RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 SUPT20HL1Q3ZLR7 823 aa27.82■■■□□ 2.04
SMARCD3-203ENST00000392811 PLEKHO2Q8TD55 490 aa27.82■■■□□ 2.04
SMARCD3-203ENST00000392811 ATP6V0A1Q93050 837 aa27.82■■■□□ 2.04
SMARCD3-203ENST00000392811 CEP170P1Q96L14 293 aa27.82■■■□□ 2.04
SMARCD3-203ENST00000392811 SYT11Q9BT88 431 aa27.82■■■□□ 2.04
SMARCD3-203ENST00000392811 KIFC3Q9BVG8 833 aa27.82■■■□□ 2.04
SMARCD3-203ENST00000392811 PDE11AQ9HCR9 933 aa27.82■■■□□ 2.04
SMARCD3-203ENST00000392811 ZCCHC17Q9NP64 241 aaKnown RBP27.82■■■□□ 2.04
SMARCD3-203ENST00000392811 INTUQ9ULD6 942 aa27.82■■■□□ 2.04
SMARCD3-203ENST00000392811 TBX20Q9UMR3 447 aa27.82■■■□□ 2.04
SMARCD3-203ENST00000392811 DOCK5Q9H7D0 1870 aa27.82■■■□□ 2.04
SMARCD3-203ENST00000392811 MAPK13O15264 365 aa27.81■■■□□ 2.04
SMARCD3-203ENST00000392811 N4BP1O75113 896 aaKnown RBP27.81■■■□□ 2.04
SMARCD3-203ENST00000392811 GCLMP48507 274 aa27.81■■■□□ 2.04
SMARCD3-203ENST00000392811 SMTNP53814 917 aa27.81■■■□□ 2.04
SMARCD3-203ENST00000392811 SWSAP1Q6NVH7 229 aa27.81■■■□□ 2.04
SMARCD3-203ENST00000392811 CCNI2Q6ZMN8 369 aaPredicted RBP27.81■■■□□ 2.04
SMARCD3-203ENST00000392811 GLYCTKQ8IVS8 523 aa27.81■■■□□ 2.04
SMARCD3-203ENST00000392811 HDAC7Q8WUI4 952 aa27.81■■■□□ 2.04
SMARCD3-203ENST00000392811 JPH1Q9HDC5 661 aaPredicted RBP27.81■■■□□ 2.04
SMARCD3-203ENST00000392811 RBM12Q9NTZ6 932 aaKnown RBP27.81■■■□□ 2.04
SMARCD3-203ENST00000392811 NFASCO94856 1347 aa27.81■■■□□ 2.04
SMARCD3-203ENST00000392811 WDR90Q96KV7 1748 aa27.81■■■□□ 2.04
SMARCD3-203ENST00000392811 LRRIQ3A6PVS8 624 aaPredicted RBP27.8■■■□□ 2.04
SMARCD3-203ENST00000392811 PSAPP07602 524 aa27.8■■■□□ 2.04
SMARCD3-203ENST00000392811 LMNB1P20700 586 aa27.8■■■□□ 2.04
SMARCD3-203ENST00000392811 RFX1P22670 979 aa27.8■■■□□ 2.04
SMARCD3-203ENST00000392811 SP4Q02446 784 aa27.8■■■□□ 2.04
SMARCD3-203ENST00000392811 DMP1Q13316 513 aaPredicted RBP27.8■■■□□ 2.04
SMARCD3-203ENST00000392811 LRRC57Q8N9N7 239 aa27.8■■■□□ 2.04
SMARCD3-203ENST00000392811 BSNDQ8WZ55 320 aa27.8■■■□□ 2.04
SMARCD3-203ENST00000392811 CDHR1Q96JP9 859 aa27.8■■■□□ 2.04
SMARCD3-203ENST00000392811 EXOC7Q9UPT5 735 aa27.8■■■□□ 2.04
SMARCD3-203ENST00000392811 MYPNQ86TC9 1320 aa27.8■■■□□ 2.04
SMARCD3-203ENST00000392811 ANKRD63C9JTQ0 380 aa27.8■■■□□ 2.04
SMARCD3-203ENST00000392811 P4HA2O15460 535 aa27.8■■■□□ 2.04
SMARCD3-203ENST00000392811 USP2O75604 605 aaPredicted RBP27.8■■■□□ 2.04
SMARCD3-203ENST00000392811 EIF3JO75822 258 aaKnown RBP27.8■■■□□ 2.04
SMARCD3-203ENST00000392811 MYBL2P10244 700 aa27.8■■■□□ 2.04
SMARCD3-203ENST00000392811 SOX10P56693 466 aa27.8■■■□□ 2.04
SMARCD3-203ENST00000392811 EPC2Q52LR7 807 aa27.8■■■□□ 2.04
SMARCD3-203ENST00000392811 FMNL3Q8IVF7 1028 aa27.8■■■□□ 2.04
SMARCD3-203ENST00000392811 SLC9A2Q9UBY0 812 aa27.8■■■□□ 2.04
SMARCD3-203ENST00000392811 ARID2Q68CP9 1835 aa27.8■■■□□ 2.04
SMARCD3-203ENST00000392811 GOLGA8IPA6NC78 632 aa27.79■■■□□ 2.04
SMARCD3-203ENST00000392811 GOLGA8JA6NMD2 632 aa27.79■■■□□ 2.04
SMARCD3-203ENST00000392811 ADRB2P07550 413 aa27.79■■■□□ 2.04
SMARCD3-203ENST00000392811 CCDC172P0C7W6 258 aa27.79■■■□□ 2.04
SMARCD3-203ENST00000392811 ADSSP30520 456 aa27.79■■■□□ 2.04
SMARCD3-203ENST00000392811 CETN1Q12798 172 aa27.79■■■□□ 2.04
SMARCD3-203ENST00000392811 SH3D19Q5HYK7 790 aa27.79■■■□□ 2.04
SMARCD3-203ENST00000392811 MAP4K3Q8IVH8 894 aa27.79■■■□□ 2.04
SMARCD3-203ENST00000392811 GSPT2Q8IYD1 628 aaKnown RBP27.79■■■□□ 2.04
SMARCD3-203ENST00000392811 TPCN2Q8NHX9 752 aa27.79■■■□□ 2.04
SMARCD3-203ENST00000392811 KIFAP3Q92845 792 aa27.79■■■□□ 2.04
SMARCD3-203ENST00000392811 HVCN1Q96D96 273 aa27.79■■■□□ 2.04
SMARCD3-203ENST00000392811 GOLPH3Q9H4A6 298 aa27.79■■■□□ 2.04
SMARCD3-203ENST00000392811 KMT5AQ9NQR1 393 aa27.79■■■□□ 2.04
SMARCD3-203ENST00000392811 DMGDHQ9UI17 866 aaKnown RBP27.79■■■□□ 2.04
SMARCD3-203ENST00000392811 LCTP09848 1927 aa27.79■■■□□ 2.04
SMARCD3-203ENST00000392811 A0A0A6YYK5 440 aaPredicted RBP27.79■■■□□ 2.04
SMARCD3-203ENST00000392811 DENND3A2RUS2 1198 aa27.79■■■□□ 2.04
SMARCD3-203ENST00000392811 SPATA31C2B4DYI2 1134 aa27.79■■■□□ 2.04
SMARCD3-203ENST00000392811 FOXN3O00409 490 aaPredicted RBP27.79■■■□□ 2.04
SMARCD3-203ENST00000392811 DKC1O60832 514 aaKnown RBP eCLIP27.79■■■□□ 2.04
SMARCD3-203ENST00000392811 LRRN2O75325 713 aa27.79■■■□□ 2.04
SMARCD3-203ENST00000392811 STAM2O75886 525 aa27.79■■■□□ 2.04
SMARCD3-203ENST00000392811 ARHGEF19Q8IW93 802 aa27.79■■■□□ 2.04
SMARCD3-203ENST00000392811 HINFPQ9BQA5 517 aa27.79■■■□□ 2.04
SMARCD3-203ENST00000392811 LOC285556D6RIA3 1793 aa27.78■■■□□ 2.04
SMARCD3-203ENST00000392811 POLR2AP24928 1970 aaKnown RBP27.78■■■□□ 2.04
SMARCD3-203ENST00000392811 SORBS3O60504 671 aa27.78■■■□□ 2.04
SMARCD3-203ENST00000392811 GALCP54803 685 aa27.78■■■□□ 2.04
SMARCD3-203ENST00000392811 ACTR2P61160 394 aa27.78■■■□□ 2.04
SMARCD3-203ENST00000392811 MRPS25P82663 173 aaKnown RBP27.78■■■□□ 2.04
SMARCD3-203ENST00000392811 GPS2Q13227 327 aa27.78■■■□□ 2.04
SMARCD3-203ENST00000392811 KIF22Q14807 665 aa27.78■■■□□ 2.04
SMARCD3-203ENST00000392811 RPS6KA1Q15418 735 aa27.78■■■□□ 2.04
SMARCD3-203ENST00000392811 GNPTABQ3T906 1256 aa27.78■■■□□ 2.04
SMARCD3-203ENST00000392811 CCDC60Q8IWA6 550 aaPredicted RBP27.78■■■□□ 2.04
SMARCD3-203ENST00000392811 SPIRE2Q8WWL2 714 aa27.78■■■□□ 2.04
SMARCD3-203ENST00000392811 UBE2TQ9NPD8 197 aaPredicted RBP27.78■■■□□ 2.04
SMARCD3-203ENST00000392811 SNCAIPQ9Y6H5 919 aa27.78■■■□□ 2.04
SMARCD3-203ENST00000392811 PFASO15067 1338 aa27.77■■■□□ 2.04
SMARCD3-203ENST00000392811 CBWD2Q8IUF1 395 aa27.77■■■□□ 2.04
SMARCD3-203ENST00000392811 FBXO41Q8TF61 875 aa27.77■■■□□ 2.04
SMARCD3-203ENST00000392811 RUBCNQ92622 972 aa27.77■■■□□ 2.04
SMARCD3-203ENST00000392811 NTPCRQ9BSD7 190 aaKnown RBP27.77■■■□□ 2.04
SMARCD3-203ENST00000392811 KIF4AO95239 1232 aa27.77■■■□□ 2.04
SMARCD3-203ENST00000392811 TNNT3P45378 269 aaPredicted RBP27.77■■■□□ 2.04
SMARCD3-203ENST00000392811 SLC7A5Q01650 507 aa27.77■■■□□ 2.04
SMARCD3-203ENST00000392811 VGLL4Q14135 290 aa27.77■■■□□ 2.04
SMARCD3-203ENST00000392811 ABHD15Q6UXT9 468 aa27.77■■■□□ 2.04
SMARCD3-203ENST00000392811 DLK2Q6UY11 383 aa27.77■■■□□ 2.04
SMARCD3-203ENST00000392811 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.77■■■□□ 2.04
SMARCD3-203ENST00000392811 TAF4BQ92750 862 aa27.77■■■□□ 2.04
SMARCD3-203ENST00000392811 ZBTB9Q96C00 473 aa27.77■■■□□ 2.04
SMARCD3-203ENST00000392811 MAF1Q9H063 256 aa27.77■■■□□ 2.04
SMARCD3-203ENST00000392811 TMEM117Q9H0C3 514 aa27.77■■■□□ 2.04
SMARCD3-203ENST00000392811 SEPT9Q9UHD8 586 aaPredicted RBP27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms