RNA–Protein interactions for RNA: ENST00000392521.6

CIT-203, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CIT, Length 8,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-203ENST00000392521 A0A1B0GW55 424 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 TARSL2A2RTX5 802 aaKnown RBP12.63□□□□□ -0.39
CIT-203ENST00000392521 SRGAP2O75044 1071 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 DUX4L2P0CJ85 424 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 DUX4L3P0CJ86 424 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 DUX4L4P0CJ87 422 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 DUX4L5P0CJ88 424 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 DUX4L6P0CJ89 424 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 DUX4L7P0CJ90 424 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 RALAP11233 206 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 CPB1P15086 417 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 TRPC1P48995 793 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 SMAD1Q15797 465 aaKnown RBP12.63□□□□□ -0.39
CIT-203ENST00000392521 THNSL1Q8IYQ7 743 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 AGR3Q8TD06 166 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 DUX4Q9UBX2 424 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 AURKCQ9UQB9 309 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 CCDC78A2IDD5 438 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 KCNA2P16389 499 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 PTPN21Q16825 1174 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 PPP4R3CPQ6ZMV5 832 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 TRIM62Q9BVG3 475 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 TMEM245Q9H330 911 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 IKBKBO14920 756 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 MMEP08473 750 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 FAM160B2Q86V87 743 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 TTC13Q8NBP0 860 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 UNC45AQ9H3U1 944 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 SMARCAD1Q9H4L7 1026 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 PAPOLBQ9NRJ5 636 aaKnown RBP12.63□□□□□ -0.39
CIT-203ENST00000392521 DYNLL1P63167 89 aaKnown RBP12.63□□□□□ -0.39
CIT-203ENST00000392521 TBL3Q12788 808 aaKnown RBP12.63□□□□□ -0.39
CIT-203ENST00000392521 USPL1Q5W0Q7 1092 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 LBHD1Q9BQE6 289 aaPredicted RBP12.63□□□□□ -0.39
CIT-203ENST00000392521 DHX36Q9H2U1 1008 aaKnown RBP12.63□□□□□ -0.39
CIT-203ENST00000392521 CYP4F11Q9HBI6 524 aa12.63□□□□□ -0.39
CIT-203ENST00000392521 PARD3Q8TEW0 1356 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 APOA4P06727 396 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 CACNB2Q08289 660 aaPredicted RBP12.62□□□□□ -0.39
CIT-203ENST00000392521 PIGSQ96S52 555 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 DCTN4Q9UJW0 460 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 CAB39Q9Y376 341 aaPredicted RBP12.62□□□□□ -0.39
CIT-203ENST00000392521 MYH11P35749 1972 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 GOLGA8RI6L899 631 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 LZTS3O60299 673 aaPredicted RBP12.62□□□□□ -0.39
CIT-203ENST00000392521 GRAMD1CQ8IYS0 662 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 USP6NLQ92738 828 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 PRAG1Q86YV5 1406 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 CALB1P05937 261 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 GFAPP14136 432 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 BEND6Q5SZJ8 279 aaPredicted RBP12.62□□□□□ -0.39
CIT-203ENST00000392521 ANO5Q75V66 913 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 RHOT2Q8IXI1 618 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 MB21D1Q8N884 522 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 SH3TC2Q8TF17 1288 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 FGGP02679 453 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 GPS1Q13098 491 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 ZNF235Q14590 738 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 CEP78Q5JTW2 689 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 E4F1Q66K89 784 aaPredicted RBP12.62□□□□□ -0.39
CIT-203ENST00000392521 FAM96AQ9H5X1 160 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 RASSF10A6NK89 507 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 PDE8BO95263 885 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 CYBBP04839 570 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 ST8SIA6P61647 398 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 MFSD4BQ5TF39 518 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 RFX8Q6ZV50 586 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 PHLPP2Q6ZVD8 1323 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 PNMA6FA0A0J9YX94 578 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 SEC24DO94855 1032 aaPredicted RBP12.62□□□□□ -0.39
CIT-203ENST00000392521 CHRNA3P32297 505 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 TMEM270Q6UE05 265 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.62□□□□□ -0.39
CIT-203ENST00000392521 HEMGNQ9BXL5 484 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 RRAGDQ9NQL2 400 aaPredicted RBP12.62□□□□□ -0.39
CIT-203ENST00000392521 NFU1Q9UMS0 254 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 SUPT3HO75486 399 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 CRKLP46109 303 aaKnown RBP12.62□□□□□ -0.39
CIT-203ENST00000392521 KDELC2Q7Z4H8 507 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 SLAIN2Q9P270 581 aa12.62□□□□□ -0.39
CIT-203ENST00000392521 JAK3P52333 1124 aa12.61□□□□□ -0.39
CIT-203ENST00000392521 CDC37Q16543 378 aaPredicted RBP12.61□□□□□ -0.39
CIT-203ENST00000392521 COG1Q8WTW3 980 aa12.61□□□□□ -0.39
CIT-203ENST00000392521 MEFVO15553 781 aaPredicted RBP12.61□□□□□ -0.39
CIT-203ENST00000392521 RARS2Q5T160 578 aaKnown RBP12.61□□□□□ -0.39
CIT-203ENST00000392521 MFSD14CQ5VZR4 134 aa12.61□□□□□ -0.39
CIT-203ENST00000392521 PLD3Q8IV08 490 aa12.61□□□□□ -0.39
CIT-203ENST00000392521 ZNF713Q8N859 430 aaPredicted RBP12.61□□□□□ -0.39
CIT-203ENST00000392521 LOC102724428A0A0B4J2F2 783 aa12.61□□□□□ -0.39
CIT-203ENST00000392521 SSTR3P32745 418 aaPredicted RBP12.61□□□□□ -0.39
CIT-203ENST00000392521 SIK1P57059 783 aa12.61□□□□□ -0.39
CIT-203ENST00000392521 LRRC63Q05C16 580 aa12.61□□□□□ -0.39
CIT-203ENST00000392521 ANKRD49Q8WVL7 239 aa12.61□□□□□ -0.39
CIT-203ENST00000392521 THAP9Q9H5L6 903 aa12.61□□□□□ -0.39
CIT-203ENST00000392521 PHKG1Q16816 387 aa12.61□□□□□ -0.39
CIT-203ENST00000392521 COBLL1Q53SF7 1204 aa12.61□□□□□ -0.39
CIT-203ENST00000392521 DTNAQ9Y4J8 743 aa12.61□□□□□ -0.39
CIT-203ENST00000392521 MLH3Q9UHC1 1453 aa12.61□□□□□ -0.39
CIT-203ENST00000392521 CTIFO43310 598 aaKnown RBP12.61□□□□□ -0.39
CIT-203ENST00000392521 RXRBP28702 533 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms