RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 ITIH3Q06033 890 aa8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 ANGEL2Q5VTE6 544 aaKnown RBP8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 HAUS6Q7Z4H7 955 aa8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 SLC9A9Q8IVB4 645 aa8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 PLEKHO2Q8TD55 490 aa8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 INTS2Q9H0H0 1204 aaKnown RBP8.67□□□□□ -1.02
PDLIM5-204ENST00000380176 ZC3H4Q9UPT8 1303 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 FZD9O00144 591 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 PHACTR2O75167 634 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 SOX5P35711 763 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 STAT1P42224 750 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 NOP2P46087 812 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 MYL7Q01449 175 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 PPP3CAQ08209 521 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 ARHGAP44Q17R89 818 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 C1orf220Q5T0J3 134 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 GLYCTKQ8IVS8 523 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 SCYL3Q8IZE3 742 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 ZNF280CQ8ND82 737 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 REPS2Q8NFH8 660 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 SLC30A5Q8TAD4 765 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 U2AF1L4Q8WU68 220 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 KIFC3Q9BVG8 833 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 STK33Q9BYT3 514 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 MAP3K20Q9NYL2 800 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 EMSYQ7Z589 1322 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 BTNL10A8MVZ5 291 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 TMCO5BA8MYB1 307 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 SORBS3O60504 671 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 RGS20O76081 388 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 LYPLA2O95372 231 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 PAFAH1B1P43034 410 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 PPP2R5AQ15172 486 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 KCTD19Q17RG1 926 aaPredicted RBP8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 CFAP221Q4G0U5 840 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 XKR9Q5GH70 373 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 C10orf76Q5T2E6 689 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 SNRNP48Q6IEG0 339 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 ANO5Q75V66 913 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 PALB2Q86YC2 1186 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 C4orf19Q8IY42 314 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 MSL3Q8N5Y2 521 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 LRRC57Q8N9N7 239 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 TRPM4Q8TD43 1214 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 INPP4AQ96PE3 977 aaPredicted RBP8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 SELENOOQ9BVL4 669 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 APEX2Q9UBZ4 518 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 TSKSQ9UJT2 592 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 ZNF112Q9UJU3 913 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 HPCAL4Q9UM19 191 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 FAN1Q9Y2M0 1017 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 LCTP09848 1927 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 ARID2Q68CP9 1835 aa8.66□□□□□ -1.02
PDLIM5-204ENST00000380176 GOLGA8IPA6NC78 632 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 ZSCAN5CA6NGD5 496 aaPredicted RBP8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 ERICH4A6NGS2 130 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 GOLGA8JA6NMD2 632 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 FOXN3O00409 490 aaPredicted RBP8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 NR3C2P08235 984 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 FERP16591 822 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 MCM3P25205 808 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 GCLMP48507 274 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 PSMC5P62195 406 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 GTF2BQ00403 316 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 TMEM132BQ14DG7 1078 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 FAM102BQ5T8I3 360 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 DLK2Q6UY11 383 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 VSIG10LQ86VR7 867 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 EFCAB3Q8N7B9 438 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 TPCN2Q8NHX9 752 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 AENQ8WTP8 325 aaKnown RBP8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 RIN2Q8WYP3 895 aaPredicted RBP8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 ACCSQ96QU6 501 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 SYT11Q9BT88 431 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 CRISPLD2Q9H0B8 497 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 GINM1Q9NU53 330 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 HSPBP1Q9NZL4 362 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 VPS18Q9P253 973 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 ADAM21Q9UKJ8 722 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 ZNF214Q9UL59 606 aaPredicted RBP8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 WDR64B1ANS9 1081 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 ANKRD63C9JTQ0 380 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 ZNF862O60290 1169 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 PEX10O60683 326 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 SYF2O95926 243 aaKnown RBP8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 CYP2C19P33261 490 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 GALCP54803 685 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 SP4Q02446 784 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 CAMK2BQ13554 666 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 PRKG1Q13976 671 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 ARHGEF19Q8IW93 802 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 GOLGA5Q8TBA6 731 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 CCDC43Q96MW1 224 aaKnown RBP8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 MTFR1LQ9H019 292 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 TMEM206Q9H813 350 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 OSGEPQ9NPF4 335 aa8.65□□□□□ -1.02
PDLIM5-204ENST00000380176 TAS2R14Q9NYV8 317 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms