RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 ANKEF1Q9NU02 776 aa10.29□□□□□ -0.76
HMGN1-202ENST00000380747 PADI3Q9ULW8 664 aa10.29□□□□□ -0.76
HMGN1-202ENST00000380747 PPME1Q9Y570 386 aa10.29□□□□□ -0.76
HMGN1-202ENST00000380747 SQORQ9Y6N5 450 aa10.29□□□□□ -0.76
HMGN1-202ENST00000380747 GBF1Q92538 1859 aa10.29□□□□□ -0.76
HMGN1-202ENST00000380747 KAT6AQ92794 2004 aa10.29□□□□□ -0.76
HMGN1-202ENST00000380747 TCF20Q9UGU0 1960 aaKnown RBP10.28□□□□□ -0.76
HMGN1-202ENST00000380747 IGKV6-21A0A0C4DH24 114 aa10.28□□□□□ -0.76
HMGN1-202ENST00000380747 ARHGEF35A5YM69 484 aa10.28□□□□□ -0.76
HMGN1-202ENST00000380747 BMP15O95972 392 aa10.28□□□□□ -0.76
HMGN1-202ENST00000380747 CA3P07451 260 aa10.28□□□□□ -0.76
HMGN1-202ENST00000380747 XRCC6P12956 609 aaKnown RBP eCLIP10.28□□□□□ -0.76
HMGN1-202ENST00000380747 IBSPP21815 317 aaPredicted RBP10.28□□□□□ -0.76
HMGN1-202ENST00000380747 CDC25AP30304 524 aa10.28□□□□□ -0.76
HMGN1-202ENST00000380747 GPC3P51654 580 aa10.28□□□□□ -0.76
HMGN1-202ENST00000380747 ODR4Q5SWX8 454 aa10.28□□□□□ -0.76
HMGN1-202ENST00000380747 POTEGQ6S5H5 508 aa10.28□□□□□ -0.76
HMGN1-202ENST00000380747 KSR1Q8IVT5 923 aa10.28□□□□□ -0.76
HMGN1-202ENST00000380747 MICALL1Q8N3F8 863 aa10.28□□□□□ -0.76
HMGN1-202ENST00000380747 IGSF22Q8N9C0 903 aa10.28□□□□□ -0.76
HMGN1-202ENST00000380747 TMEM40Q8WWA1 233 aa10.28□□□□□ -0.76
HMGN1-202ENST00000380747 TCP11Q8WWU5 503 aa10.28□□□□□ -0.76
HMGN1-202ENST00000380747 PSPC1Q8WXF1 523 aaKnown RBP10.28□□□□□ -0.76
HMGN1-202ENST00000380747 NLRP4Q96MN2 994 aa10.28□□□□□ -0.76
HMGN1-202ENST00000380747 MTRQ99707 1265 aa10.28□□□□□ -0.76
HMGN1-202ENST00000380747 ADAMTS10Q9H324 1103 aa10.28□□□□□ -0.76
HMGN1-202ENST00000380747 ZSCAN16Q9H4T2 348 aaPredicted RBP10.28□□□□□ -0.76
HMGN1-202ENST00000380747 EPHX3Q9H6B9 360 aa10.28□□□□□ -0.76
HMGN1-202ENST00000380747 DHX33Q9H6R0 707 aaKnown RBP10.28□□□□□ -0.76
HMGN1-202ENST00000380747 ERVK-5Q9HDB9 667 aa10.28□□□□□ -0.76
HMGN1-202ENST00000380747 KIAA1024Q9UPX6 916 aa10.28□□□□□ -0.76
HMGN1-202ENST00000380747 CLIC4Q9Y696 253 aa10.28□□□□□ -0.76
HMGN1-202ENST00000380747 MYH9P35579 1960 aaKnown RBP10.28□□□□□ -0.76
HMGN1-202ENST00000380747 TRIOO75962 3097 aa10.27□□□□□ -0.76
HMGN1-202ENST00000380747 A0A087WZ62 844 aa10.27□□□□□ -0.77
HMGN1-202ENST00000380747 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.27□□□□□ -0.77
HMGN1-202ENST00000380747 ENPP3O14638 875 aa10.27□□□□□ -0.77
HMGN1-202ENST00000380747 GPR182O15218 404 aa10.27□□□□□ -0.77
HMGN1-202ENST00000380747 GAS2O43903 313 aaKnown RBP10.27□□□□□ -0.77
HMGN1-202ENST00000380747 USO1O60763 962 aaKnown RBP10.27□□□□□ -0.77
HMGN1-202ENST00000380747 UPP2O95045 317 aa10.27□□□□□ -0.77
HMGN1-202ENST00000380747 RARRES1P49788 294 aa10.27□□□□□ -0.77
HMGN1-202ENST00000380747 CEBPZQ03701 1054 aaKnown RBP10.27□□□□□ -0.77
HMGN1-202ENST00000380747 SKIV2LQ15477 1246 aaKnown RBP10.27□□□□□ -0.77
HMGN1-202ENST00000380747 ECM1Q16610 540 aa10.27□□□□□ -0.77
HMGN1-202ENST00000380747 ARL6IP4Q66PJ3 421 aaKnown RBP10.27□□□□□ -0.77
HMGN1-202ENST00000380747 MAEAQ7L5Y9 396 aa10.27□□□□□ -0.77
HMGN1-202ENST00000380747 FAM228AQ86W67 206 aa10.27□□□□□ -0.77
HMGN1-202ENST00000380747 ZNF687Q8N1G0 1237 aa10.27□□□□□ -0.77
HMGN1-202ENST00000380747 PRPF31Q8WWY3 499 aaKnown RBP10.27□□□□□ -0.77
HMGN1-202ENST00000380747 HLA-CQ95604 372 aa10.27□□□□□ -0.77
HMGN1-202ENST00000380747 FDXACB1Q9BRP7 624 aaPredicted RBP10.27□□□□□ -0.77
HMGN1-202ENST00000380747 FTHL17Q9BXU8 183 aa10.27□□□□□ -0.77
HMGN1-202ENST00000380747 GCOM2Q9BZD3 368 aaPredicted RBP10.27□□□□□ -0.77
HMGN1-202ENST00000380747 ATP6V0A4Q9HBG4 840 aa10.27□□□□□ -0.77
HMGN1-202ENST00000380747 C11orf16Q9NQ32 467 aa10.27□□□□□ -0.77
HMGN1-202ENST00000380747 DDX19AQ9NUU7 478 aaKnown RBP10.27□□□□□ -0.77
HMGN1-202ENST00000380747 LMCD1Q9NZU5 365 aa10.27□□□□□ -0.77
HMGN1-202ENST00000380747 DBR1Q9UK59 544 aaKnown RBP10.27□□□□□ -0.77
HMGN1-202ENST00000380747 ST3GAL5Q9UNP4 418 aa10.27□□□□□ -0.77
HMGN1-202ENST00000380747 COL4A3BPQ9Y5P4 624 aa10.27□□□□□ -0.77
HMGN1-202ENST00000380747 DENND3A2RUS2 1198 aa10.26□□□□□ -0.77
HMGN1-202ENST00000380747 CSDE1O75534 798 aaKnown RBP10.26□□□□□ -0.77
HMGN1-202ENST00000380747 DGAT1O75907 488 aa10.26□□□□□ -0.77
HMGN1-202ENST00000380747 GJB5O95377 273 aa10.26□□□□□ -0.77
HMGN1-202ENST00000380747 SRGAP2CP0DJJ0 459 aa10.26□□□□□ -0.77
HMGN1-202ENST00000380747 ZSCAN22P10073 491 aaPredicted RBP10.26□□□□□ -0.77
HMGN1-202ENST00000380747 DARSP14868 501 aaKnown RBP10.26□□□□□ -0.77
HMGN1-202ENST00000380747 MUTP22033 750 aa10.26□□□□□ -0.77
HMGN1-202ENST00000380747 FGFR4P22455 802 aa10.26□□□□□ -0.77
HMGN1-202ENST00000380747 EIF4BP23588 611 aaKnown RBP10.26□□□□□ -0.77
HMGN1-202ENST00000380747 CDC42EP1Q00587 391 aa10.26□□□□□ -0.77
HMGN1-202ENST00000380747 TAP1Q03518 808 aa10.26□□□□□ -0.77
HMGN1-202ENST00000380747 LAMTOR4Q0VGL1 99 aa10.26□□□□□ -0.77
HMGN1-202ENST00000380747 BECN1Q14457 450 aa10.26□□□□□ -0.77
HMGN1-202ENST00000380747 RTN4RL1Q86UN2 441 aaPredicted RBP10.26□□□□□ -0.77
HMGN1-202ENST00000380747 ZNF410Q86VK4 478 aa10.26□□□□□ -0.77
HMGN1-202ENST00000380747 LINC01599Q8WXQ3 324 aa10.26□□□□□ -0.77
HMGN1-202ENST00000380747 CDK5RAP3Q96JB5 506 aa10.26□□□□□ -0.77
HMGN1-202ENST00000380747 PLIN2Q99541 437 aa10.26□□□□□ -0.77
HMGN1-202ENST00000380747 POLR3FQ9H1D9 316 aaPredicted RBP10.26□□□□□ -0.77
HMGN1-202ENST00000380747 BHMT2Q9H2M3 363 aa10.26□□□□□ -0.77
HMGN1-202ENST00000380747 TMX1Q9H3N1 280 aa10.26□□□□□ -0.77
HMGN1-202ENST00000380747 TMEM134Q9H6X4 195 aa10.26□□□□□ -0.77
HMGN1-202ENST00000380747 XPNPEP1Q9NQW7 623 aa10.26□□□□□ -0.77
HMGN1-202ENST00000380747 DNM3Q9UQ16 869 aa10.26□□□□□ -0.77
HMGN1-202ENST00000380747 SIP14410 1827 aa10.26□□□□□ -0.77
HMGN1-202ENST00000380747 TET1Q8NFU7 2136 aa10.25□□□□□ -0.77
HMGN1-202ENST00000380747 WDR81Q562E7 1941 aa10.25□□□□□ -0.77
HMGN1-202ENST00000380747 EPOPA6NHQ4 379 aa10.25□□□□□ -0.77
HMGN1-202ENST00000380747 E9PMD0 336 aa10.25□□□□□ -0.77
HMGN1-202ENST00000380747 PI4K2BG5E9Z4 385 aa10.25□□□□□ -0.77
HMGN1-202ENST00000380747 ASAP2O43150 1006 aa10.25□□□□□ -0.77
HMGN1-202ENST00000380747 MGEA5O60502 916 aa10.25□□□□□ -0.77
HMGN1-202ENST00000380747 F13A1P00488 732 aa10.25□□□□□ -0.77
HMGN1-202ENST00000380747 PDIA4P13667 645 aaKnown RBP10.25□□□□□ -0.77
HMGN1-202ENST00000380747 MARCKSP29966 332 aaPredicted RBP10.25□□□□□ -0.77
HMGN1-202ENST00000380747 UBA7P41226 1012 aa10.25□□□□□ -0.77
HMGN1-202ENST00000380747 GRIN1Q05586 938 aa10.25□□□□□ -0.77
HMGN1-202ENST00000380747 TFDP1Q14186 410 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms