RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 ZBTB39O15060 712 aa20.28■□□□□ 0.84
CSPG5-202ENST00000383738 MSH4O15457 936 aa20.28■□□□□ 0.84
CSPG5-202ENST00000383738 DAPK3O43293 454 aa20.28■□□□□ 0.84
CSPG5-202ENST00000383738 ZNF211Q13398 564 aaPredicted RBP20.28■□□□□ 0.84
CSPG5-202ENST00000383738 TRIP13Q15645 432 aaPredicted RBP20.28■□□□□ 0.84
CSPG5-202ENST00000383738 TAF12Q16514 161 aa20.28■□□□□ 0.84
CSPG5-202ENST00000383738 SCYL3Q8IZE3 742 aa20.28■□□□□ 0.84
CSPG5-202ENST00000383738 EPHX2P34913 555 aa20.28■□□□□ 0.84
CSPG5-202ENST00000383738 SNX1Q13596 522 aa20.28■□□□□ 0.84
CSPG5-202ENST00000383738 SPDYE2Q495Y8 402 aa20.28■□□□□ 0.84
CSPG5-202ENST00000383738 CATSPER3Q86XQ3 398 aa20.28■□□□□ 0.84
CSPG5-202ENST00000383738 RNF34Q969K3 372 aa20.28■□□□□ 0.84
CSPG5-202ENST00000383738 ATP6V1G3Q96LB4 118 aa20.28■□□□□ 0.84
CSPG5-202ENST00000383738 SLC40A1Q9NP59 571 aa20.28■□□□□ 0.84
CSPG5-202ENST00000383738 USP20Q9Y2K6 914 aa20.28■□□□□ 0.84
CSPG5-202ENST00000383738 PPP1R18Q6NYC8 613 aa20.28■□□□□ 0.84
CSPG5-202ENST00000383738 KIF2BQ8N4N8 673 aa20.28■□□□□ 0.84
CSPG5-202ENST00000383738 STMN2Q93045 179 aa20.28■□□□□ 0.84
CSPG5-202ENST00000383738 FAM163AQ96GL9 167 aaPredicted RBP20.28■□□□□ 0.84
CSPG5-202ENST00000383738 MSTO1Q9BUK6 570 aa20.28■□□□□ 0.84
CSPG5-202ENST00000383738 FBXL5Q9UKA1 691 aa20.28■□□□□ 0.84
CSPG5-202ENST00000383738 TMX2Q9Y320 296 aa20.28■□□□□ 0.84
CSPG5-202ENST00000383738 PCDHB4Q9Y5E5 795 aa20.28■□□□□ 0.84
CSPG5-202ENST00000383738 USH1CQ9Y6N9 552 aa20.28■□□□□ 0.84
CSPG5-202ENST00000383738 GOLGA8SH3BPF8 625 aa20.27■□□□□ 0.84
CSPG5-202ENST00000383738 IFNB1P01574 187 aa20.27■□□□□ 0.84
CSPG5-202ENST00000383738 MYL3P08590 195 aa20.27■□□□□ 0.84
CSPG5-202ENST00000383738 BACE1P56817 501 aa20.27■□□□□ 0.84
CSPG5-202ENST00000383738 SEL1L2Q5TEA6 688 aa20.27■□□□□ 0.84
CSPG5-202ENST00000383738 NT5C1BQ96P26 610 aa20.27■□□□□ 0.84
CSPG5-202ENST00000383738 ZNF302Q9NR11 478 aa20.27■□□□□ 0.84
CSPG5-202ENST00000383738 KLHL14Q9P2G3 628 aa20.27■□□□□ 0.84
CSPG5-202ENST00000383738 SALL1Q9NSC2 1324 aa20.27■□□□□ 0.84
CSPG5-202ENST00000383738 ACSL3O95573 720 aa20.27■□□□□ 0.84
CSPG5-202ENST00000383738 MYBP10242 640 aa20.27■□□□□ 0.84
CSPG5-202ENST00000383738 MDH1P40925 334 aaKnown RBP20.27■□□□□ 0.84
CSPG5-202ENST00000383738 LRRC71Q8N4P6 559 aa20.27■□□□□ 0.84
CSPG5-202ENST00000383738 TRPM4Q8TD43 1214 aa20.27■□□□□ 0.84
CSPG5-202ENST00000383738 JPH1Q9HDC5 661 aaPredicted RBP20.27■□□□□ 0.84
CSPG5-202ENST00000383738 HMGB1P1B2RPK0 211 aaPredicted RBP20.27■□□□□ 0.84
CSPG5-202ENST00000383738 DYNC1LI2O43237 492 aaPredicted RBP20.27■□□□□ 0.84
CSPG5-202ENST00000383738 RPS12P25398 132 aaKnown RBP20.27■□□□□ 0.84
CSPG5-202ENST00000383738 DPYDQ12882 1025 aa20.27■□□□□ 0.84
CSPG5-202ENST00000383738 NAIF1Q69YI7 327 aaPredicted RBP20.27■□□□□ 0.84
CSPG5-202ENST00000383738 FBXO40Q9UH90 709 aa20.27■□□□□ 0.84
CSPG5-202ENST00000383738 TTLL3Q9Y4R7 772 aa20.27■□□□□ 0.84
CSPG5-202ENST00000383738 YWHABP31946 246 aaKnown RBP20.27■□□□□ 0.83
CSPG5-202ENST00000383738 SPOUT1Q5T280 376 aaKnown RBP20.27■□□□□ 0.83
CSPG5-202ENST00000383738 CCDC13Q8IYE1 715 aa20.27■□□□□ 0.83
CSPG5-202ENST00000383738 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.27■□□□□ 0.83
CSPG5-202ENST00000383738 EPN3Q9H201 632 aa20.27■□□□□ 0.83
CSPG5-202ENST00000383738 SLC9A2Q9UBY0 812 aa20.27■□□□□ 0.83
CSPG5-202ENST00000383738 SOX10P56693 466 aa20.26■□□□□ 0.83
CSPG5-202ENST00000383738 KNOP1Q1ED39 458 aaKnown RBP20.26■□□□□ 0.83
CSPG5-202ENST00000383738 HAUS6Q7Z4H7 955 aa20.26■□□□□ 0.83
CSPG5-202ENST00000383738 MCUR1Q96AQ8 359 aa20.26■□□□□ 0.83
CSPG5-202ENST00000383738 MTUS1Q9ULD2 1270 aa20.26■□□□□ 0.83
CSPG5-202ENST00000383738 HPSEQ9Y251 543 aa20.26■□□□□ 0.83
CSPG5-202ENST00000383738 TXNDC9O14530 226 aa20.26■□□□□ 0.83
CSPG5-202ENST00000383738 DIAPH2O60879 1101 aa20.26■□□□□ 0.83
CSPG5-202ENST00000383738 MED24O75448 989 aa20.26■□□□□ 0.83
CSPG5-202ENST00000383738 TNNC2P02585 160 aa20.26■□□□□ 0.83
CSPG5-202ENST00000383738 PSMC6P62333 389 aa20.26■□□□□ 0.83
CSPG5-202ENST00000383738 KRT76Q01546 638 aa20.26■□□□□ 0.83
CSPG5-202ENST00000383738 PPFIBP2Q8ND30 876 aa20.26■□□□□ 0.83
CSPG5-202ENST00000383738 VIPAS39Q9H9C1 493 aa20.26■□□□□ 0.83
CSPG5-202ENST00000383738 CSDE1O75534 798 aaKnown RBP20.26■□□□□ 0.83
CSPG5-202ENST00000383738 PAX7P23759 505 aa20.26■□□□□ 0.83
CSPG5-202ENST00000383738 TAOK1Q7L7X3 1001 aa20.26■□□□□ 0.83
CSPG5-202ENST00000383738 ANKRD13AQ8IZ07 590 aa20.26■□□□□ 0.83
CSPG5-202ENST00000383738 RGL2O15211 777 aa20.25■□□□□ 0.83
CSPG5-202ENST00000383738 FGGP02679 453 aa20.25■□□□□ 0.83
CSPG5-202ENST00000383738 ALDH3A1P30838 453 aa20.25■□□□□ 0.83
CSPG5-202ENST00000383738 NT5C2P49902 561 aa20.25■□□□□ 0.83
CSPG5-202ENST00000383738 SEZ6Q53EL9 994 aa20.25■□□□□ 0.83
CSPG5-202ENST00000383738 PASD1Q8IV76 773 aa20.25■□□□□ 0.83
CSPG5-202ENST00000383738 DAAM1Q9Y4D1 1078 aa20.25■□□□□ 0.83
CSPG5-202ENST00000383738 A0A087X0B3 334 aa20.25■□□□□ 0.83
CSPG5-202ENST00000383738 PGRMC1O00264 195 aaKnown RBP20.25■□□□□ 0.83
CSPG5-202ENST00000383738 ACOT2P49753 483 aa20.25■□□□□ 0.83
CSPG5-202ENST00000383738 LRRC63Q05C16 580 aa20.25■□□□□ 0.83
CSPG5-202ENST00000383738 TEX2Q8IWB9 1127 aa20.25■□□□□ 0.83
CSPG5-202ENST00000383738 FMO2Q99518 471 aa20.25■□□□□ 0.83
CSPG5-202ENST00000383738 NUB1Q9Y5A7 615 aa20.25■□□□□ 0.83
CSPG5-202ENST00000383738 PPP1R3GB7ZBB8 358 aa20.25■□□□□ 0.83
CSPG5-202ENST00000383738 MYL1P05976 194 aa20.25■□□□□ 0.83
CSPG5-202ENST00000383738 PSMC5P62195 406 aa20.25■□□□□ 0.83
CSPG5-202ENST00000383738 KAZNQ674X7 775 aa20.25■□□□□ 0.83
CSPG5-202ENST00000383738 VPS52Q8N1B4 723 aa20.25■□□□□ 0.83
CSPG5-202ENST00000383738 THAP9Q9H5L6 903 aa20.25■□□□□ 0.83
CSPG5-202ENST00000383738 RIOX1Q9H6W3 641 aa20.25■□□□□ 0.83
CSPG5-202ENST00000383738 IKBKGQ9Y6K9 419 aa20.25■□□□□ 0.83
CSPG5-202ENST00000383738 PDS5AQ29RF7 1337 aaKnown RBP20.24■□□□□ 0.83
CSPG5-202ENST00000383738 TNPO2O14787 897 aaKnown RBP20.24■□□□□ 0.83
CSPG5-202ENST00000383738 CLDN3O15551 220 aa20.24■□□□□ 0.83
CSPG5-202ENST00000383738 ACTN1P12814 892 aa20.24■□□□□ 0.83
CSPG5-202ENST00000383738 GBP1P32455 592 aa20.24■□□□□ 0.83
CSPG5-202ENST00000383738 RASIP1Q5U651 963 aa20.24■□□□□ 0.83
CSPG5-202ENST00000383738 CYP4F22Q6NT55 531 aa20.24■□□□□ 0.83
CSPG5-202ENST00000383738 CATSPER4Q7RTX7 472 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms