RNA–Protein interactions for RNA: ENST00000391248.1

RNU1-78P-201, Transcript of RNA, U1 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU1-78P, Length 165 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-78P-201ENST00000391248 CUL4BQ13620 913 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 LRP8Q14114 963 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 TRIM25Q14258 630 aaKnown RBP1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 PTK2BQ14289 1009 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 SPARCL1Q14515 664 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 PLS1Q14651 629 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 POLD3Q15054 466 aaPredicted RBP1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 GPR19Q15760 415 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 ATP2B3Q16720 1220 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 CPEB4Q17RY0 729 aaKnown RBP eCLIP1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 KIZQ2M2Z5 673 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 SLC35G1Q2M3R5 365 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 MUM1Q2TAK8 710 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 ZNF800Q2TB10 664 aaPredicted RBP eCLIP1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 KHDC1Q4VXA5 237 aaKnown RBP1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 PAN2Q504Q3 1202 aaKnown RBP1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 RILPL1Q5EBL4 403 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 FAM26FQ5R3K3 315 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 ZNF362Q5T0B9 420 aaPredicted RBP1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 FAM182BQ5T319 152 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 NUGGCQ68CJ6 796 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 CWF19L1Q69YN2 538 aaKnown RBP1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 SULT6B1Q6IMI4 303 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 ESRP1Q6NXG1 681 aaKnown RBP1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 LETMD1Q6P1Q0 360 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 ZNF449Q6P9G9 518 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 MFSD6Q6ZSS7 791 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 EP400NLQ6ZTU2 488 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 USP49Q70CQ1 688 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 TRIM46Q7Z4K8 759 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 CXorf67Q86X51 503 aaPredicted RBP1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 VSIG1Q86XK7 387 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 LYSMD2Q8IV50 215 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 HERC6Q8IVU3 1022 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 HSCBQ8IWL3 235 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 CELF5Q8N6W0 485 aaKnown RBP1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 USHBP1Q8N6Y0 703 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 MFSD2AQ8NA29 543 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 C12orf50Q8NA57 414 aaPredicted RBP1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 DTWD2Q8NBA8 298 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 OR2I1PQ8NGU4 316 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 GOT1L1Q8NHS2 421 aaPredicted RBP1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 SH3RF2Q8TEC5 729 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 STYXQ8WUJ0 223 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 NANOS1Q8WY41 292 aaKnown RBP1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 ANKS1AQ92625 1134 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 HTRA1Q92743 480 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 DLG3Q92796 817 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 SH3KBP1Q96B97 665 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 TBC1D31Q96DN5 1066 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 LTV1Q96GA3 475 aaPredicted RBP1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 C16orf92Q96LL3 132 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 COG8Q96MW5 612 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 ACAP3Q96P50 834 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 DMRTA2Q96SC8 542 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 RMDN3Q96TC7 470 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 MYCBPQ99417 103 aaPredicted RBP1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 VRK1Q99986 396 aaPredicted RBP1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 BOCQ9BWV1 1114 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 BRIP1Q9BX63 1249 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 PAIP1Q9H074 479 aaKnown RBP1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 CNTD2Q9H8S5 307 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 MLXIPQ9HAP2 919 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 CYP4F12Q9HCS2 524 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 WASH6PQ9NQA3 447 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 ACSS2Q9NR19 701 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 HAUS2Q9NVX0 235 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 CLDND1Q9NY35 253 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 IGSF9Q9P2J2 1179 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 ORC3Q9UBD5 711 aaPredicted RBP1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 FBXL7Q9UJT9 491 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 ZNF112Q9UJU3 913 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 SLC13A4Q9UKG4 626 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 ACAD8Q9UKU7 415 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 PCOLCE2Q9UKZ9 415 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 OGDHLQ9ULD0 1010 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 USP18Q9UMW8 372 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 PCDHA6Q9UN73 950 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 STARD13Q9Y3M8 1113 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 TIMM13Q9Y5L4 95 aaPredicted RBP1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 ATP23Q9Y6H3 246 aa1.75□□□□□ -2.13
RNU1-78P-201ENST00000391248 SETD1AO15047 1707 aaKnown RBP1.74□□□□□ -2.13
RNU1-78P-201ENST00000391248 A0A0B4J269 797 aa1.74□□□□□ -2.13
RNU1-78P-201ENST00000391248 NPHP3-ACAD11A0A0J9YXS1 232 aa1.74□□□□□ -2.13
RNU1-78P-201ENST00000391248 FAM170AA1A519 330 aa1.74□□□□□ -2.13
RNU1-78P-201ENST00000391248 FAM234BA2RU67 622 aa1.74□□□□□ -2.13
RNU1-78P-201ENST00000391248 C7orf72A4D263 438 aa1.74□□□□□ -2.13
RNU1-78P-201ENST00000391248 PGPEP1LA6NFU8 196 aa1.74□□□□□ -2.13
RNU1-78P-201ENST00000391248 HMX3A6NHT5 357 aa1.74□□□□□ -2.13
RNU1-78P-201ENST00000391248 FAM90A27PA6NNH2 459 aa1.74□□□□□ -2.13
RNU1-78P-201ENST00000391248 NEURL1BA8MQ27 555 aa1.74□□□□□ -2.13
RNU1-78P-201ENST00000391248 ADARB2-AS1A8MUL3 147 aa1.74□□□□□ -2.13
RNU1-78P-201ENST00000391248 H7C0S8 307 aa1.74□□□□□ -2.13
RNU1-78P-201ENST00000391248 MYO1FO00160 1098 aa1.74□□□□□ -2.13
RNU1-78P-201ENST00000391248 RTCAO00442 366 aaKnown RBP1.74□□□□□ -2.13
RNU1-78P-201ENST00000391248 MAN2B1O00754 1011 aa1.74□□□□□ -2.13
RNU1-78P-201ENST00000391248 SPTLC2O15270 562 aa1.74□□□□□ -2.13
RNU1-78P-201ENST00000391248 IRAK2O43187 625 aa1.74□□□□□ -2.13
RNU1-78P-201ENST00000391248 SIGLEC6O43699 453 aa1.74□□□□□ -2.13
RNU1-78P-201ENST00000391248 MAN1A2O60476 641 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms