RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 POTEGQ6S5H5 508 aa19.6■□□□□ 0.73
HMGN1-203ENST00000380748 GLB1LQ6UWU2 654 aa19.6■□□□□ 0.73
HMGN1-203ENST00000380748 ZNF280BQ86YH2 543 aa19.6■□□□□ 0.73
HMGN1-203ENST00000380748 SMAP1Q8IYB5 467 aaPredicted RBP19.6■□□□□ 0.73
HMGN1-203ENST00000380748 CMASQ8NFW8 434 aaPredicted RBP19.6■□□□□ 0.73
HMGN1-203ENST00000380748 MAP4K1Q92918 833 aa19.6■□□□□ 0.73
HMGN1-203ENST00000380748 FAM167AQ96KS9 214 aa19.6■□□□□ 0.73
HMGN1-203ENST00000380748 WDR6Q9NNW5 1121 aaKnown RBP19.6■□□□□ 0.73
HMGN1-203ENST00000380748 TCEAL9Q9UHQ7 104 aa19.6■□□□□ 0.73
HMGN1-203ENST00000380748 SIT1Q9Y3P8 196 aa19.6■□□□□ 0.73
HMGN1-203ENST00000380748 CHD8Q9HCK8 2581 aa19.59■□□□□ 0.73
HMGN1-203ENST00000380748 CLUHO75153 1309 aa19.59■□□□□ 0.73
HMGN1-203ENST00000380748 MAP1BP46821 2468 aaKnown RBP19.59■□□□□ 0.73
HMGN1-203ENST00000380748 CARNS1A5YM72 827 aa19.59■□□□□ 0.73
HMGN1-203ENST00000380748 SGSM2O43147 1006 aa19.59■□□□□ 0.73
HMGN1-203ENST00000380748 LILRB3O75022 631 aa19.59■□□□□ 0.73
HMGN1-203ENST00000380748 OFD1O75665 1012 aa19.59■□□□□ 0.73
HMGN1-203ENST00000380748 MYBP10242 640 aa19.59■□□□□ 0.73
HMGN1-203ENST00000380748 GLULP15104 373 aa19.59■□□□□ 0.73
HMGN1-203ENST00000380748 DRP2Q13474 957 aa19.59■□□□□ 0.73
HMGN1-203ENST00000380748 JAKMIP3Q5VZ66 844 aa19.59■□□□□ 0.73
HMGN1-203ENST00000380748 TWF2Q6IBS0 349 aaKnown RBP19.59■□□□□ 0.73
HMGN1-203ENST00000380748 PHLDB3Q6NSJ2 640 aa19.59■□□□□ 0.73
HMGN1-203ENST00000380748 TEX2Q8IWB9 1127 aa19.59■□□□□ 0.73
HMGN1-203ENST00000380748 CRYGNQ8WXF5 182 aa19.59■□□□□ 0.73
HMGN1-203ENST00000380748 RSPH1Q8WYR4 309 aa19.59■□□□□ 0.73
HMGN1-203ENST00000380748 ARHGEF3Q9NR81 526 aa19.59■□□□□ 0.73
HMGN1-203ENST00000380748 CHST12Q9NRB3 414 aa19.59■□□□□ 0.73
HMGN1-203ENST00000380748 TBC1D22BQ9NU19 505 aa19.59■□□□□ 0.73
HMGN1-203ENST00000380748 CFAP47Q6ZTR5 3102 aa19.58■□□□□ 0.73
HMGN1-203ENST00000380748 CCDC195A0A1B0GUA6 201 aa19.58■□□□□ 0.72
HMGN1-203ENST00000380748 OATP04181 439 aa19.58■□□□□ 0.72
HMGN1-203ENST00000380748 PRKCEQ02156 737 aa19.58■□□□□ 0.72
HMGN1-203ENST00000380748 MAML2Q8IZL2 1156 aaPredicted RBP19.58■□□□□ 0.72
HMGN1-203ENST00000380748 STAMQ92783 540 aa19.58■□□□□ 0.72
HMGN1-203ENST00000380748 TRAIPQ9BWF2 469 aa19.58■□□□□ 0.72
HMGN1-203ENST00000380748 FOXQ1Q9C009 403 aa19.58■□□□□ 0.72
HMGN1-203ENST00000380748 MRPL17Q9NRX2 175 aaKnown RBP19.58■□□□□ 0.72
HMGN1-203ENST00000380748 SAMM50Q9Y512 469 aa19.58■□□□□ 0.72
HMGN1-203ENST00000380748 CACNA1GO43497 2377 aa19.58■□□□□ 0.72
HMGN1-203ENST00000380748 C2CD2LO14523 706 aa19.57■□□□□ 0.72
HMGN1-203ENST00000380748 INPPL1O15357 1258 aa19.57■□□□□ 0.72
HMGN1-203ENST00000380748 LRRN2O75325 713 aa19.57■□□□□ 0.72
HMGN1-203ENST00000380748 CYP3A4P08684 503 aa19.57■□□□□ 0.72
HMGN1-203ENST00000380748 FUT2Q10981 343 aa19.57■□□□□ 0.72
HMGN1-203ENST00000380748 UGCGQ16739 394 aa19.57■□□□□ 0.72
HMGN1-203ENST00000380748 ST13P5Q8NFI4 369 aaPredicted RBP19.57■□□□□ 0.72
HMGN1-203ENST00000380748 GCOM2Q9BZD3 368 aaPredicted RBP19.57■□□□□ 0.72
HMGN1-203ENST00000380748 FAM105AQ9NUU6 356 aa19.57■□□□□ 0.72
HMGN1-203ENST00000380748 PIN4Q9Y237 131 aaKnown RBP19.57■□□□□ 0.72
HMGN1-203ENST00000380748 ADAMTS3O15072 1205 aa19.56■□□□□ 0.72
HMGN1-203ENST00000380748 KINO60870 393 aaKnown RBP19.56■□□□□ 0.72
HMGN1-203ENST00000380748 RFPL2O75678 378 aa19.56■□□□□ 0.72
HMGN1-203ENST00000380748 DDHD2O94830 711 aa19.56■□□□□ 0.72
HMGN1-203ENST00000380748 AFF1P51825 1210 aaKnown RBP19.56■□□□□ 0.72
HMGN1-203ENST00000380748 SETQ01105 290 aaPredicted RBP19.56■□□□□ 0.72
HMGN1-203ENST00000380748 DCLRE1AQ6PJP8 1040 aa19.56■□□□□ 0.72
HMGN1-203ENST00000380748 PJA1Q8NG27 643 aa19.56■□□□□ 0.72
HMGN1-203ENST00000380748 SMG7Q92540 1137 aaKnown RBP19.56■□□□□ 0.72
HMGN1-203ENST00000380748 NXPE3Q969Y0 559 aa19.56■□□□□ 0.72
HMGN1-203ENST00000380748 NRBP2Q9NSY0 501 aa19.56■□□□□ 0.72
HMGN1-203ENST00000380748 BARHL2Q9NY43 387 aa19.56■□□□□ 0.72
HMGN1-203ENST00000380748 V9GY48 417 aaPredicted RBP19.56■□□□□ 0.72
HMGN1-203ENST00000380748 CHD6Q8TD26 2715 aa19.56■□□□□ 0.72
HMGN1-203ENST00000380748 A0A087WZ62 844 aa19.55■□□□□ 0.72
HMGN1-203ENST00000380748 TEX28O15482 410 aa19.55■□□□□ 0.72
HMGN1-203ENST00000380748 SKIP12755 728 aa19.55■□□□□ 0.72
HMGN1-203ENST00000380748 SFPQP23246 707 aaKnown RBP eCLIP19.55■□□□□ 0.72
HMGN1-203ENST00000380748 AK2P54819 239 aa19.55■□□□□ 0.72
HMGN1-203ENST00000380748 PRR16Q569H4 304 aa19.55■□□□□ 0.72
HMGN1-203ENST00000380748 ZNF707Q96C28 371 aaPredicted RBP19.55■□□□□ 0.72
HMGN1-203ENST00000380748 FDXACB1Q9BRP7 624 aaPredicted RBP19.55■□□□□ 0.72
HMGN1-203ENST00000380748 STK39Q9UEW8 545 aa19.55■□□□□ 0.72
HMGN1-203ENST00000380748 COL4A3Q01955 1670 aa19.55■□□□□ 0.72
HMGN1-203ENST00000380748 WDR64B1ANS9 1081 aa19.54■□□□□ 0.72
HMGN1-203ENST00000380748 ZNF623O75123 536 aa19.54■□□□□ 0.72
HMGN1-203ENST00000380748 URODP06132 367 aa19.54■□□□□ 0.72
HMGN1-203ENST00000380748 ADH1AP07327 375 aa19.54■□□□□ 0.72
HMGN1-203ENST00000380748 ATXN1P54253 815 aaKnown RBP19.54■□□□□ 0.72
HMGN1-203ENST00000380748 HTR4Q13639 388 aa19.54■□□□□ 0.72
HMGN1-203ENST00000380748 AAMPQ13685 434 aa19.54■□□□□ 0.72
HMGN1-203ENST00000380748 VARS2Q5ST30 1063 aaKnown RBP19.54■□□□□ 0.72
HMGN1-203ENST00000380748 CYP26C1Q6V0L0 522 aa19.54■□□□□ 0.72
HMGN1-203ENST00000380748 TAS1R1Q7RTX1 841 aa19.54■□□□□ 0.72
HMGN1-203ENST00000380748 SGMS1Q86VZ5 419 aa19.54■□□□□ 0.72
HMGN1-203ENST00000380748 URGCPQ8TCY9 931 aa19.54■□□□□ 0.72
HMGN1-203ENST00000380748 RPS6KC1Q96S38 1066 aa19.54■□□□□ 0.72
HMGN1-203ENST00000380748 RHOBTB2Q9BYZ6 727 aa19.54■□□□□ 0.72
HMGN1-203ENST00000380748 GLT8D2Q9H1C3 349 aa19.54■□□□□ 0.72
HMGN1-203ENST00000380748 DISC1Q9NRI5 854 aa19.54■□□□□ 0.72
HMGN1-203ENST00000380748 NCDNQ9UBB6 729 aa19.54■□□□□ 0.72
HMGN1-203ENST00000380748 USP24Q9UPU5 2620 aa19.54■□□□□ 0.72
HMGN1-203ENST00000380748 MIA3Q5JRA6 1907 aa19.53■□□□□ 0.72
HMGN1-203ENST00000380748 hCG_1984214I3L0E3 225 aa19.53■□□□□ 0.72
HMGN1-203ENST00000380748 GLUD1P00367 558 aa19.53■□□□□ 0.72
HMGN1-203ENST00000380748 SOD2P04179 222 aa19.53■□□□□ 0.72
HMGN1-203ENST00000380748 SPATA31D3P0C874 917 aa19.53■□□□□ 0.72
HMGN1-203ENST00000380748 LAMP2P13473 410 aa19.53■□□□□ 0.72
HMGN1-203ENST00000380748 RAB27AP51159 221 aa19.53■□□□□ 0.72
HMGN1-203ENST00000380748 TARBP2Q15633 366 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms