RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 CCDC148Q8NFR7 591 aa20■□□□□ 0.79
PDLIM4-202ENST00000379018 SLC22A17Q8WUG5 538 aa20■□□□□ 0.79
PDLIM4-202ENST00000379018 NKD2Q969F2 451 aaPredicted RBP20■□□□□ 0.79
PDLIM4-202ENST00000379018 ACSF2Q96CM8 615 aaPredicted RBP20■□□□□ 0.79
PDLIM4-202ENST00000379018 SFXN1Q9H9B4 322 aa20■□□□□ 0.79
PDLIM4-202ENST00000379018 CHST12Q9NRB3 414 aa20■□□□□ 0.79
PDLIM4-202ENST00000379018 FAM105AQ9NUU6 356 aa20■□□□□ 0.79
PDLIM4-202ENST00000379018 SUCLA2Q9P2R7 463 aaPredicted RBP20■□□□□ 0.79
PDLIM4-202ENST00000379018 VPS13AQ96RL7 3174 aa19.99■□□□□ 0.79
PDLIM4-202ENST00000379018 C2orf16Q68DN1 1984 aa19.99■□□□□ 0.79
PDLIM4-202ENST00000379018 DDX11L8A8MPP1 907 aa19.99■□□□□ 0.79
PDLIM4-202ENST00000379018 C2CD2LO14523 706 aa19.99■□□□□ 0.79
PDLIM4-202ENST00000379018 B4GALT3O60512 393 aa19.99■□□□□ 0.79
PDLIM4-202ENST00000379018 POLGP54098 1239 aaPredicted RBP19.99■□□□□ 0.79
PDLIM4-202ENST00000379018 GIT2Q14161 759 aa19.99■□□□□ 0.79
PDLIM4-202ENST00000379018 PTPN14Q15678 1187 aa19.99■□□□□ 0.79
PDLIM4-202ENST00000379018 SLC5A5Q92911 643 aa19.99■□□□□ 0.79
PDLIM4-202ENST00000379018 JAKMIP1Q96N16 626 aaKnown RBP19.99■□□□□ 0.79
PDLIM4-202ENST00000379018 RIT2Q99578 217 aa19.99■□□□□ 0.79
PDLIM4-202ENST00000379018 VN1R3Q9BXE9 311 aa19.99■□□□□ 0.79
PDLIM4-202ENST00000379018 USTQ9Y2C2 406 aa19.99■□□□□ 0.79
PDLIM4-202ENST00000379018 STK25O00506 426 aa19.98■□□□□ 0.79
PDLIM4-202ENST00000379018 PI15O43692 258 aa19.98■□□□□ 0.79
PDLIM4-202ENST00000379018 CLCN5P51795 746 aa19.98■□□□□ 0.79
PDLIM4-202ENST00000379018 TARBP2Q15633 366 aaKnown RBP19.98■□□□□ 0.79
PDLIM4-202ENST00000379018 PLA2G4FQ68DD2 849 aa19.98■□□□□ 0.79
PDLIM4-202ENST00000379018 OTOP3Q7RTS5 596 aa19.98■□□□□ 0.79
PDLIM4-202ENST00000379018 PPFIBP1Q86W92 1011 aa19.98■□□□□ 0.79
PDLIM4-202ENST00000379018 ZNF280BQ86YH2 543 aa19.98■□□□□ 0.79
PDLIM4-202ENST00000379018 ADSSL1Q8N142 457 aa19.98■□□□□ 0.79
PDLIM4-202ENST00000379018 SIX5Q8N196 739 aa19.98■□□□□ 0.79
PDLIM4-202ENST00000379018 URGCPQ8TCY9 931 aa19.98■□□□□ 0.79
PDLIM4-202ENST00000379018 EMILIN2Q9BXX0 1053 aa19.98■□□□□ 0.79
PDLIM4-202ENST00000379018 EDIL3O43854 480 aa19.97■□□□□ 0.79
PDLIM4-202ENST00000379018 OFD1O75665 1012 aa19.97■□□□□ 0.79
PDLIM4-202ENST00000379018 HMGB1P09429 215 aaKnown RBP19.97■□□□□ 0.79
PDLIM4-202ENST00000379018 SKIP12755 728 aa19.97■□□□□ 0.79
PDLIM4-202ENST00000379018 RFX1P22670 979 aa19.97■□□□□ 0.79
PDLIM4-202ENST00000379018 NLRP5P59047 1200 aa19.97■□□□□ 0.79
PDLIM4-202ENST00000379018 TDGQ13569 410 aa19.97■□□□□ 0.79
PDLIM4-202ENST00000379018 XKR3Q5GH77 459 aa19.97■□□□□ 0.79
PDLIM4-202ENST00000379018 GPR149Q86SP6 731 aa19.97■□□□□ 0.79
PDLIM4-202ENST00000379018 TBCKQ8TEA7 893 aa19.97■□□□□ 0.79
PDLIM4-202ENST00000379018 KLHL5Q96PQ7 755 aa19.97■□□□□ 0.79
PDLIM4-202ENST00000379018 FAM193BQ96PV7 902 aaPredicted RBP19.97■□□□□ 0.79
PDLIM4-202ENST00000379018 INO80BQ9C086 356 aaPredicted RBP19.97■□□□□ 0.79
PDLIM4-202ENST00000379018 BMP2KQ9NSY1 1161 aaPredicted RBP19.97■□□□□ 0.79
PDLIM4-202ENST00000379018 IRAK3Q9Y616 596 aa19.97■□□□□ 0.79
PDLIM4-202ENST00000379018 TDP2O95551 362 aa19.96■□□□□ 0.79
PDLIM4-202ENST00000379018 RAB27AP51159 221 aa19.96■□□□□ 0.79
PDLIM4-202ENST00000379018 CCT2P78371 535 aaKnown RBP19.96■□□□□ 0.79
PDLIM4-202ENST00000379018 TSGA10IPQ3SY00 556 aa19.96■□□□□ 0.79
PDLIM4-202ENST00000379018 ZNF410Q86VK4 478 aa19.96■□□□□ 0.79
PDLIM4-202ENST00000379018 NIFKQ9BYG3 293 aaKnown RBP19.96■□□□□ 0.79
PDLIM4-202ENST00000379018 NCOA5Q9HCD5 579 aaKnown RBP19.96■□□□□ 0.79
PDLIM4-202ENST00000379018 PCDHB2Q9Y5E7 798 aa19.96■□□□□ 0.79
PDLIM4-202ENST00000379018 NARSO43776 548 aaKnown RBP19.95■□□□□ 0.78
PDLIM4-202ENST00000379018 PSMD10O75832 226 aa19.95■□□□□ 0.78
PDLIM4-202ENST00000379018 DDHD2O94830 711 aa19.95■□□□□ 0.78
PDLIM4-202ENST00000379018 POMCP01189 267 aa19.95■□□□□ 0.78
PDLIM4-202ENST00000379018 CNPP09543 421 aaKnown RBP19.95■□□□□ 0.78
PDLIM4-202ENST00000379018 GBP2P32456 591 aaPredicted RBP19.95■□□□□ 0.78
PDLIM4-202ENST00000379018 CLCN4P51793 760 aa19.95■□□□□ 0.78
PDLIM4-202ENST00000379018 AK2P54819 239 aa19.95■□□□□ 0.78
PDLIM4-202ENST00000379018 CDC42EP1Q00587 391 aa19.95■□□□□ 0.78
PDLIM4-202ENST00000379018 ANGPT1Q15389 498 aa19.95■□□□□ 0.78
PDLIM4-202ENST00000379018 BMP2KLQ5H9B9 411 aa19.95■□□□□ 0.78
PDLIM4-202ENST00000379018 KCNG4Q8TDN1 519 aa19.95■□□□□ 0.78
PDLIM4-202ENST00000379018 PGBD4Q96DM1 585 aa19.95■□□□□ 0.78
PDLIM4-202ENST00000379018 KCNK12Q9HB15 430 aa19.95■□□□□ 0.78
PDLIM4-202ENST00000379018 MAN1C1Q9NR34 630 aa19.95■□□□□ 0.78
PDLIM4-202ENST00000379018 DUSP12Q9UNI6 340 aa19.95■□□□□ 0.78
PDLIM4-202ENST00000379018 PRG3Q9Y2Y8 225 aaPredicted RBP19.95■□□□□ 0.78
PDLIM4-202ENST00000379018 CARNS1A5YM72 827 aa19.94■□□□□ 0.78
PDLIM4-202ENST00000379018 CFHP08603 1231 aa19.94■□□□□ 0.78
PDLIM4-202ENST00000379018 NPR3P17342 541 aa19.94■□□□□ 0.78
PDLIM4-202ENST00000379018 AOC1P19801 751 aa19.94■□□□□ 0.78
PDLIM4-202ENST00000379018 USP11P51784 963 aa19.94■□□□□ 0.78
PDLIM4-202ENST00000379018 AFF1P51825 1210 aaKnown RBP19.94■□□□□ 0.78
PDLIM4-202ENST00000379018 FOXK2Q01167 660 aa19.94■□□□□ 0.78
PDLIM4-202ENST00000379018 LETM2Q2VYF4 491 aa19.94■□□□□ 0.78
PDLIM4-202ENST00000379018 BLOC1S2Q6QNY1 142 aa19.94■□□□□ 0.78
PDLIM4-202ENST00000379018 AGMOQ6ZNB7 445 aa19.94■□□□□ 0.78
PDLIM4-202ENST00000379018 CCDC105Q8IYK2 499 aa19.94■□□□□ 0.78
PDLIM4-202ENST00000379018 RDM1Q8NG50 284 aa19.94■□□□□ 0.78
PDLIM4-202ENST00000379018 CEP89Q96ST8 783 aa19.94■□□□□ 0.78
PDLIM4-202ENST00000379018 TRAIPQ9BWF2 469 aa19.94■□□□□ 0.78
PDLIM4-202ENST00000379018 RNF26Q9BY78 433 aaPredicted RBP19.94■□□□□ 0.78
PDLIM4-202ENST00000379018 RSAD1Q9HA92 442 aa19.94■□□□□ 0.78
PDLIM4-202ENST00000379018 MRPL17Q9NRX2 175 aaKnown RBP19.94■□□□□ 0.78
PDLIM4-202ENST00000379018 FAN1Q9Y2M0 1017 aa19.94■□□□□ 0.78
PDLIM4-202ENST00000379018 IGKV6-21A0A0C4DH24 114 aa19.93■□□□□ 0.78
PDLIM4-202ENST00000379018 CDC45O75419 566 aa19.93■□□□□ 0.78
PDLIM4-202ENST00000379018 MAFO75444 373 aaPredicted RBP19.93■□□□□ 0.78
PDLIM4-202ENST00000379018 STBD1O95210 358 aa19.93■□□□□ 0.78
PDLIM4-202ENST00000379018 URODP06132 367 aa19.93■□□□□ 0.78
PDLIM4-202ENST00000379018 SRGAP2CP0DJJ0 459 aa19.93■□□□□ 0.78
PDLIM4-202ENST00000379018 DTWD2Q8NBA8 298 aa19.93■□□□□ 0.78
PDLIM4-202ENST00000379018 RSAD2Q8WXG1 361 aa19.93■□□□□ 0.78
PDLIM4-202ENST00000379018 RSPH1Q8WYR4 309 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms