RNA–Protein interactions for RNA: ENST00000391297.1

RNU6-279P-201, Transcript of RNA, U6 small nuclear 279, pseudogene, humanhuman

BASIC

Gene RNU6-279P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-279P-201ENST00000391297 SLC6A20Q9NP91 592 aa0.87□□□□□ -2.27
RNU6-279P-201ENST00000391297 TRMT13Q9NUP7 481 aaKnown RBP0.87□□□□□ -2.27
RNU6-279P-201ENST00000391297 ENTPD2Q9Y5L3 495 aa0.87□□□□□ -2.27
RNU6-279P-201ENST00000391297 WNT6Q9Y6F9 365 aa0.87□□□□□ -2.27
RNU6-279P-201ENST00000391297 COL4A4P53420 1690 aaPredicted RBP0.87□□□□□ -2.27
RNU6-279P-201ENST00000391297 COL2A1P02458 1487 aaPredicted RBP0.86□□□□□ -2.27
RNU6-279P-201ENST00000391297 ARNTLO00327 626 aa0.86□□□□□ -2.27
RNU6-279P-201ENST00000391297 TBX6O95947 436 aaPredicted RBP0.86□□□□□ -2.27
RNU6-279P-201ENST00000391297 WT1P19544 449 aaPredicted RBP0.86□□□□□ -2.27
RNU6-279P-201ENST00000391297 CLCQ05315 142 aa0.86□□□□□ -2.27
RNU6-279P-201ENST00000391297 DBPQ10586 325 aaPredicted RBP0.86□□□□□ -2.27
RNU6-279P-201ENST00000391297 MOGSQ13724 837 aa0.86□□□□□ -2.27
RNU6-279P-201ENST00000391297 FAM214AQ32MH5 1076 aa0.86□□□□□ -2.27
RNU6-279P-201ENST00000391297 GK5Q6ZS86 529 aa0.86□□□□□ -2.27
RNU6-279P-201ENST00000391297 APBB1IPQ7Z5R6 666 aaPredicted RBP0.86□□□□□ -2.27
RNU6-279P-201ENST00000391297 SYT12Q8IV01 421 aa0.86□□□□□ -2.27
RNU6-279P-201ENST00000391297 DIO2Q92813 273 aa0.86□□□□□ -2.27
RNU6-279P-201ENST00000391297 NKD2Q969F2 451 aaPredicted RBP0.86□□□□□ -2.27
RNU6-279P-201ENST00000391297 RNF34Q969K3 372 aa0.86□□□□□ -2.27
RNU6-279P-201ENST00000391297 SLC7A6OSQ96CW6 309 aaPredicted RBP0.86□□□□□ -2.27
RNU6-279P-201ENST00000391297 FGD4Q96M96 766 aa0.86□□□□□ -2.27
RNU6-279P-201ENST00000391297 DCLRE1CQ96SD1 692 aaKnown RBP0.86□□□□□ -2.27
RNU6-279P-201ENST00000391297 EHMT1Q9H9B1 1298 aa0.86□□□□□ -2.27
RNU6-279P-201ENST00000391297 SMURF1Q9HCE7 757 aa0.86□□□□□ -2.27
RNU6-279P-201ENST00000391297 ARHGAP28Q9P2N2 729 aa0.86□□□□□ -2.27
RNU6-279P-201ENST00000391297 PCDHA2Q9Y5H9 948 aa0.86□□□□□ -2.27
RNU6-279P-201ENST00000391297 IGKV3D-20A0A0C4DH25 116 aa0.85□□□□□ -2.27
RNU6-279P-201ENST00000391297 C2orf78A6NCI8 922 aa0.85□□□□□ -2.27
RNU6-279P-201ENST00000391297 MEIS3P2A8K0S8 358 aa0.85□□□□□ -2.27
RNU6-279P-201ENST00000391297 KCNU1A8MYU2 1149 aa0.85□□□□□ -2.27
RNU6-279P-201ENST00000391297 TREHO43280 583 aa0.85□□□□□ -2.27
RNU6-279P-201ENST00000391297 SLC28A2O43868 658 aa0.85□□□□□ -2.27
RNU6-279P-201ENST00000391297 ZSCAN20P17040 1043 aaPredicted RBP0.85□□□□□ -2.27
RNU6-279P-201ENST00000391297 CDKN2AP42771 156 aaKnown RBP0.85□□□□□ -2.27
RNU6-279P-201ENST00000391297 IRF9Q00978 393 aa0.85□□□□□ -2.27
RNU6-279P-201ENST00000391297 LSAMPQ13449 338 aa0.85□□□□□ -2.27
RNU6-279P-201ENST00000391297 TCIRG1Q13488 830 aa0.85□□□□□ -2.27
RNU6-279P-201ENST00000391297 STILQ15468 1287 aa0.85□□□□□ -2.27
RNU6-279P-201ENST00000391297 PDCD4Q53EL6 469 aaKnown RBP0.85□□□□□ -2.27
RNU6-279P-201ENST00000391297 CEP78Q5JTW2 689 aa0.85□□□□□ -2.27
RNU6-279P-201ENST00000391297 FAM196AQ6ZSG2 479 aa0.85□□□□□ -2.27
RNU6-279P-201ENST00000391297 ADAT2Q7Z6V5 191 aaKnown RBP0.85□□□□□ -2.27
RNU6-279P-201ENST00000391297 PNPLA5Q7Z6Z6 429 aaPredicted RBP0.85□□□□□ -2.27
RNU6-279P-201ENST00000391297 RCBTB1Q8NDN9 531 aa0.85□□□□□ -2.27
RNU6-279P-201ENST00000391297 NPLOC4Q8TAT6 608 aa0.85□□□□□ -2.27
RNU6-279P-201ENST00000391297 GCDHQ92947 438 aaPredicted RBP0.85□□□□□ -2.27
RNU6-279P-201ENST00000391297 WNK4Q96J92 1243 aa0.85□□□□□ -2.27
RNU6-279P-201ENST00000391297 VCPIP1Q96JH7 1222 aa0.85□□□□□ -2.27
RNU6-279P-201ENST00000391297 CAMKK2Q96RR4 588 aa0.85□□□□□ -2.27
RNU6-279P-201ENST00000391297 CPPED1Q9BRF8 314 aaPredicted RBP0.85□□□□□ -2.27
RNU6-279P-201ENST00000391297 JAM3Q9BX67 310 aa0.85□□□□□ -2.27
RNU6-279P-201ENST00000391297 NCDNQ9UBB6 729 aa0.85□□□□□ -2.27
RNU6-279P-201ENST00000391297 TRIP12Q14669 1992 aaPredicted RBP0.85□□□□□ -2.27
RNU6-279P-201ENST00000391297 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP0.84□□□□□ -2.27
RNU6-279P-201ENST00000391297 HLA-DOAP06340 250 aa0.84□□□□□ -2.27
RNU6-279P-201ENST00000391297 LCP1P13796 627 aa0.84□□□□□ -2.27
RNU6-279P-201ENST00000391297 EIF4BP23588 611 aaKnown RBP0.84□□□□□ -2.27
RNU6-279P-201ENST00000391297 CERS1P27544 350 aa0.84□□□□□ -2.27
RNU6-279P-201ENST00000391297 NAALADL2Q58DX5 795 aa0.84□□□□□ -2.27
RNU6-279P-201ENST00000391297 LARP1BQ659C4 914 aaKnown RBP0.84□□□□□ -2.27
RNU6-279P-201ENST00000391297 ALG1LQ6GMV1 187 aa0.84□□□□□ -2.27
RNU6-279P-201ENST00000391297 GRAMD4Q6IC98 578 aa0.84□□□□□ -2.27
RNU6-279P-201ENST00000391297 IQCEQ6IPM2 695 aa0.84□□□□□ -2.27
RNU6-279P-201ENST00000391297 ARHGEF39Q8N4T4 335 aa0.84□□□□□ -2.27
RNU6-279P-201ENST00000391297 NANOGP1Q8N7R0 232 aa0.84□□□□□ -2.27
RNU6-279P-201ENST00000391297 LPPQ93052 612 aa0.84□□□□□ -2.27
RNU6-279P-201ENST00000391297 HAUS7Q99871 368 aa0.84□□□□□ -2.27
RNU6-279P-201ENST00000391297 CASS4Q9NQ75 786 aa0.84□□□□□ -2.27
RNU6-279P-201ENST00000391297 INCENPQ9NQS7 918 aa0.84□□□□□ -2.27
RNU6-279P-201ENST00000391297 TMEM88BA6NKF7 163 aa0.83□□□□□ -2.28
RNU6-279P-201ENST00000391297 MARCH11A6NNE9 402 aa0.83□□□□□ -2.28
RNU6-279P-201ENST00000391297 PPP6CO00743 305 aa0.83□□□□□ -2.28
RNU6-279P-201ENST00000391297 CDKL5O76039 1030 aa0.83□□□□□ -2.28
RNU6-279P-201ENST00000391297 FOSP01100 380 aaPredicted RBP0.83□□□□□ -2.28
RNU6-279P-201ENST00000391297 CYP2D6P10635 497 aa0.83□□□□□ -2.28
RNU6-279P-201ENST00000391297 MC4RP32245 332 aa0.83□□□□□ -2.28
RNU6-279P-201ENST00000391297 CYP4F3Q08477 520 aa0.83□□□□□ -2.28
RNU6-279P-201ENST00000391297 ZYXQ15942 572 aaKnown RBP0.83□□□□□ -2.28
RNU6-279P-201ENST00000391297 ASIC2Q16515 512 aa0.83□□□□□ -2.28
RNU6-279P-201ENST00000391297 KANK2Q63ZY3 851 aa0.83□□□□□ -2.28
RNU6-279P-201ENST00000391297 KRT40Q6A162 431 aa0.83□□□□□ -2.28
RNU6-279P-201ENST00000391297 RHBDF2Q6PJF5 856 aa0.83□□□□□ -2.28
RNU6-279P-201ENST00000391297 BCL6BQ8N143 479 aaPredicted RBP0.83□□□□□ -2.28
RNU6-279P-201ENST00000391297 OR52N2Q8NGI0 321 aa0.83□□□□□ -2.28
RNU6-279P-201ENST00000391297 NOC4LQ9BVI4 516 aaKnown RBP0.83□□□□□ -2.28
RNU6-279P-201ENST00000391297 KLHL25Q9H0H3 589 aa0.83□□□□□ -2.28
RNU6-279P-201ENST00000391297 GBP3Q9H0R5 595 aa0.83□□□□□ -2.28
RNU6-279P-201ENST00000391297 GALNT8Q9NY28 637 aa0.83□□□□□ -2.28
RNU6-279P-201ENST00000391297 MCM8Q9UJA3 840 aa0.83□□□□□ -2.28
RNU6-279P-201ENST00000391297 ADAM21Q9UKJ8 722 aa0.83□□□□□ -2.28
RNU6-279P-201ENST00000391297 WDR3Q9UNX4 943 aaKnown RBP eCLIP0.83□□□□□ -2.28
RNU6-279P-201ENST00000391297 EFR3BQ9Y2G0 817 aa0.83□□□□□ -2.28
RNU6-279P-201ENST00000391297 FCGBPQ9Y6R7 5405 aaPredicted RBP0.83□□□□□ -2.28
RNU6-279P-201ENST00000391297 LACTBL1A8MY62 500 aa0.82□□□□□ -2.28
RNU6-279P-201ENST00000391297 MINDY4BA8MYZ0 360 aa0.82□□□□□ -2.28
RNU6-279P-201ENST00000391297 PPM1BO75688 479 aa0.82□□□□□ -2.28
RNU6-279P-201ENST00000391297 KCNH1O95259 989 aa0.82□□□□□ -2.28
RNU6-279P-201ENST00000391297 PLA2G2AP14555 144 aa0.82□□□□□ -2.28
RNU6-279P-201ENST00000391297 GARTP22102 1010 aa0.82□□□□□ -2.28
RNU6-279P-201ENST00000391297 PTGS1P23219 599 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms