RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 MBTD1Q05BQ5 628 aa17.07■□□□□ 0.32
PDGFB-202ENST00000381551 POSTNQ15063 836 aa17.07■□□□□ 0.32
PDGFB-202ENST00000381551 PLEKHG4Q58EX7 1191 aa17.07■□□□□ 0.32
PDGFB-202ENST00000381551 UNC13DQ70J99 1090 aa17.07■□□□□ 0.32
PDGFB-202ENST00000381551 DEFB128Q7Z7B8 93 aa17.07■□□□□ 0.32
PDGFB-202ENST00000381551 DEPTORQ8TB45 409 aa17.07■□□□□ 0.32
PDGFB-202ENST00000381551 KIFC3Q9BVG8 833 aa17.07■□□□□ 0.32
PDGFB-202ENST00000381551 C2orf40Q9H1Z8 148 aa17.07■□□□□ 0.32
PDGFB-202ENST00000381551 IL23AQ9NPF7 189 aa17.07■□□□□ 0.32
PDGFB-202ENST00000381551 SEL1LQ9UBV2 794 aa17.07■□□□□ 0.32
PDGFB-202ENST00000381551 PADI3Q9ULW8 664 aa17.07■□□□□ 0.32
PDGFB-202ENST00000381551 ST3GAL5Q9UNP4 418 aa17.07■□□□□ 0.32
PDGFB-202ENST00000381551 GPR182O15218 404 aa17.06■□□□□ 0.32
PDGFB-202ENST00000381551 SLC16A4O15374 487 aa17.06■□□□□ 0.32
PDGFB-202ENST00000381551 MAPTP10636 758 aaKnown RBP17.06■□□□□ 0.32
PDGFB-202ENST00000381551 CD52P31358 61 aa17.06■□□□□ 0.32
PDGFB-202ENST00000381551 EFNA5P52803 228 aa17.06■□□□□ 0.32
PDGFB-202ENST00000381551 EPHB4P54760 987 aa17.06■□□□□ 0.32
PDGFB-202ENST00000381551 NCKAP1LP55160 1127 aa17.06■□□□□ 0.32
PDGFB-202ENST00000381551 EHHADHQ08426 723 aa17.06■□□□□ 0.32
PDGFB-202ENST00000381551 PPIGQ13427 754 aaKnown RBP eCLIP17.06■□□□□ 0.329e-9■■■■■ 34
PDGFB-202ENST00000381551 PNOCQ13519 176 aa17.06■□□□□ 0.32
PDGFB-202ENST00000381551 ZNF720Q7Z2F6 126 aa17.06■□□□□ 0.32
PDGFB-202ENST00000381551 FAM228AQ86W67 206 aa17.06■□□□□ 0.32
PDGFB-202ENST00000381551 SFR1Q86XK3 245 aa17.06■□□□□ 0.32
PDGFB-202ENST00000381551 ZBTB8OSQ8IWT0 167 aa17.06■□□□□ 0.32
PDGFB-202ENST00000381551 FAM178BQ8IXR5 827 aa17.06■□□□□ 0.32
PDGFB-202ENST00000381551 TMEM161BQ8NDZ6 487 aa17.06■□□□□ 0.32
PDGFB-202ENST00000381551 DBF4BQ8NFT6 615 aa17.06■□□□□ 0.32
PDGFB-202ENST00000381551 KCNN1Q92952 543 aa17.06■□□□□ 0.32
PDGFB-202ENST00000381551 FZD8Q9H461 694 aa17.06■□□□□ 0.32
PDGFB-202ENST00000381551 TMEM134Q9H6X4 195 aa17.06■□□□□ 0.32
PDGFB-202ENST00000381551 ERVK-5Q9HDB9 667 aa17.06■□□□□ 0.32
PDGFB-202ENST00000381551 ARHGAP28Q9P2N2 729 aa17.06■□□□□ 0.32
PDGFB-202ENST00000381551 HOOK1Q9UJC3 728 aaKnown RBP17.06■□□□□ 0.32
PDGFB-202ENST00000381551 SCN5AQ14524 2016 aa17.06■□□□□ 0.32
PDGFB-202ENST00000381551 SIP14410 1827 aa17.05■□□□□ 0.32
PDGFB-202ENST00000381551 INO80B-WBP1J3KQ70 363 aa17.05■□□□□ 0.32
PDGFB-202ENST00000381551 K7ERI5 159 aa17.05■□□□□ 0.32
PDGFB-202ENST00000381551 RPN1P04843 607 aaKnown RBP17.05■□□□□ 0.32
PDGFB-202ENST00000381551 PFKMP08237 780 aa17.05■□□□□ 0.32
PDGFB-202ENST00000381551 ACRP10323 421 aa17.05■□□□□ 0.32
PDGFB-202ENST00000381551 FGFR4P22455 802 aa17.05■□□□□ 0.32
PDGFB-202ENST00000381551 NMT1P30419 496 aaKnown RBP17.05■□□□□ 0.32
PDGFB-202ENST00000381551 MAGEA10P43363 369 aaPredicted RBP17.05■□□□□ 0.32
PDGFB-202ENST00000381551 NFX1Q12986 1120 aaKnown RBP17.05■□□□□ 0.32
PDGFB-202ENST00000381551 COASYQ13057 564 aa17.05■□□□□ 0.32
PDGFB-202ENST00000381551 PAK2Q13177 524 aa17.05■□□□□ 0.32
PDGFB-202ENST00000381551 PCBP1Q15365 356 aaKnown RBP eCLIP17.05■□□□□ 0.32
PDGFB-202ENST00000381551 TCTN1Q2MV58 587 aa17.05■□□□□ 0.32
PDGFB-202ENST00000381551 HAUS6Q7Z4H7 955 aa17.05■□□□□ 0.32
PDGFB-202ENST00000381551 SEPT8Q92599 483 aa17.05■□□□□ 0.32
PDGFB-202ENST00000381551 IFIH1Q9BYX4 1025 aaKnown RBP17.05■□□□□ 0.32
PDGFB-202ENST00000381551 CCDC113Q9H0I3 377 aa17.05■□□□□ 0.32
PDGFB-202ENST00000381551 TMX1Q9H3N1 280 aa17.05■□□□□ 0.32
PDGFB-202ENST00000381551 ST6GALNAC4Q9H4F1 302 aa17.05■□□□□ 0.32
PDGFB-202ENST00000381551 OLFML3Q9NRN5 406 aa17.05■□□□□ 0.32
PDGFB-202ENST00000381551 TBC1D7Q9P0N9 293 aa17.05■□□□□ 0.32
PDGFB-202ENST00000381551 MYH11P35749 1972 aa17.05■□□□□ 0.32
PDGFB-202ENST00000381551 TET1Q8NFU7 2136 aa17.05■□□□□ 0.32
PDGFB-202ENST00000381551 TANC1Q9C0D5 1861 aa17.04■□□□□ 0.32
PDGFB-202ENST00000381551 DENND3A2RUS2 1198 aa17.04■□□□□ 0.32
PDGFB-202ENST00000381551 H0YCG3 227 aa17.04■□□□□ 0.32
PDGFB-202ENST00000381551 MBD3O95983 291 aa17.04■□□□□ 0.32
PDGFB-202ENST00000381551 SCP2P22307 547 aa17.04■□□□□ 0.32
PDGFB-202ENST00000381551 SFPQP23246 707 aaKnown RBP eCLIP17.04■□□□□ 0.32
PDGFB-202ENST00000381551 SARSP49591 514 aaKnown RBP17.04■□□□□ 0.32
PDGFB-202ENST00000381551 GTF2BQ00403 316 aa17.04■□□□□ 0.32
PDGFB-202ENST00000381551 CAMK4Q16566 473 aa17.04■□□□□ 0.32
PDGFB-202ENST00000381551 MAPK6Q16659 721 aa17.04■□□□□ 0.32
PDGFB-202ENST00000381551 AMHR2Q16671 573 aa17.04■□□□□ 0.32
PDGFB-202ENST00000381551 FAM187BQ17R55 369 aa17.04■□□□□ 0.32
PDGFB-202ENST00000381551 KMT5BQ4FZB7 885 aa17.04■□□□□ 0.32
PDGFB-202ENST00000381551 FAM43BQ6ZT52 329 aaPredicted RBP17.04■□□□□ 0.32
PDGFB-202ENST00000381551 TAS1R3Q7RTX0 852 aa17.04■□□□□ 0.32
PDGFB-202ENST00000381551 SLC17A8Q8NDX2 589 aa17.04■□□□□ 0.32
PDGFB-202ENST00000381551 SPATA20Q8TB22 786 aa17.04■□□□□ 0.32
PDGFB-202ENST00000381551 APBB2Q92870 758 aa17.04■□□□□ 0.32
PDGFB-202ENST00000381551 HPS3Q969F9 1004 aa17.04■□□□□ 0.32
PDGFB-202ENST00000381551 STRA6Q9BX79 667 aa17.04■□□□□ 0.32
PDGFB-202ENST00000381551 MRPL44Q9H9J2 332 aaKnown RBP17.04■□□□□ 0.32
PDGFB-202ENST00000381551 PRMT7Q9NVM4 692 aaPredicted RBP17.04■□□□□ 0.32
PDGFB-202ENST00000381551 PCDHA5Q9Y5H7 936 aa17.04■□□□□ 0.32
PDGFB-202ENST00000381551 LTBP2Q14767 1821 aa17.04■□□□□ 0.32
PDGFB-202ENST00000381551 ACKR2O00590 384 aa17.03■□□□□ 0.32
PDGFB-202ENST00000381551 FGBP02675 491 aa17.03■□□□□ 0.32
PDGFB-202ENST00000381551 HOXA11P31270 313 aaPredicted RBP17.03■□□□□ 0.32
PDGFB-202ENST00000381551 PSMD2Q13200 908 aa17.03■□□□□ 0.32
PDGFB-202ENST00000381551 KCNB1Q14721 858 aa17.03■□□□□ 0.32
PDGFB-202ENST00000381551 ZC2HC1CQ53FD0 456 aaPredicted RBP17.03■□□□□ 0.32
PDGFB-202ENST00000381551 CNKSR3Q6P9H4 555 aa17.03■□□□□ 0.32
PDGFB-202ENST00000381551 PPP4R3CPQ6ZMV5 832 aa17.03■□□□□ 0.32
PDGFB-202ENST00000381551 ZNF365Q70YC5 407 aa17.03■□□□□ 0.32
PDGFB-202ENST00000381551 CATSPER4Q7RTX7 472 aa17.03■□□□□ 0.32
PDGFB-202ENST00000381551 RTN4RL1Q86UN2 441 aaPredicted RBP17.03■□□□□ 0.32
PDGFB-202ENST00000381551 ERCC4Q92889 916 aaPredicted RBP17.03■□□□□ 0.32
PDGFB-202ENST00000381551 PRIMPOLQ96LW4 560 aa17.03■□□□□ 0.32
PDGFB-202ENST00000381551 GDF15Q99988 308 aa17.03■□□□□ 0.32
PDGFB-202ENST00000381551 CLSTN2Q9H4D0 955 aa17.03■□□□□ 0.32
PDGFB-202ENST00000381551 CHST12Q9NRB3 414 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms