RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 NUBP1P53384 320 aa20.05■□□□□ 0.8
RPUSD3-201ENST00000383820 PPP2R5CQ13362 524 aa20.05■□□□□ 0.8
RPUSD3-201ENST00000383820 NOMO2Q5JPE7 1267 aa20.05■□□□□ 0.8
RPUSD3-201ENST00000383820 CATSPER4Q7RTX7 472 aa20.05■□□□□ 0.8
RPUSD3-201ENST00000383820 UBALD2Q8IYN6 164 aa20.05■□□□□ 0.8
RPUSD3-201ENST00000383820 PGBD4Q96DM1 585 aa20.05■□□□□ 0.8
RPUSD3-201ENST00000383820 FAM20AQ96MK3 541 aa20.05■□□□□ 0.8
RPUSD3-201ENST00000383820 SH2D3AQ9BRG2 576 aa20.05■□□□□ 0.8
RPUSD3-201ENST00000383820 IRF2BPLQ9H1B7 796 aa20.05■□□□□ 0.8
RPUSD3-201ENST00000383820 POMKQ9H5K3 350 aa20.05■□□□□ 0.8
RPUSD3-201ENST00000383820 NRDE2Q9H7Z3 1164 aa20.05■□□□□ 0.8
RPUSD3-201ENST00000383820 CYP26B1Q9NR63 512 aa20.05■□□□□ 0.8
RPUSD3-201ENST00000383820 TBC1D13Q9NVG8 400 aa20.05■□□□□ 0.8
RPUSD3-201ENST00000383820 WDFY4Q6ZS81 3184 aa20.05■□□□□ 0.8
RPUSD3-201ENST00000383820 ZDBF2Q9HCK1 2354 aa20.04■□□□□ 0.8
RPUSD3-201ENST00000383820 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.04■□□□□ 0.8
RPUSD3-201ENST00000383820 GALTP07902 379 aa20.04■□□□□ 0.8
RPUSD3-201ENST00000383820 GCFC2P16383 781 aaKnown RBP20.04■□□□□ 0.8
RPUSD3-201ENST00000383820 AVPR2P30518 371 aa20.04■□□□□ 0.8
RPUSD3-201ENST00000383820 CA8P35219 290 aa20.04■□□□□ 0.8
RPUSD3-201ENST00000383820 QARSP47897 775 aaKnown RBP20.04■□□□□ 0.8
RPUSD3-201ENST00000383820 TCF15Q12870 199 aa20.04■□□□□ 0.8
RPUSD3-201ENST00000383820 INF2Q27J81 1249 aa20.04■□□□□ 0.8
RPUSD3-201ENST00000383820 TMEM87AQ8NBN3 555 aa20.04■□□□□ 0.8
RPUSD3-201ENST00000383820 SLC7A3Q8WY07 619 aa20.04■□□□□ 0.8
RPUSD3-201ENST00000383820 LPPQ93052 612 aa20.04■□□□□ 0.8
RPUSD3-201ENST00000383820 NLRP4Q96MN2 994 aa20.04■□□□□ 0.8
RPUSD3-201ENST00000383820 IFT122Q9HBG6 1241 aa20.04■□□□□ 0.8
RPUSD3-201ENST00000383820 KCNMB3Q9NPA1 279 aa20.04■□□□□ 0.8
RPUSD3-201ENST00000383820 SORCS3Q9UPU3 1222 aa20.04■□□□□ 0.8
RPUSD3-201ENST00000383820 SLC37A4O43826 429 aa20.03■□□□□ 0.8
RPUSD3-201ENST00000383820 OFD1O75665 1012 aa20.03■□□□□ 0.8
RPUSD3-201ENST00000383820 RNASELQ05823 741 aaKnown RBP20.03■□□□□ 0.8
RPUSD3-201ENST00000383820 MTMR3Q13615 1198 aa20.03■□□□□ 0.8
RPUSD3-201ENST00000383820 PPP4R3AQ6IN85 833 aa20.03■□□□□ 0.8
RPUSD3-201ENST00000383820 KIAA1841Q6NSI8 718 aa20.03■□□□□ 0.8
RPUSD3-201ENST00000383820 PPFIBP1Q86W92 1011 aa20.03■□□□□ 0.8
RPUSD3-201ENST00000383820 TMEM173Q86WV6 379 aaPredicted RBP20.03■□□□□ 0.8
RPUSD3-201ENST00000383820 KREMEN2Q8NCW0 462 aa20.03■□□□□ 0.8
RPUSD3-201ENST00000383820 TSHZ2Q9NRE2 1034 aa20.03■□□□□ 0.8
RPUSD3-201ENST00000383820 AGPAT5Q9NUQ2 364 aa20.03■□□□□ 0.8
RPUSD3-201ENST00000383820 VAV3Q9UKW4 847 aa20.03■□□□□ 0.8
RPUSD3-201ENST00000383820 COL4A3BPQ9Y5P4 624 aa20.03■□□□□ 0.8
RPUSD3-201ENST00000383820 CCDC194A0A1B0GVG4 234 aa20.02■□□□□ 0.8
RPUSD3-201ENST00000383820 C2CD4DB7Z1M9 353 aa20.02■□□□□ 0.8
RPUSD3-201ENST00000383820 EML1O00423 815 aa20.02■□□□□ 0.8
RPUSD3-201ENST00000383820 TBX3O15119 743 aa20.02■□□□□ 0.8
RPUSD3-201ENST00000383820 CDKL5O76039 1030 aa20.02■□□□□ 0.8
RPUSD3-201ENST00000383820 P4HBP07237 508 aaKnown RBP20.02■□□□□ 0.8
RPUSD3-201ENST00000383820 SP100P23497 879 aaPredicted RBP20.02■□□□□ 0.8
RPUSD3-201ENST00000383820 RFC5P40937 340 aa20.02■□□□□ 0.8
RPUSD3-201ENST00000383820 VCPP55072 806 aaKnown RBP20.02■□□□□ 0.8
RPUSD3-201ENST00000383820 LETM2Q2VYF4 491 aa20.02■□□□□ 0.8
RPUSD3-201ENST00000383820 ATAT1Q5SQI0 421 aa20.02■□□□□ 0.8
RPUSD3-201ENST00000383820 PLA2G4FQ68DD2 849 aa20.02■□□□□ 0.8
RPUSD3-201ENST00000383820 SRGAP1Q7Z6B7 1085 aa20.02■□□□□ 0.8
RPUSD3-201ENST00000383820 MRPL10Q7Z7H8 261 aaKnown RBP20.02■□□□□ 0.8
RPUSD3-201ENST00000383820 NEK8Q86SG6 692 aa20.02■□□□□ 0.8
RPUSD3-201ENST00000383820 KSR1Q8IVT5 923 aa20.02■□□□□ 0.8
RPUSD3-201ENST00000383820 ZDHHC14Q8IZN3 488 aa20.02■□□□□ 0.8
RPUSD3-201ENST00000383820 URGCPQ8TCY9 931 aa20.02■□□□□ 0.8
RPUSD3-201ENST00000383820 SLC22A17Q8WUG5 538 aa20.02■□□□□ 0.8
RPUSD3-201ENST00000383820 AIFM3Q96NN9 605 aa20.02■□□□□ 0.8
RPUSD3-201ENST00000383820 NAP1L4Q99733 375 aaKnown RBP20.02■□□□□ 0.8
RPUSD3-201ENST00000383820 PHF20Q9BVI0 1012 aa20.02■□□□□ 0.8
RPUSD3-201ENST00000383820 DHX33Q9H6R0 707 aaKnown RBP20.02■□□□□ 0.8
RPUSD3-201ENST00000383820 CDH22Q9UJ99 828 aa20.02■□□□□ 0.8
RPUSD3-201ENST00000383820 USTQ9Y2C2 406 aa20.02■□□□□ 0.8
RPUSD3-201ENST00000383820 INPP5FQ9Y2H2 1132 aa20.02■□□□□ 0.8
RPUSD3-201ENST00000383820 PCDHB2Q9Y5E7 798 aa20.02■□□□□ 0.8
RPUSD3-201ENST00000383820 CNTNAP2Q9UHC6 1331 aa20.02■□□□□ 0.79
RPUSD3-201ENST00000383820 MEIS3P2A8K0S8 358 aa20.01■□□□□ 0.79
RPUSD3-201ENST00000383820 GAS2O43903 313 aaKnown RBP20.01■□□□□ 0.79
RPUSD3-201ENST00000383820 XBP1P17861 261 aa20.01■□□□□ 0.79
RPUSD3-201ENST00000383820 RARS2Q5T160 578 aaKnown RBP20.01■□□□□ 0.79
RPUSD3-201ENST00000383820 C4orf19Q8IY42 314 aa20.01■□□□□ 0.79
RPUSD3-201ENST00000383820 PLCD3Q8N3E9 789 aa20.01■□□□□ 0.79
RPUSD3-201ENST00000383820 PSPC1Q8WXF1 523 aaKnown RBP20.01■□□□□ 0.79
RPUSD3-201ENST00000383820 AUTS2Q8WXX7 1259 aa20.01■□□□□ 0.79
RPUSD3-201ENST00000383820 CEP170P1Q96L14 293 aa20.01■□□□□ 0.79
RPUSD3-201ENST00000383820 PHOX2BQ99453 314 aa20.01■□□□□ 0.79
RPUSD3-201ENST00000383820 KANSL3Q9P2N6 904 aa20.01■□□□□ 0.79
RPUSD3-201ENST00000383820 ASAP2O43150 1006 aa20■□□□□ 0.79
RPUSD3-201ENST00000383820 SLC11A1P49279 550 aa20■□□□□ 0.79
RPUSD3-201ENST00000383820 NPEPPSP55786 919 aa20■□□□□ 0.79
RPUSD3-201ENST00000383820 STK3Q13188 491 aa20■□□□□ 0.79
RPUSD3-201ENST00000383820 EPHA7Q15375 998 aa20■□□□□ 0.79
RPUSD3-201ENST00000383820 LONRF3Q496Y0 759 aa20■□□□□ 0.79
RPUSD3-201ENST00000383820 AGMOQ6ZNB7 445 aa20■□□□□ 0.79
RPUSD3-201ENST00000383820 TDRD5Q8NAT2 981 aaKnown RBP20■□□□□ 0.79
RPUSD3-201ENST00000383820 BCL7CQ8WUZ0 217 aaPredicted RBP20■□□□□ 0.79
RPUSD3-201ENST00000383820 TCP11Q8WWU5 503 aa20■□□□□ 0.79
RPUSD3-201ENST00000383820 PRPF31Q8WWY3 499 aaKnown RBP20■□□□□ 0.79
RPUSD3-201ENST00000383820 TMEM175Q9BSA9 504 aa20■□□□□ 0.79
RPUSD3-201ENST00000383820 SLKQ9H2G2 1235 aaPredicted RBP20■□□□□ 0.79
RPUSD3-201ENST00000383820 PDRG1Q9NUG6 133 aa20■□□□□ 0.79
RPUSD3-201ENST00000383820 DNAJB4Q9UDY4 337 aa20■□□□□ 0.79
RPUSD3-201ENST00000383820 KCNJ14Q9UNX9 436 aa20■□□□□ 0.79
RPUSD3-201ENST00000383820 STK36Q9NRP7 1315 aa20■□□□□ 0.79
RPUSD3-201ENST00000383820 EPCAMP16422 314 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms