RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 SSTR3P32745 418 aaPredicted RBP6.23□□□□□ -1.41
RFX3-204ENST00000382004 TMED10P49755 219 aaKnown RBP6.23□□□□□ -1.41
RFX3-204ENST00000382004 CACNB2Q08289 660 aaPredicted RBP6.23□□□□□ -1.41
RFX3-204ENST00000382004 LRRC14Q15048 493 aa6.23□□□□□ -1.41
RFX3-204ENST00000382004 KLHL38Q2WGJ6 581 aa6.23□□□□□ -1.41
RFX3-204ENST00000382004 ZNF667Q5HYK9 610 aa6.23□□□□□ -1.41
RFX3-204ENST00000382004 DDX53Q86TM3 631 aaKnown RBP6.23□□□□□ -1.41
RFX3-204ENST00000382004 TMA16Q96EY4 203 aaKnown RBP6.23□□□□□ -1.41
RFX3-204ENST00000382004 SLC52A2Q9HAB3 445 aa6.23□□□□□ -1.41
RFX3-204ENST00000382004 PCSK1NQ9UHG2 260 aa6.23□□□□□ -1.41
RFX3-204ENST00000382004 DOLKQ9UPQ8 538 aa6.23□□□□□ -1.41
RFX3-204ENST00000382004 TNRQ92752 1358 aa6.23□□□□□ -1.41
RFX3-204ENST00000382004 CHUKO15111 745 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 MOCS2O96007 188 aaPredicted RBP6.22□□□□□ -1.41
RFX3-204ENST00000382004 MAGEA9P43362 315 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 HNRNPH2P55795 449 aaKnown RBP6.22□□□□□ -1.41
RFX3-204ENST00000382004 CTTNQ14247 550 aaKnown RBP6.22□□□□□ -1.41
RFX3-204ENST00000382004 INPP5AQ14642 412 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 TSC22D1Q15714 1073 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 TBC1D9BQ66K14 1250 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 GSPT2Q8IYD1 628 aaKnown RBP6.22□□□□□ -1.41
RFX3-204ENST00000382004 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.22□□□□□ -1.41
RFX3-204ENST00000382004 SMARCAD1Q9H4L7 1026 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 RPAP3Q9H6T3 665 aaPredicted RBP6.22□□□□□ -1.41
RFX3-204ENST00000382004 ALG13Q9NP73 1137 aaKnown RBP6.22□□□□□ -1.41
RFX3-204ENST00000382004 ANGPT2O15123 496 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 AKAP10O43572 662 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 ENO1P06733 434 aaKnown RBP6.22□□□□□ -1.41
RFX3-204ENST00000382004 MAPRE1Q15691 268 aaKnown RBP6.22□□□□□ -1.41
RFX3-204ENST00000382004 UBE2SQ16763 222 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 OPTNQ96CV9 577 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 TUBGCP3Q96CW5 907 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 AK8Q96MA6 479 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 BBS2Q9BXC9 721 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 GCOM2Q9BZD3 368 aaPredicted RBP6.22□□□□□ -1.41
RFX3-204ENST00000382004 SAMSN1Q9NSI8 373 aaKnown RBP6.22□□□□□ -1.41
RFX3-204ENST00000382004 DTNAQ9Y4J8 743 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 SESN1Q9Y6P5 492 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 COPB2P35606 906 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 NKX1-1Q15270 411 aaPredicted RBP6.22□□□□□ -1.41
RFX3-204ENST00000382004 MEI1Q5TIA1 1274 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 DEPDC7Q96QD5 511 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 SH3GL1Q99961 368 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 CFAP65Q6ZU64 1925 aaKnown RBP6.22□□□□□ -1.41
RFX3-204ENST00000382004 DENND3A2RUS2 1198 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 PRKCQQ04759 706 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 C16orf72Q14CZ0 275 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 C11orf96Q7Z7L8 435 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 DTX3LQ8TDB6 740 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.22□□□□□ -1.41
RFX3-204ENST00000382004 VMP1Q96GC9 406 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 ACAP3Q96P50 834 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 SIK2Q9H0K1 926 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 ETNK1Q9HBU6 452 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 CAPN10Q9HC96 672 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 CNOT8Q9UFF9 292 aaKnown RBP6.22□□□□□ -1.41
RFX3-204ENST00000382004 LINC00854A0A1B0GVQ3 168 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 ATP9BO43861 1147 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 KLHL18O94889 574 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 CLK1P49759 484 aaKnown RBP6.22□□□□□ -1.41
RFX3-204ENST00000382004 NAALADL2Q58DX5 795 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 CAPRIN2Q6IMN6 1127 aaKnown RBP6.22□□□□□ -1.41
RFX3-204ENST00000382004 CCDC103Q8IW40 242 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 RNF25Q96BH1 459 aaPredicted RBP6.22□□□□□ -1.41
RFX3-204ENST00000382004 RBM41Q96IZ5 413 aaKnown RBP6.22□□□□□ -1.41
RFX3-204ENST00000382004 CDHR1Q96JP9 859 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 SRGAP2O75044 1071 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 FKBP9O95302 570 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 PYGMP11217 842 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 PLCG1P19174 1290 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 PDIA3P30101 505 aaKnown RBP6.22□□□□□ -1.41
RFX3-204ENST00000382004 NCALDP61601 193 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 ZNF699Q32M78 642 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 C6orf10Q5SRN2 563 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 TWF2Q6IBS0 349 aaKnown RBP6.22□□□□□ -1.41
RFX3-204ENST00000382004 C11orf57Q6ZUT1 292 aaPredicted RBP6.22□□□□□ -1.41
RFX3-204ENST00000382004 FKBP9P1Q75LS8 142 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 C16orf62Q7Z3J2 963 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 TLK2Q86UE8 772 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 URGCPQ8TCY9 931 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 TM6SF1Q9BZW5 370 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 RWDD2AQ9UIY3 292 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 HOXA13P31271 388 aaPredicted RBP6.22□□□□□ -1.41
RFX3-204ENST00000382004 DEFA1P59665 94 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 DEFA3P59666 94 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 MAPRE2Q15555 327 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 KIZQ2M2Z5 673 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 SYTL3Q4VX76 610 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 ALFQ53S48 1182 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 GPATCH4Q5T3I0 446 aaKnown RBP6.22□□□□□ -1.41
RFX3-204ENST00000382004 SYDE2Q5VT97 1194 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 HEATR6Q6AI08 1181 aaKnown RBP6.22□□□□□ -1.41
RFX3-204ENST00000382004 HORMAD1Q86X24 394 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 NSMCE4AQ9NXX6 385 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 HSPBP1Q9NZL4 362 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 GTF2A1LQ9UNN4 478 aa6.22□□□□□ -1.41
RFX3-204ENST00000382004 TLR2O60603 784 aa6.21□□□□□ -1.41
RFX3-204ENST00000382004 PPP6R2O75170 966 aa6.21□□□□□ -1.41
RFX3-204ENST00000382004 TYK2P29597 1187 aa6.21□□□□□ -1.41
RFX3-204ENST00000382004 NUP62P37198 522 aaPredicted RBP6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms