RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 GCLCP48506 637 aaPredicted RBP21.18■□□□□ 0.98
SSU72-204ENST00000378726 EXOC3L4Q17RC7 722 aa21.18■□□□□ 0.98
SSU72-204ENST00000378726 PDXDC1Q6P996 788 aa21.18■□□□□ 0.98
SSU72-204ENST00000378726 FBXO16Q8IX29 292 aaPredicted RBP21.18■□□□□ 0.98
SSU72-204ENST00000378726 MORC4Q8TE76 937 aa21.18■□□□□ 0.98
SSU72-204ENST00000378726 NRBP2Q9NSY0 501 aa21.18■□□□□ 0.98
SSU72-204ENST00000378726 ZBTB48P10074 688 aaPredicted RBP21.17■□□□□ 0.98
SSU72-204ENST00000378726 POLGP54098 1239 aaPredicted RBP21.17■□□□□ 0.98
SSU72-204ENST00000378726 TUBB2AQ13885 445 aa21.17■□□□□ 0.98
SSU72-204ENST00000378726 FAM160B1Q5W0V3 765 aa21.17■□□□□ 0.98
SSU72-204ENST00000378726 CST9Q5W186 159 aa21.17■□□□□ 0.98
SSU72-204ENST00000378726 TMEM174Q8WUU8 243 aa21.17■□□□□ 0.98
SSU72-204ENST00000378726 CCDC42Q96M95 316 aa21.17■□□□□ 0.98
SSU72-204ENST00000378726 NAPGQ99747 312 aaPredicted RBP21.17■□□□□ 0.98
SSU72-204ENST00000378726 CBWD1Q9BRT8 395 aa21.17■□□□□ 0.98
SSU72-204ENST00000378726 TUBB2BQ9BVA1 445 aa21.17■□□□□ 0.98
SSU72-204ENST00000378726 NIFKQ9BYG3 293 aaKnown RBP21.17■□□□□ 0.98
SSU72-204ENST00000378726 EXOC7Q9UPT5 735 aa21.17■□□□□ 0.98
SSU72-204ENST00000378726 REXO2Q9Y3B8 237 aaKnown RBP21.17■□□□□ 0.98
SSU72-204ENST00000378726 DENND3A2RUS2 1198 aa21.17■□□□□ 0.98
SSU72-204ENST00000378726 ASB14A6NK59 587 aa21.17■□□□□ 0.98
SSU72-204ENST00000378726 RHOXF2BP0C7M4 288 aa21.17■□□□□ 0.98
SSU72-204ENST00000378726 RTP1P59025 263 aa21.17■□□□□ 0.98
SSU72-204ENST00000378726 SNRPFP62306 86 aaKnown RBP21.17■□□□□ 0.98
SSU72-204ENST00000378726 IRX5P78411 483 aaPredicted RBP21.17■□□□□ 0.98
SSU72-204ENST00000378726 CELF3Q5SZQ8 465 aaKnown RBP21.17■□□□□ 0.98
SSU72-204ENST00000378726 C12orf56Q8IXR9 622 aa21.17■□□□□ 0.98
SSU72-204ENST00000378726 PTPN18Q99952 460 aa21.17■□□□□ 0.98
SSU72-204ENST00000378726 RHOXF2Q9BQY4 288 aa21.17■□□□□ 0.98
SSU72-204ENST00000378726 SUGCTQ9HAC7 445 aa21.17■□□□□ 0.98
SSU72-204ENST00000378726 ABCB6Q9NP58 842 aa21.17■□□□□ 0.98
SSU72-204ENST00000378726 NMRK2Q9NPI5 230 aa21.17■□□□□ 0.98
SSU72-204ENST00000378726 ARHGAP20Q9P2F6 1191 aa21.17■□□□□ 0.98
SSU72-204ENST00000378726 LOC102724159A0A0B4J2E5 919 aa21.16■□□□□ 0.98
SSU72-204ENST00000378726 ACTN1P12814 892 aa21.16■□□□□ 0.98
SSU72-204ENST00000378726 PON1P27169 355 aa21.16■□□□□ 0.98
SSU72-204ENST00000378726 PWP2Q15269 919 aaKnown RBP21.16■□□□□ 0.98
SSU72-204ENST00000378726 HSDL1Q3SXM5 330 aa21.16■□□□□ 0.98
SSU72-204ENST00000378726 GBP6Q6ZN66 633 aa21.16■□□□□ 0.98
SSU72-204ENST00000378726 IFT74Q96LB3 600 aa21.16■□□□□ 0.98
SSU72-204ENST00000378726 POLR3FQ9H1D9 316 aaPredicted RBP21.16■□□□□ 0.98
SSU72-204ENST00000378726 NUCKS1Q9H1E3 243 aaKnown RBP21.16■□□□□ 0.98
SSU72-204ENST00000378726 PDE11AQ9HCR9 933 aa21.16■□□□□ 0.98
SSU72-204ENST00000378726 MORF4L1Q9UBU8 362 aa21.16■□□□□ 0.98
SSU72-204ENST00000378726 ADAM21Q9UKJ8 722 aa21.16■□□□□ 0.98
SSU72-204ENST00000378726 PLEKP08567 350 aaPredicted RBP21.16■□□□□ 0.98
SSU72-204ENST00000378726 KRT83P78385 493 aa21.16■□□□□ 0.98
SSU72-204ENST00000378726 EMC2Q15006 297 aa21.16■□□□□ 0.98
SSU72-204ENST00000378726 PPP2R5AQ15172 486 aa21.16■□□□□ 0.98
SSU72-204ENST00000378726 DPY19L2P1Q6NXN4 242 aa21.16■□□□□ 0.98
SSU72-204ENST00000378726 CCDC62Q6P9F0 684 aa21.16■□□□□ 0.98
SSU72-204ENST00000378726 DHX37Q8IY37 1157 aaKnown RBP21.16■□□□□ 0.98
SSU72-204ENST00000378726 AFAP1L1Q8TED9 768 aa21.16■□□□□ 0.98
SSU72-204ENST00000378726 GANQ9H2C0 597 aa21.16■□□□□ 0.98
SSU72-204ENST00000378726 PLCB1Q9NQ66 1216 aa21.16■□□□□ 0.98
SSU72-204ENST00000378726 MYH9P35579 1960 aaKnown RBP21.15■□□□□ 0.98
SSU72-204ENST00000378726 EIF3CLB5ME19 914 aaKnown RBP21.15■□□□□ 0.98
SSU72-204ENST00000378726 ADORA2AP29274 412 aa21.15■□□□□ 0.98
SSU72-204ENST00000378726 GPS2Q13227 327 aa21.15■□□□□ 0.98
SSU72-204ENST00000378726 ZNF792Q3KQV3 632 aa21.15■□□□□ 0.98
SSU72-204ENST00000378726 HDXQ7Z353 690 aa21.15■□□□□ 0.98
SSU72-204ENST00000378726 GPIHBP1Q8IV16 184 aa21.15■□□□□ 0.98
SSU72-204ENST00000378726 MAP4K3Q8IVH8 894 aa21.15■□□□□ 0.98
SSU72-204ENST00000378726 XXYLT1Q8NBI6 393 aa21.15■□□□□ 0.98
SSU72-204ENST00000378726 TMEM143Q96AN5 459 aa21.15■□□□□ 0.98
SSU72-204ENST00000378726 HVCN1Q96D96 273 aa21.15■□□□□ 0.98
SSU72-204ENST00000378726 EIF3CQ99613 913 aaKnown RBP21.15■□□□□ 0.98
SSU72-204ENST00000378726 GPR20Q99678 358 aa21.15■□□□□ 0.98
SSU72-204ENST00000378726 DHX33Q9H6R0 707 aaKnown RBP21.15■□□□□ 0.98
SSU72-204ENST00000378726 AZI2Q9H6S1 392 aa21.15■□□□□ 0.98
SSU72-204ENST00000378726 PDGFCQ9NRA1 345 aa21.15■□□□□ 0.98
SSU72-204ENST00000378726 HSPBP1Q9NZL4 362 aa21.15■□□□□ 0.98
SSU72-204ENST00000378726 GTPBP10A4D1E9 387 aaKnown RBP21.14■□□□□ 0.98
SSU72-204ENST00000378726 NOP56O00567 594 aaKnown RBP21.14■□□□□ 0.98
SSU72-204ENST00000378726 STRNO43815 780 aa21.14■□□□□ 0.98
SSU72-204ENST00000378726 TXNP10599 105 aaKnown RBP21.14■□□□□ 0.98
SSU72-204ENST00000378726 CNGA1P29973 690 aa21.14■□□□□ 0.98
SSU72-204ENST00000378726 VSNL1P62760 191 aa21.14■□□□□ 0.98
SSU72-204ENST00000378726 SFMBT2Q5VUG0 894 aa21.14■□□□□ 0.98
SSU72-204ENST00000378726 ARMCX2Q7L311 632 aa21.14■□□□□ 0.98
SSU72-204ENST00000378726 SYN2Q92777 582 aaPredicted RBP21.14■□□□□ 0.98
SSU72-204ENST00000378726 L1RE1Q9UN81 338 aa21.14■□□□□ 0.98
SSU72-204ENST00000378726 ANKRD63C9JTQ0 380 aa21.14■□□□□ 0.97
SSU72-204ENST00000378726 TULP2O00295 520 aa21.14■□□□□ 0.97
SSU72-204ENST00000378726 IPO7O95373 1038 aaKnown RBP21.14■□□□□ 0.97
SSU72-204ENST00000378726 EIF4A3P38919 411 aaKnown RBP21.14■□□□□ 0.97
SSU72-204ENST00000378726 BFSP1Q12934 665 aa21.14■□□□□ 0.97
SSU72-204ENST00000378726 WHAMMP3Q1A5X7 153 aa21.14■□□□□ 0.97
SSU72-204ENST00000378726 TMEM63BQ5T3F8 832 aa21.14■□□□□ 0.97
SSU72-204ENST00000378726 KLHDC7AQ5VTJ3 777 aa21.14■□□□□ 0.97
SSU72-204ENST00000378726 SLC7A3Q8WY07 619 aa21.14■□□□□ 0.97
SSU72-204ENST00000378726 GLG1Q92896 1179 aa21.14■□□□□ 0.97
SSU72-204ENST00000378726 COPS5Q92905 334 aa21.14■□□□□ 0.97
SSU72-204ENST00000378726 CEP89Q96ST8 783 aa21.14■□□□□ 0.97
SSU72-204ENST00000378726 TRIM10Q9UDY6 481 aa21.14■□□□□ 0.97
SSU72-204ENST00000378726 KCNG1Q9UIX4 513 aa21.14■□□□□ 0.97
SSU72-204ENST00000378726 IVNS1ABPQ9Y6Y0 642 aa21.14■□□□□ 0.97
SSU72-204ENST00000378726 ZNFX1Q9P2E3 1918 aaKnown RBP21.14■□□□□ 0.97
SSU72-204ENST00000378726 ADGRA3Q8IWK6 1321 aa21.14■□□□□ 0.97
SSU72-204ENST00000378726 CTAGE15A4D2H0 777 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms