RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 NBNO60934 754 aa13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 LARGE1O95461 756 aa13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 ARHGAP22Q7Z5H3 698 aa13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 ACSBG1Q96GR2 724 aa13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 UBN1Q9NPG3 1134 aa13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 UBE3CQ15386 1083 aa13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 TLK2Q86UE8 772 aa13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 SCG3Q8WXD2 468 aaKnown RBP13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 EXT2Q93063 718 aa13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 MAML3Q96JK9 1138 aa13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 KCNK16Q96T55 309 aa13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 ZWILCHQ9H900 591 aa13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 TLR3O15455 904 aaKnown RBP13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 FOSP01100 380 aaPredicted RBP13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 SPOUT1Q5T280 376 aaKnown RBP13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 FBXO11Q86XK2 927 aa13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 HNRNPLLQ8WVV9 542 aaKnown RBP13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 NSMFQ6X4W1 530 aa13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 TRABDQ9H4I3 376 aa13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 ITGB1BP2Q9UKP3 347 aa13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 SH2B2O14492 632 aaPredicted RBP13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 EIF3DO15371 548 aaKnown RBP eCLIP13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 EFCAB14O75071 495 aa13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 ALCAMQ13740 583 aa13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 E4F1Q66K89 784 aaPredicted RBP13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 STAG2Q8N3U4 1231 aa13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 STX19Q8N4C7 294 aa13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 ETAA1Q9NY74 926 aa13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 CDC26Q8NHZ8 85 aa13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 TBC1D22AQ8WUA7 517 aa13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 XPO6Q96QU8 1125 aaKnown RBP13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 NUP85Q9BW27 656 aa13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 VPS11Q9H270 941 aa13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 ZFATQ9P243 1243 aa13.18□□□□□ -0.3
SRGAP3-202ENST00000383836 GOLGA8HP0CJ92 632 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 PRAMEP78395 509 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 DMC1Q14565 340 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 RANBP17Q9H2T7 1088 aaKnown RBP13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 THRAP3Q9Y2W1 955 aaKnown RBP13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 ATP10DQ9P241 1426 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 FAM47DPA6NHR8 397 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 AKAP10O43572 662 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 DLGAP3O95886 979 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 PDIA2Q13087 525 aaKnown RBP13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 TRIP10Q15642 601 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 CCNI2Q6ZMN8 369 aaPredicted RBP13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 ITIH4Q14624 930 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 RASGRP2Q7LDG7 609 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 RFWD2Q8NHY2 731 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 MRPL1Q9BYD6 325 aaKnown RBP13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 SLC52A2Q9HAB3 445 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 TTC7AQ9ULT0 858 aaPredicted RBP13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 MTO1Q9Y2Z2 717 aaKnown RBP13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 hCG_1984214I3L0E3 225 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 MDH1BQ5I0G3 518 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 ZNF713Q8N859 430 aaPredicted RBP13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 FAM210AQ96ND0 272 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 NACC1Q96RE7 527 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 ASXL2Q76L83 1435 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 MYH14Q7Z406 1995 aaKnown RBP13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 PLA2G4BP0C869 781 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 SOX5P35711 763 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 FOXD4Q12950 439 aaPredicted RBP13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 PTGISQ16647 500 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 ASPRV1Q53RT3 343 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 TJAP1Q5JTD0 557 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 TBC1D9BQ66K14 1250 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 LRRC47Q8N1G4 583 aaKnown RBP13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 TBCKQ8TEA7 893 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 KLHL25Q9H0H3 589 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 KDM4CQ9H3R0 1056 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 ZNF185O15231 689 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 IFNAR1P17181 557 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 CCZ1BP86790 482 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 CCZ1P86791 482 aaPredicted RBP13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 GRIN1Q05586 938 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 RINLQ6ZS11 566 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 SYDE1Q6ZW31 735 aaPredicted RBP13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 LUZP2Q86TE4 346 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 PPM1NQ8N819 430 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 TTC8Q8TAM2 541 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 CLMNQ96JQ2 1002 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 ASAP2O43150 1006 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 RNF217Q8TC41 542 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 NR1H4Q96RI1 486 aaPredicted RBP13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 KMT5AQ9NQR1 393 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 PCDHA1Q9Y5I3 950 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 CITO14578 2027 aa13.17□□□□□ -0.3
SRGAP3-202ENST00000383836 ZNF839A8K0R7 811 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 SNX2O60749 519 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 RCN1Q15293 331 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 PATL1Q86TB9 770 aaKnown RBP13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 TFCP2L1Q9NZI6 479 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 AMACRQ9UHK6 382 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 NLRP11P59045 1033 aaKnown RBP13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 TSPY1Q01534 308 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 ADRM1Q16186 407 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 HIF1AQ16665 826 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 ATP6V1B1P15313 513 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 MLH1P40692 756 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms