RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 DMP1Q13316 513 aaPredicted RBP15.54■□□□□ 0.08
MKS1-203ENST00000393120 KIF22Q14807 665 aa15.54■□□□□ 0.08
MKS1-203ENST00000393120 GNPTABQ3T906 1256 aa15.54■□□□□ 0.08
MKS1-203ENST00000393120 EPC2Q52LR7 807 aa15.54■□□□□ 0.08
MKS1-203ENST00000393120 C1orf220Q5T0J3 134 aa15.54■□□□□ 0.08
MKS1-203ENST00000393120 FAM102BQ5T8I3 360 aa15.54■□□□□ 0.08
MKS1-203ENST00000393120 PLA2G4FQ68DD2 849 aa15.54■□□□□ 0.08
MKS1-203ENST00000393120 PHLDB3Q6NSJ2 640 aa15.54■□□□□ 0.08
MKS1-203ENST00000393120 SLFN11Q7Z7L1 901 aa15.54■□□□□ 0.08
MKS1-203ENST00000393120 MAP4K3Q8IVH8 894 aa15.54■□□□□ 0.08
MKS1-203ENST00000393120 RDH13Q8NBN7 331 aa15.54■□□□□ 0.08
MKS1-203ENST00000393120 CHST13Q8NET6 341 aa15.54■□□□□ 0.08
MKS1-203ENST00000393120 PCIF1Q9H4Z3 704 aa15.54■□□□□ 0.08
MKS1-203ENST00000393120 JPH1Q9HDC5 661 aaPredicted RBP15.54■□□□□ 0.08
MKS1-203ENST00000393120 GPRC5CQ9NQ84 441 aa15.54■□□□□ 0.08
MKS1-203ENST00000393120 ST7Q9NRC1 585 aa15.54■□□□□ 0.08
MKS1-203ENST00000393120 GABBR1Q9UBS5 961 aa15.54■□□□□ 0.08
MKS1-203ENST00000393120 MYH11P35749 1972 aa15.53■□□□□ 0.08
MKS1-203ENST00000393120 EMSYQ7Z589 1322 aa15.53■□□□□ 0.08
MKS1-203ENST00000393120 ZNF862O60290 1169 aa15.53■□□□□ 0.08
MKS1-203ENST00000393120 USP2O75604 605 aaPredicted RBP15.53■□□□□ 0.08
MKS1-203ENST00000393120 ABCD1P33897 745 aa15.53■□□□□ 0.08
MKS1-203ENST00000393120 DLG4P78352 724 aa15.53■□□□□ 0.08
MKS1-203ENST00000393120 PPP3CAQ08209 521 aa15.53■□□□□ 0.08
MKS1-203ENST00000393120 ABHD15Q6UXT9 468 aa15.53■□□□□ 0.08
MKS1-203ENST00000393120 DNERQ8NFT8 737 aa15.53■□□□□ 0.08
MKS1-203ENST00000393120 SLC9A2Q9UBY0 812 aa15.53■□□□□ 0.08
MKS1-203ENST00000393120 KCNG1Q9UIX4 513 aa15.53■□□□□ 0.08
MKS1-203ENST00000393120 TISP43B9A030 160 aa15.53■□□□□ 0.08
MKS1-203ENST00000393120 DGAT1O75907 488 aa15.53■□□□□ 0.08
MKS1-203ENST00000393120 FTCDO95954 541 aa15.53■□□□□ 0.08
MKS1-203ENST00000393120 OAS2P29728 719 aaKnown RBP15.53■□□□□ 0.08
MKS1-203ENST00000393120 ICAM3P32942 547 aa15.53■□□□□ 0.08
MKS1-203ENST00000393120 MCPH1Q8NEM0 835 aa15.53■□□□□ 0.08
MKS1-203ENST00000393120 TPCN2Q8NHX9 752 aa15.53■□□□□ 0.08
MKS1-203ENST00000393120 LNX1Q8TBB1 728 aaPredicted RBP15.53■□□□□ 0.08
MKS1-203ENST00000393120 KCNN1Q92952 543 aa15.53■□□□□ 0.08
MKS1-203ENST00000393120 PBKQ96KB5 322 aa15.53■□□□□ 0.08
MKS1-203ENST00000393120 CEP170P1Q96L14 293 aa15.53■□□□□ 0.08
MKS1-203ENST00000393120 SH2D3AQ9BRG2 576 aa15.53■□□□□ 0.08
MKS1-203ENST00000393120 LRRC1Q9BTT6 524 aa15.53■□□□□ 0.08
MKS1-203ENST00000393120 ACBD3Q9H3P7 528 aa15.53■□□□□ 0.08
MKS1-203ENST00000393120 FZD1Q9UP38 647 aa15.53■□□□□ 0.08
MKS1-203ENST00000393120 TMEM253P0C7T8 217 aa15.52■□□□□ 0.07
MKS1-203ENST00000393120 RPS6KA1Q15418 735 aa15.52■□□□□ 0.07
MKS1-203ENST00000393120 SWSAP1Q6NVH7 229 aa15.52■□□□□ 0.07
MKS1-203ENST00000393120 NLGN2Q8NFZ4 835 aa15.52■□□□□ 0.07
MKS1-203ENST00000393120 U2AF1L4Q8WU68 220 aaKnown RBP15.52■□□□□ 0.07
MKS1-203ENST00000393120 FBXL18Q96ME1 805 aa15.52■□□□□ 0.07
MKS1-203ENST00000393120 PSMB7Q99436 277 aa15.52■□□□□ 0.07
MKS1-203ENST00000393120 SUGCTQ9HAC7 445 aa15.52■□□□□ 0.07
MKS1-203ENST00000393120 KMT5AQ9NQR1 393 aa15.52■□□□□ 0.07
MKS1-203ENST00000393120 CCDC169A6NNP5 214 aa15.51■□□□□ 0.07
MKS1-203ENST00000393120 H0YCG3 227 aa15.51■□□□□ 0.07
MKS1-203ENST00000393120 KIF4AO95239 1232 aa15.51■□□□□ 0.07
MKS1-203ENST00000393120 SCP2P22307 547 aa15.51■□□□□ 0.07
MKS1-203ENST00000393120 TNFRSF8P28908 595 aa15.51■□□□□ 0.07
MKS1-203ENST00000393120 CNGA1P29973 690 aa15.51■□□□□ 0.07
MKS1-203ENST00000393120 ADSSP30520 456 aa15.51■□□□□ 0.07
MKS1-203ENST00000393120 NOP2P46087 812 aaKnown RBP15.51■□□□□ 0.07
MKS1-203ENST00000393120 ACTR2P61160 394 aa15.51■□□□□ 0.07
MKS1-203ENST00000393120 MIS18BP1Q6P0N0 1132 aa15.51■□□□□ 0.07
MKS1-203ENST00000393120 SYCE1Q8N0S2 351 aa15.51■□□□□ 0.07
MKS1-203ENST00000393120 PLEKHO2Q8TD55 490 aa15.51■□□□□ 0.07
MKS1-203ENST00000393120 TMC2Q8TDI7 906 aa15.51■□□□□ 0.07
MKS1-203ENST00000393120 TAF4BQ92750 862 aa15.51■□□□□ 0.07
MKS1-203ENST00000393120 RNF216Q9NWF9 866 aaPredicted RBP15.51■□□□□ 0.07
MKS1-203ENST00000393120 MYH10P35580 1976 aa15.51■□□□□ 0.07
MKS1-203ENST00000393120 NCANO14594 1321 aa15.51■□□□□ 0.07
MKS1-203ENST00000393120 FOXN3O00409 490 aaPredicted RBP15.51■□□□□ 0.07
MKS1-203ENST00000393120 ATG7O95352 703 aa15.51■□□□□ 0.07
MKS1-203ENST00000393120 GALCP54803 685 aa15.51■□□□□ 0.07
MKS1-203ENST00000393120 STXBP2Q15833 593 aa15.51■□□□□ 0.07
MKS1-203ENST00000393120 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.51■□□□□ 0.07
MKS1-203ENST00000393120 MS4A14Q96JA4 679 aa15.51■□□□□ 0.07
MKS1-203ENST00000393120 CALR3Q96L12 384 aaKnown RBP15.51■□□□□ 0.07
MKS1-203ENST00000393120 MFSD14AQ96MC6 490 aa15.51■□□□□ 0.07
MKS1-203ENST00000393120 RBM12Q9NTZ6 932 aaKnown RBP15.51■□□□□ 0.07
MKS1-203ENST00000393120 SUCLA2Q9P2R7 463 aaPredicted RBP15.51■□□□□ 0.07
MKS1-203ENST00000393120 STXBP5LQ9Y2K9 1186 aa15.51■□□□□ 0.07
MKS1-203ENST00000393120 COQ4Q9Y3A0 265 aa15.51■□□□□ 0.07
MKS1-203ENST00000393120 SNCAIPQ9Y6H5 919 aa15.51■□□□□ 0.07
MKS1-203ENST00000393120 PFASO15067 1338 aa15.5■□□□□ 0.07
MKS1-203ENST00000393120 DENND3A2RUS2 1198 aa15.5■□□□□ 0.07
MKS1-203ENST00000393120 LRRIQ3A6PVS8 624 aaPredicted RBP15.5■□□□□ 0.07
MKS1-203ENST00000393120 ANKRD63C9JTQ0 380 aa15.5■□□□□ 0.07
MKS1-203ENST00000393120 TNFAIP3P21580 790 aa15.5■□□□□ 0.07
MKS1-203ENST00000393120 GTF2H1P32780 548 aa15.5■□□□□ 0.07
MKS1-203ENST00000393120 GCLMP48507 274 aa15.5■□□□□ 0.07
MKS1-203ENST00000393120 AARSP49588 968 aaKnown RBP eCLIP15.5■□□□□ 0.07
MKS1-203ENST00000393120 SNRNP35Q16560 246 aaKnown RBP15.5■□□□□ 0.07
MKS1-203ENST00000393120 BRDTQ58F21 947 aaPredicted RBP15.5■□□□□ 0.07
MKS1-203ENST00000393120 XKR3Q5GH77 459 aa15.5■□□□□ 0.07
MKS1-203ENST00000393120 LBX2Q6XYB7 198 aa15.5■□□□□ 0.07
MKS1-203ENST00000393120 GLYCTKQ8IVS8 523 aa15.5■□□□□ 0.07
MKS1-203ENST00000393120 AENQ8WTP8 325 aaKnown RBP15.5■□□□□ 0.07
MKS1-203ENST00000393120 BSNDQ8WZ55 320 aa15.5■□□□□ 0.07
MKS1-203ENST00000393120 TMEM117Q9H0C3 514 aa15.5■□□□□ 0.07
MKS1-203ENST00000393120 PDE11AQ9HCR9 933 aa15.5■□□□□ 0.07
MKS1-203ENST00000393120 UBE2TQ9NPD8 197 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms