RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 MTMR3Q13615 1198 aa13.72□□□□□ -0.21
PUDP-201ENST00000381077 COG2Q14746 738 aa13.72□□□□□ -0.21
PUDP-201ENST00000381077 C11orf63Q6NUN7 778 aa13.72□□□□□ -0.21
PUDP-201ENST00000381077 CCDC43Q96MW1 224 aaKnown RBP13.72□□□□□ -0.21
PUDP-201ENST00000381077 MYOZ2Q9NPC6 264 aa13.72□□□□□ -0.21
PUDP-201ENST00000381077 ZNF277Q9NRM2 450 aaPredicted RBP13.72□□□□□ -0.21
PUDP-201ENST00000381077 COL20A1Q9P218 1284 aa13.72□□□□□ -0.21
PUDP-201ENST00000381077 ZBED4O75132 1171 aa13.71□□□□□ -0.21
PUDP-201ENST00000381077 MTA2O94776 668 aa13.71□□□□□ -0.21
PUDP-201ENST00000381077 KCNA3P22001 575 aa13.71□□□□□ -0.21
PUDP-201ENST00000381077 GTF2H1P32780 548 aa13.71□□□□□ -0.21
PUDP-201ENST00000381077 RTP1P59025 263 aa13.71□□□□□ -0.21
PUDP-201ENST00000381077 UBXN2AP68543 259 aa13.71□□□□□ -0.21
PUDP-201ENST00000381077 ITGB3BPQ13352 177 aaPredicted RBP13.71□□□□□ -0.21
PUDP-201ENST00000381077 CIAPIN1Q6FI81 312 aa13.71□□□□□ -0.21
PUDP-201ENST00000381077 ZNF746Q6NUN9 644 aaPredicted RBP13.71□□□□□ -0.21
PUDP-201ENST00000381077 GJB7Q6PEY0 223 aa13.71□□□□□ -0.21
PUDP-201ENST00000381077 GPIHBP1Q8IV16 184 aa13.71□□□□□ -0.21
PUDP-201ENST00000381077 EFCAB13Q8IY85 973 aa13.71□□□□□ -0.21
PUDP-201ENST00000381077 SPIRE2Q8WWL2 714 aa13.71□□□□□ -0.21
PUDP-201ENST00000381077 CASKIN2Q8WXE0 1202 aa13.71□□□□□ -0.21
PUDP-201ENST00000381077 GPRASP2Q96D09 838 aa13.71□□□□□ -0.21
PUDP-201ENST00000381077 AGPAT1Q99943 283 aa13.71□□□□□ -0.21
PUDP-201ENST00000381077 FAM107BQ9H098 131 aa13.71□□□□□ -0.21
PUDP-201ENST00000381077 FAM114A2Q9NRY5 505 aa13.71□□□□□ -0.21
PUDP-201ENST00000381077 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.71□□□□□ -0.21
PUDP-201ENST00000381077 NFU1Q9UMS0 254 aa13.71□□□□□ -0.21
PUDP-201ENST00000381077 PACSIN2Q9UNF0 486 aaPredicted RBP13.71□□□□□ -0.21
PUDP-201ENST00000381077 ZBTB12Q9Y330 459 aaPredicted RBP13.71□□□□□ -0.21
PUDP-201ENST00000381077 TMCO5BA8MYB1 307 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 NFIBO00712 420 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 SART1O43290 800 aaKnown RBP13.7□□□□□ -0.22
PUDP-201ENST00000381077 ZEB2O60315 1214 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 GGPS1O95749 300 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 GBP1P32455 592 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 SMTNP53814 917 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 MRPS9P82933 396 aaKnown RBP13.7□□□□□ -0.22
PUDP-201ENST00000381077 PGM5Q15124 567 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 ZYXQ15942 572 aaKnown RBP13.7□□□□□ -0.22
PUDP-201ENST00000381077 MIGA2Q7L4E1 593 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 HAUS6Q7Z4H7 955 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 GLYCTKQ8IVS8 523 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 TSEN2Q8NCE0 465 aaKnown RBP13.7□□□□□ -0.22
PUDP-201ENST00000381077 SLC35G2Q8TBE7 412 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 ZIM3Q96PE6 472 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 NTPCRQ9BSD7 190 aaKnown RBP13.7□□□□□ -0.22
PUDP-201ENST00000381077 BCAS3Q9H6U6 928 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 COQ4Q9Y3A0 265 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 ASTN2O75129 1339 aaPredicted RBP13.7□□□□□ -0.22
PUDP-201ENST00000381077 EMSYQ7Z589 1322 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 GOLGA6L10A0A0M3HER8 536 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 HMGB1P1B2RPK0 211 aaPredicted RBP13.7□□□□□ -0.22
PUDP-201ENST00000381077 H0YCG3 227 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 KRIT1O00522 736 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 STAM2O75886 525 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 CXCL9Q07325 125 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 PLS1Q14651 629 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 SMYD5Q6GMV2 418 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 PHLDB3Q6NSJ2 640 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 LRRC31Q6UY01 552 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 TMC2Q8TDI7 906 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 KIFAP3Q92845 792 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 GDAP1L1Q96MZ0 367 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 RPS6KC1Q96S38 1066 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 GLIS2Q9BZE0 524 aaPredicted RBP13.7□□□□□ -0.22
PUDP-201ENST00000381077 RAB17Q9H0T7 212 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 HSPBP1Q9NZL4 362 aa13.7□□□□□ -0.22
PUDP-201ENST00000381077 SYNGAP1Q96PV0 1343 aa13.69□□□□□ -0.22
PUDP-201ENST00000381077 BUB1BO60566 1050 aaPredicted RBP13.69□□□□□ -0.22
PUDP-201ENST00000381077 TRIM49P0CI25 452 aa13.69□□□□□ -0.22
PUDP-201ENST00000381077 TRIM49CP0CI26 452 aa13.69□□□□□ -0.22
PUDP-201ENST00000381077 MXI1P50539 228 aa13.69□□□□□ -0.22
PUDP-201ENST00000381077 TGFB2P61812 414 aa13.69□□□□□ -0.22
PUDP-201ENST00000381077 OTUD6AQ7L8S5 288 aa13.69□□□□□ -0.22
PUDP-201ENST00000381077 MAP4K3Q8IVH8 894 aa13.69□□□□□ -0.22
PUDP-201ENST00000381077 RIN2Q8WYP3 895 aaPredicted RBP13.69□□□□□ -0.22
PUDP-201ENST00000381077 CDHR1Q96JP9 859 aa13.69□□□□□ -0.22
PUDP-201ENST00000381077 TEPSINQ96N21 525 aa13.69□□□□□ -0.22
PUDP-201ENST00000381077 RUNDC3BQ96NL0 473 aa13.69□□□□□ -0.22
PUDP-201ENST00000381077 PDCD2LQ9BRP1 358 aa13.69□□□□□ -0.22
PUDP-201ENST00000381077 CAPS2Q9BXY5 557 aa13.69□□□□□ -0.22
PUDP-201ENST00000381077 PXMP2Q9NR77 195 aa13.69□□□□□ -0.22
PUDP-201ENST00000381077 CTDP1Q9Y5B0 961 aaPredicted RBP13.69□□□□□ -0.22
PUDP-201ENST00000381077 FER1L6Q2WGJ9 1857 aa13.69□□□□□ -0.22
PUDP-201ENST00000381077 PARP14Q460N5 1801 aa13.69□□□□□ -0.22
PUDP-201ENST00000381077 FAM187AA6NFU0 413 aa13.69□□□□□ -0.22
PUDP-201ENST00000381077 DDX3YO15523 660 aaKnown RBP13.69□□□□□ -0.22
PUDP-201ENST00000381077 RTN2O75298 545 aa13.69□□□□□ -0.22
PUDP-201ENST00000381077 ALAS1P13196 640 aa13.69□□□□□ -0.22
PUDP-201ENST00000381077 DRG2P55039 364 aaKnown RBP13.69□□□□□ -0.22
PUDP-201ENST00000381077 RPS6P62753 249 aaKnown RBP13.69□□□□□ -0.22
PUDP-201ENST00000381077 DHX34Q14147 1143 aaKnown RBP13.69□□□□□ -0.22
PUDP-201ENST00000381077 ENOSF1Q7L5Y1 443 aa13.69□□□□□ -0.22
PUDP-201ENST00000381077 NLRX1Q86UT6 975 aa13.69□□□□□ -0.22
PUDP-201ENST00000381077 IFT81Q8WYA0 676 aa13.69□□□□□ -0.22
PUDP-201ENST00000381077 FBXL18Q96ME1 805 aa13.69□□□□□ -0.22
PUDP-201ENST00000381077 FAM129AQ9BZQ8 928 aa13.69□□□□□ -0.22
PUDP-201ENST00000381077 AS3MTQ9HBK9 375 aa13.69□□□□□ -0.22
PUDP-201ENST00000381077 UTP11Q9Y3A2 253 aaKnown RBP13.69□□□□□ -0.22
PUDP-201ENST00000381077 SAMM50Q9Y512 469 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms