RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 DIS3Q9Y2L1 958 aaKnown RBP18.35■□□□□ 0.53
SGCB-201ENST00000381431 EVI5O60447 810 aa18.35■□□□□ 0.53
SGCB-201ENST00000381431 ASPHQ12797 758 aa18.35■□□□□ 0.53
SGCB-201ENST00000381431 DDX42Q86XP3 938 aaKnown RBP eCLIP18.35■□□□□ 0.53
SGCB-201ENST00000381431 CCHCR1Q8TD31 782 aa18.35■□□□□ 0.53
SGCB-201ENST00000381431 AGXT2Q9BYV1 514 aa18.35■□□□□ 0.53
SGCB-201ENST00000381431 HEY1Q9Y5J3 304 aa18.35■□□□□ 0.53
SGCB-201ENST00000381431 CD163L1Q9NR16 1453 aa18.35■□□□□ 0.53
SGCB-201ENST00000381431 GRID2IPA4D2P6 1211 aa18.35■□□□□ 0.53
SGCB-201ENST00000381431 CARSP49589 748 aaKnown RBP18.35■□□□□ 0.53
SGCB-201ENST00000381431 SH2D4BQ5SQS7 431 aa18.35■□□□□ 0.53
SGCB-201ENST00000381431 SLC30A5Q8TAD4 765 aa18.35■□□□□ 0.53
SGCB-201ENST00000381431 LDHAP00338 332 aaKnown RBP18.34■□□□□ 0.53
SGCB-201ENST00000381431 RXRBP28702 533 aa18.34■□□□□ 0.53
SGCB-201ENST00000381431 PSMC5P62195 406 aa18.34■□□□□ 0.53
SGCB-201ENST00000381431 FBXL13Q8NEE6 735 aa18.34■□□□□ 0.53
SGCB-201ENST00000381431 TRIM51Q9BSJ1 452 aa18.34■□□□□ 0.53
SGCB-201ENST00000381431 INTUQ9ULD6 942 aa18.34■□□□□ 0.53
SGCB-201ENST00000381431 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.34■□□□□ 0.53
SGCB-201ENST00000381431 A0A0G2JND7 137 aa18.34■□□□□ 0.53
SGCB-201ENST00000381431 STXBP2Q15833 593 aa18.34■□□□□ 0.53
SGCB-201ENST00000381431 ZSCAN20P17040 1043 aaPredicted RBP18.34■□□□□ 0.53
SGCB-201ENST00000381431 CHRNA3P32297 505 aa18.34■□□□□ 0.53
SGCB-201ENST00000381431 CYP2C19P33261 490 aa18.34■□□□□ 0.53
SGCB-201ENST00000381431 COL9A3Q14050 684 aaPredicted RBP18.34■□□□□ 0.53
SGCB-201ENST00000381431 PPP1R2P3Q6NXS1 205 aa18.34■□□□□ 0.53
SGCB-201ENST00000381431 ADGRA1Q86SQ6 560 aa18.34■□□□□ 0.53
SGCB-201ENST00000381431 OR6B3Q8NGW1 331 aa18.34■□□□□ 0.53
SGCB-201ENST00000381431 OR2W6PQ8NHA6 318 aa18.34■□□□□ 0.53
SGCB-201ENST00000381431 SLITRK6Q9H5Y7 841 aa18.34■□□□□ 0.53
SGCB-201ENST00000381431 CCNA1P78396 465 aa18.33■□□□□ 0.53
SGCB-201ENST00000381431 NLRP14Q86W24 1093 aa18.33■□□□□ 0.53
SGCB-201ENST00000381431 MAML1Q92585 1016 aa18.33■□□□□ 0.53
SGCB-201ENST00000381431 NBPF3Q9H094 633 aa18.33■□□□□ 0.53
SGCB-201ENST00000381431 CLTCQ00610 1675 aaKnown RBP18.33■□□□□ 0.53
SGCB-201ENST00000381431 XPOTO43592 962 aaKnown RBP18.33■□□□□ 0.53
SGCB-201ENST00000381431 GARSP41250 739 aaKnown RBP18.33■□□□□ 0.53
SGCB-201ENST00000381431 AGPAT1Q99943 283 aa18.33■□□□□ 0.53
SGCB-201ENST00000381431 DDX23Q9BUQ8 820 aaKnown RBP18.33■□□□□ 0.53
SGCB-201ENST00000381431 LACRTQ9GZZ8 138 aa18.33■□□□□ 0.53
SGCB-201ENST00000381431 CPSF2Q9P2I0 782 aaKnown RBP18.33■□□□□ 0.53
SGCB-201ENST00000381431 CHORDC1Q9UHD1 332 aaPredicted RBP18.33■□□□□ 0.53
SGCB-201ENST00000381431 ZBTB12Q9Y330 459 aaPredicted RBP18.33■□□□□ 0.53
SGCB-201ENST00000381431 KIDINS220Q9ULH0 1771 aa18.33■□□□□ 0.52
SGCB-201ENST00000381431 H0Y3Z8 333 aa18.33■□□□□ 0.52
SGCB-201ENST00000381431 DALRD3Q5D0E6 543 aaKnown RBP18.33■□□□□ 0.52
SGCB-201ENST00000381431 RASIP1Q5U651 963 aa18.33■□□□□ 0.52
SGCB-201ENST00000381431 MIPOL1Q8TD10 442 aa18.33■□□□□ 0.52
SGCB-201ENST00000381431 PALM3A6NDB9 673 aaPredicted RBP18.33■□□□□ 0.52
SGCB-201ENST00000381431 SLC37A4O43826 429 aa18.33■□□□□ 0.52
SGCB-201ENST00000381431 CASP7P55210 303 aa18.33■□□□□ 0.52
SGCB-201ENST00000381431 IFT122Q9HBG6 1241 aa18.33■□□□□ 0.52
SGCB-201ENST00000381431 PRR12Q9ULL5 1215 aa18.33■□□□□ 0.52
SGCB-201ENST00000381431 PDS5AQ29RF7 1337 aaKnown RBP18.32■□□□□ 0.52
SGCB-201ENST00000381431 TRIM66O15016 1216 aa18.32■□□□□ 0.52
SGCB-201ENST00000381431 FGFR4P22455 802 aa18.32■□□□□ 0.52
SGCB-201ENST00000381431 GPR162Q16538 588 aa18.32■□□□□ 0.52
SGCB-201ENST00000381431 ZNF699Q32M78 642 aa18.32■□□□□ 0.52
SGCB-201ENST00000381431 ZNF568Q3ZCX4 644 aa18.32■□□□□ 0.52
SGCB-201ENST00000381431 SLC35G2Q8TBE7 412 aa18.32■□□□□ 0.52
SGCB-201ENST00000381431 PNKPQ96T60 521 aa18.32■□□□□ 0.52
SGCB-201ENST00000381431 PSMD14O00487 310 aa18.32■□□□□ 0.52
SGCB-201ENST00000381431 GNA15P30679 374 aa18.32■□□□□ 0.52
SGCB-201ENST00000381431 FMO5P49326 533 aa18.32■□□□□ 0.52
SGCB-201ENST00000381431 MYO1EQ12965 1108 aa18.32■□□□□ 0.52
SGCB-201ENST00000381431 SPARCL1Q14515 664 aa18.32■□□□□ 0.52
SGCB-201ENST00000381431 SEC23AQ15436 765 aa18.32■□□□□ 0.52
SGCB-201ENST00000381431 RBM41Q96IZ5 413 aaKnown RBP18.32■□□□□ 0.52
SGCB-201ENST00000381431 MYCBPQ99417 103 aaPredicted RBP18.32■□□□□ 0.52
SGCB-201ENST00000381431 MAD2L2Q9UI95 211 aa18.32■□□□□ 0.52
SGCB-201ENST00000381431 PPP1R37O75864 691 aa18.32■□□□□ 0.52
SGCB-201ENST00000381431 EARS2Q5JPH6 523 aaKnown RBP18.32■□□□□ 0.52
SGCB-201ENST00000381431 FAF2Q96CS3 445 aa18.32■□□□□ 0.52
SGCB-201ENST00000381431 KIAA1586Q9HCI6 787 aa18.32■□□□□ 0.52
SGCB-201ENST00000381431 HERC5Q9UII4 1024 aaKnown RBP18.32■□□□□ 0.52
SGCB-201ENST00000381431 FIS1Q9Y3D6 152 aa18.32■□□□□ 0.52
SGCB-201ENST00000381431 ESRRAP11474 423 aaPredicted RBP18.31■□□□□ 0.52
SGCB-201ENST00000381431 SCP2P22307 547 aa18.31■□□□□ 0.52
SGCB-201ENST00000381431 ABCD1P33897 745 aa18.31■□□□□ 0.52
SGCB-201ENST00000381431 ACTN3Q08043 901 aaPredicted RBP18.31■□□□□ 0.52
SGCB-201ENST00000381431 NFX1Q12986 1120 aaKnown RBP18.31■□□□□ 0.52
SGCB-201ENST00000381431 GPS1Q13098 491 aa18.31■□□□□ 0.52
SGCB-201ENST00000381431 PLAGL2Q9UPG8 496 aa18.31■□□□□ 0.52
SGCB-201ENST00000381431 FNDC3AQ9Y2H6 1198 aaKnown RBP18.31■□□□□ 0.52
SGCB-201ENST00000381431 PCDHA10Q9Y5I2 948 aa18.31■□□□□ 0.52
SGCB-201ENST00000381431 DIP2AQ14689 1571 aa18.31■□□□□ 0.52
SGCB-201ENST00000381431 MAP2P11137 1827 aaKnown RBP18.31■□□□□ 0.52
SGCB-201ENST00000381431 PI4K2BG5E9Z4 385 aa18.31■□□□□ 0.52
SGCB-201ENST00000381431 SURF1Q15526 300 aa18.31■□□□□ 0.52
SGCB-201ENST00000381431 SMAD1Q15797 465 aaKnown RBP18.31■□□□□ 0.52
SGCB-201ENST00000381431 INTS5Q6P9B9 1019 aaKnown RBP18.31■□□□□ 0.52
SGCB-201ENST00000381431 MMS22LQ6ZRQ5 1243 aa18.31■□□□□ 0.52
SGCB-201ENST00000381431 TXLNGQ9NUQ3 528 aa18.31■□□□□ 0.52
SGCB-201ENST00000381431 BCAP29Q9UHQ4 241 aa18.31■□□□□ 0.52
SGCB-201ENST00000381431 DCTN4Q9UJW0 460 aa18.31■□□□□ 0.52
SGCB-201ENST00000381431 MMEL1Q495T6 779 aa18.31■□□□□ 0.52
SGCB-201ENST00000381431 RC3H1Q5TC82 1133 aaKnown RBP18.31■□□□□ 0.52
SGCB-201ENST00000381431 MAP3K21Q5TCX8 1036 aa18.31■□□□□ 0.52
SGCB-201ENST00000381431 ILDR1Q86SU0 546 aaPredicted RBP18.31■□□□□ 0.52
SGCB-201ENST00000381431 PSPC1Q8WXF1 523 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms