RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 ASLP04424 464 aa22.54■■□□□ 1.2
NKX3-2-201ENST00000382438 RASSF2P50749 326 aa22.54■■□□□ 1.2
NKX3-2-201ENST00000382438 CBX3Q13185 183 aa22.54■■□□□ 1.2
NKX3-2-201ENST00000382438 SRRM1Q8IYB3 904 aaKnown RBP22.54■■□□□ 1.2
NKX3-2-201ENST00000382438 CADM1Q9BY67 442 aaKnown RBP22.54■■□□□ 1.2
NKX3-2-201ENST00000382438 TCP11L1Q9NUJ3 509 aa22.54■■□□□ 1.2
NKX3-2-201ENST00000382438 AMOTL2Q9Y2J4 779 aa22.54■■□□□ 1.2
NKX3-2-201ENST00000382438 ITGA2BP08514 1039 aa22.54■■□□□ 1.2
NKX3-2-201ENST00000382438 YARSP54577 528 aaKnown RBP22.54■■□□□ 1.2
NKX3-2-201ENST00000382438 TTLL12Q14166 644 aaPredicted RBP22.54■■□□□ 1.2
NKX3-2-201ENST00000382438 LDHAL6AQ6ZMR3 332 aa22.54■■□□□ 1.2
NKX3-2-201ENST00000382438 IRF2BP2Q7Z5L9 587 aa22.54■■□□□ 1.2
NKX3-2-201ENST00000382438 SLFN11Q7Z7L1 901 aa22.54■■□□□ 1.2
NKX3-2-201ENST00000382438 ZNF184Q99676 751 aaPredicted RBP22.54■■□□□ 1.2
NKX3-2-201ENST00000382438 TMOD4Q9NZQ9 345 aa22.54■■□□□ 1.2
NKX3-2-201ENST00000382438 PITPNM2Q9BZ72 1349 aa22.54■■□□□ 1.2
NKX3-2-201ENST00000382438 CCDC194A0A1B0GVG4 234 aa22.53■■□□□ 1.2
NKX3-2-201ENST00000382438 MYMKA6NI61 221 aa22.53■■□□□ 1.2
NKX3-2-201ENST00000382438 RPL13P26373 211 aaKnown RBP22.53■■□□□ 1.2
NKX3-2-201ENST00000382438 PPP1R2P41236 205 aa22.53■■□□□ 1.2
NKX3-2-201ENST00000382438 SMC1BQ8NDV3 1235 aa22.53■■□□□ 1.2
NKX3-2-201ENST00000382438 FAM89AQ96GI7 184 aa22.53■■□□□ 1.2
NKX3-2-201ENST00000382438 PTPN4P29074 926 aa22.53■■□□□ 1.2
NKX3-2-201ENST00000382438 TECP42680 631 aa22.53■■□□□ 1.2
NKX3-2-201ENST00000382438 CDR2Q01850 454 aa22.53■■□□□ 1.2
NKX3-2-201ENST00000382438 PPP2R5BQ15173 497 aa22.53■■□□□ 1.2
NKX3-2-201ENST00000382438 DUS1LQ6P1R4 473 aaKnown RBP22.53■■□□□ 1.2
NKX3-2-201ENST00000382438 SPATA24Q86W54 205 aa22.53■■□□□ 1.2
NKX3-2-201ENST00000382438 MPP4Q96JB8 637 aa22.53■■□□□ 1.2
NKX3-2-201ENST00000382438 CLMNQ96JQ2 1002 aa22.53■■□□□ 1.2
NKX3-2-201ENST00000382438 COL4A3BPQ9Y5P4 624 aa22.53■■□□□ 1.2
NKX3-2-201ENST00000382438 NMT2O60551 498 aa22.53■■□□□ 1.2
NKX3-2-201ENST00000382438 RARGP13631 454 aa22.53■■□□□ 1.2
NKX3-2-201ENST00000382438 MKRN3Q13064 507 aaKnown RBP22.53■■□□□ 1.2
NKX3-2-201ENST00000382438 SYNE4Q8N205 404 aa22.53■■□□□ 1.2
NKX3-2-201ENST00000382438 HELBQ8NG08 1087 aaPredicted RBP22.53■■□□□ 1.2
NKX3-2-201ENST00000382438 WDR60Q8WVS4 1066 aa22.53■■□□□ 1.2
NKX3-2-201ENST00000382438 ASCC2Q9H1I8 757 aaPredicted RBP22.53■■□□□ 1.2
NKX3-2-201ENST00000382438 CDC42EP4Q9H3Q1 356 aaKnown RBP22.53■■□□□ 1.2
NKX3-2-201ENST00000382438 RNF41Q9H4P4 317 aaPredicted RBP22.53■■□□□ 1.2
NKX3-2-201ENST00000382438 PHTF1Q9UMS5 762 aa22.53■■□□□ 1.2
NKX3-2-201ENST00000382438 GMEB1Q9Y692 573 aa22.53■■□□□ 1.2
NKX3-2-201ENST00000382438 AKAP11Q9UKA4 1901 aa22.52■■□□□ 1.2
NKX3-2-201ENST00000382438 FAM187AA6NFU0 413 aa22.52■■□□□ 1.2
NKX3-2-201ENST00000382438 SNAP23O00161 211 aa22.52■■□□□ 1.2
NKX3-2-201ENST00000382438 PSMG1O95456 288 aa22.52■■□□□ 1.2
NKX3-2-201ENST00000382438 EYA4O95677 639 aa22.52■■□□□ 1.2
NKX3-2-201ENST00000382438 CD151P48509 253 aa22.52■■□□□ 1.2
NKX3-2-201ENST00000382438 PLOD1Q02809 727 aaPredicted RBP22.52■■□□□ 1.2
NKX3-2-201ENST00000382438 AP1B1Q10567 949 aa22.52■■□□□ 1.2
NKX3-2-201ENST00000382438 IFIT5Q13325 482 aaKnown RBP22.52■■□□□ 1.2
NKX3-2-201ENST00000382438 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.52■■□□□ 1.22e-15■■■■■ 177.8
NKX3-2-201ENST00000382438 CENPKQ9BS16 269 aa22.52■■□□□ 1.2
NKX3-2-201ENST00000382438 NKIRAS1Q9NYS0 192 aa22.52■■□□□ 1.2
NKX3-2-201ENST00000382438 CLIC5Q9NZA1 410 aa22.52■■□□□ 1.2
NKX3-2-201ENST00000382438 PASKQ96RG2 1323 aa22.52■■□□□ 1.2
NKX3-2-201ENST00000382438 OR6B1O95007 311 aa22.52■■□□□ 1.2
NKX3-2-201ENST00000382438 SERPINB3P29508 390 aa22.52■■□□□ 1.2
NKX3-2-201ENST00000382438 TTLL11Q8NHH1 800 aa22.52■■□□□ 1.2
NKX3-2-201ENST00000382438 LENG1Q96BZ8 264 aaPredicted RBP22.52■■□□□ 1.2
NKX3-2-201ENST00000382438 IQCGQ9H095 443 aaKnown RBP22.52■■□□□ 1.2
NKX3-2-201ENST00000382438 USP40Q9NVE5 1235 aa22.52■■□□□ 1.2
NKX3-2-201ENST00000382438 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.52■■□□□ 1.2
NKX3-2-201ENST00000382438 RASAL2Q9UJF2 1139 aa22.52■■□□□ 1.2
NKX3-2-201ENST00000382438 DDX3XO00571 662 aaKnown RBP eCLIP22.51■■□□□ 1.191e-11■■■■■ 89.2
NKX3-2-201ENST00000382438 MAGEB3O15480 346 aa22.51■■□□□ 1.19
NKX3-2-201ENST00000382438 H2AFZP0C0S5 128 aa22.51■■□□□ 1.19
NKX3-2-201ENST00000382438 PTGIRP43119 386 aa22.51■■□□□ 1.19
NKX3-2-201ENST00000382438 AMPD3Q01432 767 aa22.51■■□□□ 1.19
NKX3-2-201ENST00000382438 TMED1Q13445 227 aa22.51■■□□□ 1.19
NKX3-2-201ENST00000382438 ZRSR2Q15696 482 aaKnown RBP22.51■■□□□ 1.19
NKX3-2-201ENST00000382438 H2AFVQ71UI9 128 aa22.51■■□□□ 1.19
NKX3-2-201ENST00000382438 U2AF1L4Q8WU68 220 aaKnown RBP22.51■■□□□ 1.19
NKX3-2-201ENST00000382438 NUMBLQ9Y6R0 609 aa22.51■■□□□ 1.19
NKX3-2-201ENST00000382438 ARFGEF2Q9Y6D5 1785 aa22.51■■□□□ 1.19
NKX3-2-201ENST00000382438 A0A0J9YVX5 310 aa22.51■■□□□ 1.19
NKX3-2-201ENST00000382438 DDX3YO15523 660 aaKnown RBP22.51■■□□□ 1.19
NKX3-2-201ENST00000382438 SLC9A1P19634 815 aa22.51■■□□□ 1.19
NKX3-2-201ENST00000382438 RXRBP28702 533 aa22.51■■□□□ 1.19
NKX3-2-201ENST00000382438 PPP2R5CQ13362 524 aa22.51■■□□□ 1.19
NKX3-2-201ENST00000382438 CFAP157Q5JU67 520 aa22.51■■□□□ 1.19
NKX3-2-201ENST00000382438 RNF168Q8IYW5 571 aaPredicted RBP22.51■■□□□ 1.19
NKX3-2-201ENST00000382438 SH3TC2Q8TF17 1288 aa22.51■■□□□ 1.19
NKX3-2-201ENST00000382438 TBC1D7Q9P0N9 293 aa22.51■■□□□ 1.19
NKX3-2-201ENST00000382438 LMTK3Q96Q04 1460 aa22.51■■□□□ 1.19
NKX3-2-201ENST00000382438 VAV1P15498 845 aa22.5■■□□□ 1.19
NKX3-2-201ENST00000382438 ABCB4P21439 1286 aa22.5■■□□□ 1.19
NKX3-2-201ENST00000382438 PABPC4Q13310 644 aaKnown RBP eCLIP22.5■■□□□ 1.19
NKX3-2-201ENST00000382438 RRP1BQ14684 758 aaKnown RBP22.5■■□□□ 1.19
NKX3-2-201ENST00000382438 TTC27Q6P3X3 843 aa22.5■■□□□ 1.19
NKX3-2-201ENST00000382438 ARHGEF18Q6ZSZ5 1173 aa22.5■■□□□ 1.19
NKX3-2-201ENST00000382438 GUF1Q8N442 669 aaKnown RBP22.5■■□□□ 1.19
NKX3-2-201ENST00000382438 NAT14Q8WUY8 206 aa22.5■■□□□ 1.19
NKX3-2-201ENST00000382438 GRAMD1AQ96CP6 724 aa22.5■■□□□ 1.19
NKX3-2-201ENST00000382438 CDK5RAP3Q96JB5 506 aa22.5■■□□□ 1.19
NKX3-2-201ENST00000382438 ABCB11O95342 1321 aa22.5■■□□□ 1.19
NKX3-2-201ENST00000382438 CCDC166P0CW27 439 aa22.5■■□□□ 1.19
NKX3-2-201ENST00000382438 EPS15P42566 896 aa22.5■■□□□ 1.19
NKX3-2-201ENST00000382438 LRRC63Q05C16 580 aa22.5■■□□□ 1.19
NKX3-2-201ENST00000382438 SYCE1Q8N0S2 351 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms