RNA–Protein interactions for RNA: ENST00000389759.7

PKP4-202, Transcript of plakophilin 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PKP4, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-202ENST00000389759 GLI2P10070 1586 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 ZNF233A6NK53 670 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 USP17L5A8MUK1 530 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 MAP2K7O14733 419 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 CCDC22O60826 627 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 PHF2O75151 1096 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 TRIM49P0CI25 452 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 TRIM49CP0CI26 452 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 KRT10P13645 584 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 CD44P16070 742 aaKnown RBP9.23□□□□□ -0.93
PKP4-202ENST00000389759 ZNF18P17022 549 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 KCNA3P22001 575 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 PDIA2Q13087 525 aaKnown RBP9.23□□□□□ -0.93
PKP4-202ENST00000389759 PDIA5Q14554 519 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 RFX8Q6ZV50 586 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 DCLK2Q8N568 766 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 SLC44A5Q8NCS7 719 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 MCUQ8NE86 351 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 FAM20AQ96MK3 541 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 C11orf70Q9BRQ4 267 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 RIOK1Q9BRS2 568 aaKnown RBP9.23□□□□□ -0.93
PKP4-202ENST00000389759 CELF4Q9BZC1 486 aaKnown RBP9.23□□□□□ -0.93
PKP4-202ENST00000389759 ROPN1BQ9BZX4 212 aaPredicted RBP9.23□□□□□ -0.93
PKP4-202ENST00000389759 ROPN1Q9HAT0 212 aaPredicted RBP9.23□□□□□ -0.93
PKP4-202ENST00000389759 KCND1Q9NSA2 647 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 BSDC1Q9NW68 430 aaPredicted RBP9.23□□□□□ -0.93
PKP4-202ENST00000389759 UNC13BO14795 1591 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 USP17L15C9J2P7 530 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 USP17L13C9JLJ4 530 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 USP17L11C9JVI0 530 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 USP17L18D6R9N7 530 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 USP17L22D6RA61 530 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 USP17L17D6RBQ6 530 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 USP17L19D6RCP7 530 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 USP17L20D6RJB6 530 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 ZBTB5O15062 677 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 FOXP2O15409 715 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 LPXNO60711 386 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 PLEKP08567 350 aaPredicted RBP9.23□□□□□ -0.93
PKP4-202ENST00000389759 CD58P19256 250 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 USP17L24Q0WX57 530 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 ST3GAL1Q11201 340 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 TRIM28Q13263 835 aaKnown RBP9.23□□□□□ -0.93
PKP4-202ENST00000389759 SLC29A2Q14542 456 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 FOXR1Q6PIV2 292 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 USP17L6PQ6QN14 398 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 CCNYQ8ND76 341 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 ICA1LQ8NDH6 482 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 ATL2Q8NHH9 583 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 SLC35G2Q8TBE7 412 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 DEPDC1BQ8WUY9 529 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 CASKIN2Q8WXE0 1202 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 RAPGEF5Q92565 580 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 FAF2Q96CS3 445 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 DTNBP1Q96EV8 351 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 HAUS8Q9BT25 410 aa9.23□□□□□ -0.93
PKP4-202ENST00000389759 hCG_2014768A0A024R1R8 64 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 FAM47DPA6NHR8 397 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 PDXKO00764 312 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 PRPSAP2O60256 369 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 HSPA4LO95757 839 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 HNRNPCP07910 306 aaKnown RBP eCLIP9.22□□□□□ -0.931e-9■□□□□ 9.8
PKP4-202ENST00000389759 ERFEQ4G0M1 354 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 SPOPLQ6IQ16 392 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 ERICH1Q86X53 443 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 RHOT1Q8IXI2 618 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 PPM1NQ8N819 430 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 CCDC124Q96CT7 223 aaKnown RBP9.22□□□□□ -0.93
PKP4-202ENST00000389759 C9orf72Q96LT7 481 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 LBHD1Q9BQE6 289 aaPredicted RBP9.22□□□□□ -0.93
PKP4-202ENST00000389759 DHX36Q9H2U1 1008 aaKnown RBP9.22□□□□□ -0.93
PKP4-202ENST00000389759 ZNF277Q9NRM2 450 aaPredicted RBP9.22□□□□□ -0.93
PKP4-202ENST00000389759 DLGAP2Q9P1A6 1054 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 SEL1LQ9UBV2 794 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 SEPT9Q9UHD8 586 aaPredicted RBP9.22□□□□□ -0.93
PKP4-202ENST00000389759 PCDHA6Q9UN73 950 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 PCDHA8Q9Y5H6 950 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 NRKQ7Z2Y5 1582 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 WDR17Q8IZU2 1322 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 ZFYVE16Q7Z3T8 1539 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 ANP32DO95626 131 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 KITP10721 976 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 ITIH2P19823 946 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 HOXA13P31271 388 aaPredicted RBP9.22□□□□□ -0.93
PKP4-202ENST00000389759 PEX3P56589 373 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 COPS2P61201 443 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 EZH2Q15910 746 aaKnown RBP9.22□□□□□ -0.93
PKP4-202ENST00000389759 CDKAL1Q5VV42 579 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 KRT39Q6A163 491 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 LRRC34Q8IZ02 419 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 FAM149B1Q96BN6 582 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 WWP1Q9H0M0 922 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 GOLPH3Q9H4A6 298 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 DONSONQ9NYP3 566 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 NXF1Q9UBU9 619 aaKnown RBP9.22□□□□□ -0.93
PKP4-202ENST00000389759 MARK3P27448 753 aa9.22□□□□□ -0.93
PKP4-202ENST00000389759 EEF1DP29692 281 aaKnown RBP9.22□□□□□ -0.93
PKP4-202ENST00000389759 NOP14P78316 857 aaKnown RBP9.22□□□□□ -0.93
PKP4-202ENST00000389759 TFAMQ00059 246 aaKnown RBP9.22□□□□□ -0.93
PKP4-202ENST00000389759 MED21Q13503 144 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms