■□□□□ 0.53
PTPA-207ENST00000393370 SH3RF3Q8TEJ3 882 aaPredicted RBP18.35■□□□□ 0.53
PTPA-207ENST00000393370 SPOCK2Q92563 424 aa18.35■□□□□ 0.53
PTPA-207ENST00000393370 PHACTR1Q9C0D0 580 aa18.35■□□□□ 0.53
PTPA-207ENST00000393370 CDC42EP4Q9H3Q1 356 aaKnown RBP18.35■□□□□ 0.53
PTPA-207ENST00000393370 NENFQ9UMX5 172 aa18.35■□□□□ 0.53
PTPA-207ENST00000393370 RPL26L1Q9UNX3 145 aaKnown RBP18.35■□□□□ 0.53
PTPA-207ENST00000393370 TRAFD1O14545 582 aaPredicted RBP18.35■□□□□ 0.53
PTPA-207ENST00000393370 PFDN1O60925 122 aa18.35■□□□□ 0.53
PTPA-207ENST00000393370 SLC34A1Q06495 639 aa18.35■□□□□ 0.53
PTPA-207ENST00000393370 DNAJC3Q13217 504 aa18.35■□□□□ 0.53
PTPA-207ENST00000393370 KPNB1Q14974 876 aaKnown RBP18.35■□□□□ 0.53
PTPA-207ENST00000393370 EXOC3L4Q17RC7 722 aa18.35■□□□□ 0.53
PTPA-207ENST00000393370 WDR72Q3MJ13 1102 aa18.35■□□□□ 0.53
PTPA-207ENST00000393370 GALNT17Q6IS24 598 aa18.35■□□□□ 0.53
PTPA-207ENST00000393370 IFNL2Q8IZJ0 200 aa18.35■□□□□ 0.53
PTPA-207ENST00000393370 ALG3Q92685 438 aa18.35■□□□□ 0.53
PTPA-207ENST00000393370 TUBGCP5Q96RT8 1024 aa18.35■□□□□ 0.53
PTPA-207ENST00000393370 LNPEPQ9UIQ6 1025 aa18.35■□□□□ 0.53
PTPA-207ENST00000393370 CCDC88AQ3V6T2 1871 aa18.34■□□□□ 0.53
PTPA-207ENST00000393370 PTPN4P29074 926 aa18.34■□□□□ 0.53
PTPA-207ENST00000393370 EPS15P42566 896 aa18.34■□□□□ 0.53
PTPA-207ENST00000393370 NEK3P51956 506 aa18.34■□□□□ 0.53
PTPA-207ENST00000393370 GRB10Q13322 594 aa18.34■□□□□ 0.53
PTPA-207ENST00000393370 ARHGEF18Q6ZSZ5 1173 aa18.34■□□□□ 0.53
PTPA-207ENST00000393370 ZNF365Q70YC5 407 aa18.34■□□□□ 0.53
PTPA-207ENST00000393370 U2AF1L4Q8WU68 220 aaKnown RBP18.34■□□□□ 0.53
PTPA-207ENST00000393370 CALML4Q96GE6 196 aa18.34■□□□□ 0.53
PTPA-207ENST00000393370 RUNDC3BQ96NL0 473 aa18.34■□□□□ 0.53
PTPA-207ENST00000393370 TLE6Q9H808 572 aa18.34■□□□□ 0.53
PTPA-207ENST00000393370 SLCO1B3Q9NPD5 702 aa18.34■□□□□ 0.53
PTPA-207ENST00000393370 TMOD4Q9NZQ9 345 aa18.34■□□□□ 0.53
PTPA-207ENST00000393370 TBK1Q9UHD2 729 aa18.34■□□□□ 0.53
PTPA-207ENST00000393370 NPHP3-ACAD11A0A0J9YXS1 232 aa18.34■□□□□ 0.53
PTPA-207ENST00000393370 DDX3XO00571 662 aaKnown RBP eCLIP18.34■□□□□ 0.537e-19■■■■□ 25.2
PTPA-207ENST00000393370 CCNT1O60563 726 aaKnown RBP18.34■□□□□ 0.53
PTPA-207ENST00000393370 UCHL3P15374 230 aa18.34■□□□□ 0.53
PTPA-207ENST00000393370 GALCP54803 685 aa18.34■□□□□ 0.53
PTPA-207ENST00000393370 CABP4P57796 275 aa18.34■□□□□ 0.53
PTPA-207ENST00000393370 MOGSQ13724 837 aa18.34■□□□□ 0.53
PTPA-207ENST00000393370 LETM2Q2VYF4 491 aa18.34■□□□□ 0.53
PTPA-207ENST00000393370 ZNF568Q3ZCX4 644 aa18.34■□□□□ 0.53
PTPA-207ENST00000393370 LIN52Q52LA3 116 aa18.34■□□□□ 0.53
PTPA-207ENST00000393370 CEP128Q6ZU80 1094 aa18.34■□□□□ 0.53
PTPA-207ENST00000393370 MYOCDQ8IZQ8 938 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms