RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 FBXL5Q9UKA1 691 aa20.29■□□□□ 0.84
PPFIA1-202ENST00000389547 RASSF10A6NK89 507 aa20.29■□□□□ 0.84
PPFIA1-202ENST00000389547 OPLAHO14841 1288 aa20.29■□□□□ 0.84
PPFIA1-202ENST00000389547 ATP6V0A1Q93050 837 aa20.29■□□□□ 0.84
PPFIA1-202ENST00000389547 NUDT12Q9BQG2 462 aa20.29■□□□□ 0.84
PPFIA1-202ENST00000389547 TEX13BQ9BXU2 312 aa20.29■□□□□ 0.84
PPFIA1-202ENST00000389547 FAM114A2Q9NRY5 505 aa20.29■□□□□ 0.84
PPFIA1-202ENST00000389547 ADM5C9JUS6 153 aa20.29■□□□□ 0.84
PPFIA1-202ENST00000389547 CD44P16070 742 aaKnown RBP20.29■□□□□ 0.84
PPFIA1-202ENST00000389547 CCNHP51946 323 aaPredicted RBP20.29■□□□□ 0.84
PPFIA1-202ENST00000389547 PEX3P56589 373 aa20.29■□□□□ 0.84
PPFIA1-202ENST00000389547 TTMPQ5BVD1 217 aa20.29■□□□□ 0.84
PPFIA1-202ENST00000389547 DEPTORQ8TB45 409 aa20.29■□□□□ 0.84
PPFIA1-202ENST00000389547 TRPM4Q8TD43 1214 aa20.29■□□□□ 0.84
PPFIA1-202ENST00000389547 ACAD9Q9H845 621 aa20.29■□□□□ 0.84
PPFIA1-202ENST00000389547 ECT2Q9H8V3 914 aa20.29■□□□□ 0.84
PPFIA1-202ENST00000389547 MYH2Q9UKX2 1941 aa20.28■□□□□ 0.84
PPFIA1-202ENST00000389547 ATP2A2P16615 1042 aaKnown RBP20.28■□□□□ 0.84
PPFIA1-202ENST00000389547 ANKRD40Q6AI12 368 aa20.28■□□□□ 0.84
PPFIA1-202ENST00000389547 MMGT1Q8N4V1 131 aa20.28■□□□□ 0.84
PPFIA1-202ENST00000389547 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.28■□□□□ 0.842e-8■■■■■ 44.2
PPFIA1-202ENST00000389547 OSBPP22059 807 aa20.28■□□□□ 0.84
PPFIA1-202ENST00000389547 MDM1Q8TC05 714 aa20.28■□□□□ 0.84
PPFIA1-202ENST00000389547 BACE1P56817 501 aa20.28■□□□□ 0.84
PPFIA1-202ENST00000389547 LONP2Q86WA8 852 aa20.28■□□□□ 0.84
PPFIA1-202ENST00000389547 VPS52Q8N1B4 723 aa20.28■□□□□ 0.84
PPFIA1-202ENST00000389547 GMCL1P1Q8NEA9 526 aa20.28■□□□□ 0.84
PPFIA1-202ENST00000389547 ZNF668Q96K58 619 aaPredicted RBP20.28■□□□□ 0.84
PPFIA1-202ENST00000389547 PPP1R16BQ96T49 567 aa20.28■□□□□ 0.84
PPFIA1-202ENST00000389547 TAF1DQ9H5J8 278 aaPredicted RBP20.28■□□□□ 0.84
PPFIA1-202ENST00000389547 BAZ2AQ9UIF9 1905 aaKnown RBP20.28■□□□□ 0.84
PPFIA1-202ENST00000389547 MSH4O15457 936 aa20.27■□□□□ 0.84
PPFIA1-202ENST00000389547 DDX47Q9H0S4 455 aaKnown RBP20.27■□□□□ 0.84
PPFIA1-202ENST00000389547 BTAF1O14981 1849 aa20.27■□□□□ 0.84
PPFIA1-202ENST00000389547 CFAP73A6NFT4 308 aa20.27■□□□□ 0.84
PPFIA1-202ENST00000389547 HNRNPDLO14979 420 aaKnown RBP20.27■□□□□ 0.84
PPFIA1-202ENST00000389547 GFPT1Q06210 699 aaPredicted RBP20.27■□□□□ 0.84
PPFIA1-202ENST00000389547 DMP1Q13316 513 aaPredicted RBP20.27■□□□□ 0.84
PPFIA1-202ENST00000389547 PAPD7Q5XG87 772 aaKnown RBP20.27■□□□□ 0.84
PPFIA1-202ENST00000389547 SWSAP1Q6NVH7 229 aa20.27■□□□□ 0.84
PPFIA1-202ENST00000389547 PADI6Q6TGC4 694 aa20.27■□□□□ 0.84
PPFIA1-202ENST00000389547 LIMA1Q9UHB6 759 aaKnown RBP20.27■□□□□ 0.84
PPFIA1-202ENST00000389547 ITIH6Q6UXX5 1313 aa20.27■□□□□ 0.84
PPFIA1-202ENST00000389547 ZSCAN5CA6NGD5 496 aaPredicted RBP20.27■□□□□ 0.83
PPFIA1-202ENST00000389547 CCT8L1PA6NM43 557 aa20.27■□□□□ 0.83
PPFIA1-202ENST00000389547 BMP6P22004 513 aa20.27■□□□□ 0.83
PPFIA1-202ENST00000389547 CTCFP49711 727 aaPredicted RBP20.27■□□□□ 0.83
PPFIA1-202ENST00000389547 GDAP1Q8TB36 358 aa20.27■□□□□ 0.83
PPFIA1-202ENST00000389547 PARD3BQ8TEW8 1205 aa20.27■□□□□ 0.83
PPFIA1-202ENST00000389547 NDST4Q9H3R1 872 aa20.27■□□□□ 0.83
PPFIA1-202ENST00000389547 CAPN11Q9UMQ6 739 aa20.27■□□□□ 0.83
PPFIA1-202ENST00000389547 EXOC7Q9UPT5 735 aa20.27■□□□□ 0.83
PPFIA1-202ENST00000389547 C4BP0C0L5 1744 aa20.27■□□□□ 0.83
PPFIA1-202ENST00000389547 NFKBIEO00221 500 aa20.26■□□□□ 0.83
PPFIA1-202ENST00000389547 PDE2AO00408 941 aaPredicted RBP20.26■□□□□ 0.83
PPFIA1-202ENST00000389547 NR3C2P08235 984 aa20.26■□□□□ 0.83
PPFIA1-202ENST00000389547 TNNI1P19237 187 aa20.26■□□□□ 0.83
PPFIA1-202ENST00000389547 ORC2Q13416 577 aaPredicted RBP20.26■□□□□ 0.83
PPFIA1-202ENST00000389547 DLK2Q6UY11 383 aa20.26■□□□□ 0.83
PPFIA1-202ENST00000389547 DDX42Q86XP3 938 aaKnown RBP eCLIP20.26■□□□□ 0.83
PPFIA1-202ENST00000389547 ETAA1Q9NY74 926 aa20.26■□□□□ 0.83
PPFIA1-202ENST00000389547 PVALEFA0A1B0GWK0 134 aa20.26■□□□□ 0.83
PPFIA1-202ENST00000389547 GOLGA8IPA6NC78 632 aa20.26■□□□□ 0.83
PPFIA1-202ENST00000389547 GOLGA8JA6NMD2 632 aa20.26■□□□□ 0.83
PPFIA1-202ENST00000389547 ATP6V1G2O95670 118 aa20.26■□□□□ 0.83
PPFIA1-202ENST00000389547 KRT5P13647 590 aa20.26■□□□□ 0.83
PPFIA1-202ENST00000389547 RAD23BP54727 409 aa20.26■□□□□ 0.83
PPFIA1-202ENST00000389547 GRB10Q13322 594 aa20.26■□□□□ 0.83
PPFIA1-202ENST00000389547 ZNF449Q6P9G9 518 aa20.26■□□□□ 0.83
PPFIA1-202ENST00000389547 FMO2Q99518 471 aa20.26■□□□□ 0.83
PPFIA1-202ENST00000389547 LBHD1Q9BQE6 289 aaPredicted RBP20.26■□□□□ 0.83
PPFIA1-202ENST00000389547 IMPG2Q9BZV3 1241 aa20.26■□□□□ 0.83
PPFIA1-202ENST00000389547 SUDS3Q9H7L9 328 aaPredicted RBP20.26■□□□□ 0.83
PPFIA1-202ENST00000389547 ANKFY1Q9P2R3 1169 aa20.26■□□□□ 0.83
PPFIA1-202ENST00000389547 GABBR1Q9UBS5 961 aa20.26■□□□□ 0.83
PPFIA1-202ENST00000389547 ARP10275 920 aa20.26■□□□□ 0.83
PPFIA1-202ENST00000389547 MAN2A1Q16706 1144 aa20.26■□□□□ 0.83
PPFIA1-202ENST00000389547 ANKRD20A8PQ5CZ79 823 aa20.26■□□□□ 0.83
PPFIA1-202ENST00000389547 CATSPER3Q86XQ3 398 aa20.26■□□□□ 0.83
PPFIA1-202ENST00000389547 POMGNT1Q8WZA1 660 aa20.26■□□□□ 0.83
PPFIA1-202ENST00000389547 PGRMC1O00264 195 aaKnown RBP20.25■□□□□ 0.83
PPFIA1-202ENST00000389547 POTEJP0CG39 1038 aa20.25■□□□□ 0.83
PPFIA1-202ENST00000389547 LRRC14Q15048 493 aa20.25■□□□□ 0.83
PPFIA1-202ENST00000389547 STXBP2Q15833 593 aa20.25■□□□□ 0.83
PPFIA1-202ENST00000389547 NUP188Q5SRE5 1749 aa20.25■□□□□ 0.83
PPFIA1-202ENST00000389547 ATP5DP30049 168 aa20.25■□□□□ 0.83
PPFIA1-202ENST00000389547 AENQ8WTP8 325 aaKnown RBP20.25■□□□□ 0.83
PPFIA1-202ENST00000389547 SLC7A3Q8WY07 619 aa20.25■□□□□ 0.83
PPFIA1-202ENST00000389547 MKL1Q969V6 931 aa20.25■□□□□ 0.83
PPFIA1-202ENST00000389547 KCNH7Q9NS40 1196 aa20.25■□□□□ 0.83
PPFIA1-202ENST00000389547 ADAMTS1Q9UHI8 967 aa20.25■□□□□ 0.83
PPFIA1-202ENST00000389547 NMT1P30419 496 aaKnown RBP20.25■□□□□ 0.83
PPFIA1-202ENST00000389547 CUL1Q13616 776 aa20.25■□□□□ 0.83
PPFIA1-202ENST00000389547 PDCD2Q16342 344 aaPredicted RBP20.25■□□□□ 0.83
PPFIA1-202ENST00000389547 THEMIS2Q5TEJ8 643 aa20.25■□□□□ 0.83
PPFIA1-202ENST00000389547 TATDN1Q6P1N9 297 aa20.25■□□□□ 0.83
PPFIA1-202ENST00000389547 FAM186BQ8IYM0 893 aa20.25■□□□□ 0.83
PPFIA1-202ENST00000389547 ADSSL1Q8N142 457 aa20.25■□□□□ 0.83
PPFIA1-202ENST00000389547 ETNK1Q9HBU6 452 aa20.25■□□□□ 0.83
PPFIA1-202ENST00000389547 hCG_2014768A0A024R1R8 64 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms