RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 ARVCFO00192 962 aa17.35■□□□□ 0.37
CCDC107-204ENST00000378409 ABCD1P33897 745 aa17.35■□□□□ 0.37
CCDC107-204ENST00000378409 HOXD13P35453 343 aa17.35■□□□□ 0.37
CCDC107-204ENST00000378409 PHKA2P46019 1235 aa17.35■□□□□ 0.37
CCDC107-204ENST00000378409 RGS19P49795 217 aa17.35■□□□□ 0.37
CCDC107-204ENST00000378409 MNX1P50219 401 aaPredicted RBP17.35■□□□□ 0.37
CCDC107-204ENST00000378409 GPC3P51654 580 aa17.35■□□□□ 0.37
CCDC107-204ENST00000378409 PMS1P54277 932 aaKnown RBP17.35■□□□□ 0.37
CCDC107-204ENST00000378409 MYL5Q02045 173 aa17.35■□□□□ 0.37
CCDC107-204ENST00000378409 KNOP1Q1ED39 458 aaKnown RBP17.35■□□□□ 0.37
CCDC107-204ENST00000378409 CDCA2Q69YH5 1023 aaPredicted RBP17.35■□□□□ 0.37
CCDC107-204ENST00000378409 CENPPQ6IPU0 288 aa17.35■□□□□ 0.37
CCDC107-204ENST00000378409 LUZP1Q86V48 1076 aa17.35■□□□□ 0.37
CCDC107-204ENST00000378409 SERINC5Q86VE9 423 aa17.35■□□□□ 0.37
CCDC107-204ENST00000378409 DHX40Q8IX18 779 aaKnown RBP17.35■□□□□ 0.37
CCDC107-204ENST00000378409 SYCP3Q8IZU3 236 aa17.35■□□□□ 0.37
CCDC107-204ENST00000378409 ANKLE1Q8NAG6 615 aa17.35■□□□□ 0.37
CCDC107-204ENST00000378409 SLC43A3Q8NBI5 491 aa17.35■□□□□ 0.37
CCDC107-204ENST00000378409 NLRP7Q8WX94 980 aa17.35■□□□□ 0.37
CCDC107-204ENST00000378409 MED15Q96RN5 788 aa17.35■□□□□ 0.37
CCDC107-204ENST00000378409 TSG101Q99816 390 aa17.35■□□□□ 0.37
CCDC107-204ENST00000378409 SENP6Q9GZR1 1112 aaPredicted RBP17.35■□□□□ 0.37
CCDC107-204ENST00000378409 C2orf40Q9H1Z8 148 aa17.35■□□□□ 0.37
CCDC107-204ENST00000378409 TRMT13Q9NUP7 481 aaKnown RBP17.35■□□□□ 0.37
CCDC107-204ENST00000378409 TBX20Q9UMR3 447 aa17.35■□□□□ 0.37
CCDC107-204ENST00000378409 ZMYM2Q9UBW7 1377 aa17.35■□□□□ 0.37
CCDC107-204ENST00000378409 A0A087WZ62 844 aa17.34■□□□□ 0.37
CCDC107-204ENST00000378409 K7ERI5 159 aa17.34■□□□□ 0.37
CCDC107-204ENST00000378409 SCP2P22307 547 aa17.34■□□□□ 0.37
CCDC107-204ENST00000378409 EFNA5P52803 228 aa17.34■□□□□ 0.37
CCDC107-204ENST00000378409 PTENP60484 403 aa17.34■□□□□ 0.37
CCDC107-204ENST00000378409 CDC42EP1Q00587 391 aa17.34■□□□□ 0.37
CCDC107-204ENST00000378409 STRN3Q13033 797 aa17.34■□□□□ 0.37
CCDC107-204ENST00000378409 GSE1Q14687 1217 aa17.34■□□□□ 0.37
CCDC107-204ENST00000378409 IQCB1Q15051 598 aa17.34■□□□□ 0.37
CCDC107-204ENST00000378409 TPD52L1Q16890 204 aaPredicted RBP17.34■□□□□ 0.37
CCDC107-204ENST00000378409 KIZQ2M2Z5 673 aa17.34■□□□□ 0.37
CCDC107-204ENST00000378409 ANKRD40Q6AI12 368 aa17.34■□□□□ 0.37
CCDC107-204ENST00000378409 PHLPP2Q6ZVD8 1323 aa17.34■□□□□ 0.37
CCDC107-204ENST00000378409 TAS1R3Q7RTX0 852 aa17.34■□□□□ 0.37
CCDC107-204ENST00000378409 RSPH3Q86UC2 560 aa17.34■□□□□ 0.37
CCDC107-204ENST00000378409 ZNF410Q86VK4 478 aa17.34■□□□□ 0.37
CCDC107-204ENST00000378409 ENOX1Q8TC92 643 aaKnown RBP17.34■□□□□ 0.37
CCDC107-204ENST00000378409 FDXACB1Q9BRP7 624 aaPredicted RBP17.34■□□□□ 0.37
CCDC107-204ENST00000378409 SEZ6LQ9BYH1 1024 aa17.34■□□□□ 0.37
CCDC107-204ENST00000378409 TRPV6Q9H1D0 765 aa17.34■□□□□ 0.37
CCDC107-204ENST00000378409 IKZF4Q9H2S9 585 aa17.34■□□□□ 0.37
CCDC107-204ENST00000378409 KCTD10Q9H3F6 313 aa17.34■□□□□ 0.37
CCDC107-204ENST00000378409 TMEM206Q9H813 350 aa17.34■□□□□ 0.37
CCDC107-204ENST00000378409 EXOC7Q9UPT5 735 aa17.34■□□□□ 0.37
CCDC107-204ENST00000378409 GINS2Q9Y248 185 aa17.34■□□□□ 0.37
CCDC107-204ENST00000378409 GOLGA6L3A6NEY3 463 aa17.33■□□□□ 0.36
CCDC107-204ENST00000378409 SMTNL1A8MU46 457 aa17.33■□□□□ 0.36
CCDC107-204ENST00000378409 IKBKBO14920 756 aa17.33■□□□□ 0.36
CCDC107-204ENST00000378409 B4GALT4O60513 344 aa17.33■□□□□ 0.36
CCDC107-204ENST00000378409 LRRC63Q05C16 580 aa17.33■□□□□ 0.36
CCDC107-204ENST00000378409 POU5F1BQ06416 359 aa17.33■□□□□ 0.36
CCDC107-204ENST00000378409 TTI2Q6NXR4 508 aa17.33■□□□□ 0.36
CCDC107-204ENST00000378409 MAP4K3Q8IVH8 894 aa17.33■□□□□ 0.36
CCDC107-204ENST00000378409 NME8Q8N427 588 aa17.33■□□□□ 0.36
CCDC107-204ENST00000378409 DIS3LQ8TF46 1054 aaKnown RBP17.33■□□□□ 0.36
CCDC107-204ENST00000378409 WNT8BQ93098 351 aa17.33■□□□□ 0.36
CCDC107-204ENST00000378409 BICD1Q96G01 975 aa17.33■□□□□ 0.36
CCDC107-204ENST00000378409 CTAGE1Q96RT6 745 aa17.33■□□□□ 0.36
CCDC107-204ENST00000378409 NFKBIZQ9BYH8 718 aa17.33■□□□□ 0.36
CCDC107-204ENST00000378409 CCDC113Q9H0I3 377 aa17.33■□□□□ 0.36
CCDC107-204ENST00000378409 GBP3Q9H0R5 595 aa17.33■□□□□ 0.36
CCDC107-204ENST00000378409 TMEM134Q9H6X4 195 aa17.33■□□□□ 0.36
CCDC107-204ENST00000378409 IFT122Q9HBG6 1241 aa17.33■□□□□ 0.36
CCDC107-204ENST00000378409 TYW1Q9NV66 732 aaKnown RBP17.33■□□□□ 0.36
CCDC107-204ENST00000378409 GOLGA6L19H0YKK7 550 aa17.32■□□□□ 0.36
CCDC107-204ENST00000378409 INO80B-WBP1J3KQ70 363 aa17.32■□□□□ 0.36
CCDC107-204ENST00000378409 M0QZ92 97 aa17.32■□□□□ 0.36
CCDC107-204ENST00000378409 PDXKO00764 312 aa17.32■□□□□ 0.36
CCDC107-204ENST00000378409 CALUO43852 315 aaPredicted RBP17.32■□□□□ 0.36
CCDC107-204ENST00000378409 GPR32O75388 356 aa17.32■□□□□ 0.36
CCDC107-204ENST00000378409 RPLP2P05387 115 aaKnown RBP17.32■□□□□ 0.36
CCDC107-204ENST00000378409 ATN1P54259 1190 aaPredicted RBP17.32■□□□□ 0.36
CCDC107-204ENST00000378409 PTK7Q13308 1070 aa17.32■□□□□ 0.36
CCDC107-204ENST00000378409 MAPK6Q16659 721 aa17.32■□□□□ 0.36
CCDC107-204ENST00000378409 SPATA1Q5VX52 437 aa17.32■□□□□ 0.36
CCDC107-204ENST00000378409 HS2ST1Q7LGA3 356 aa17.32■□□□□ 0.36
CCDC107-204ENST00000378409 KCNN1Q92952 543 aa17.32■□□□□ 0.36
CCDC107-204ENST00000378409 OSMRQ99650 979 aa17.32■□□□□ 0.36
CCDC107-204ENST00000378409 DUSP9Q99956 384 aaKnown RBP17.32■□□□□ 0.36
CCDC107-204ENST00000378409 INO80BQ9C086 356 aaPredicted RBP17.32■□□□□ 0.36
CCDC107-204ENST00000378409 ADAMTS10Q9H324 1103 aa17.32■□□□□ 0.36
CCDC107-204ENST00000378409 NFE2L3Q9Y4A8 694 aa17.32■□□□□ 0.36
CCDC107-204ENST00000378409 HNRNPDLO14979 420 aaKnown RBP17.31■□□□□ 0.36
CCDC107-204ENST00000378409 TGFB1I1O43294 461 aa17.31■□□□□ 0.36
CCDC107-204ENST00000378409 CSDE1O75534 798 aaKnown RBP17.31■□□□□ 0.36
CCDC107-204ENST00000378409 PRKCBP05771 671 aa17.31■□□□□ 0.36
CCDC107-204ENST00000378409 CTSHP09668 335 aa17.31■□□□□ 0.36
CCDC107-204ENST00000378409 THPOP40225 353 aa17.31■□□□□ 0.36
CCDC107-204ENST00000378409 CDK7P50613 346 aa17.31■□□□□ 0.36
CCDC107-204ENST00000378409 TPM4P67936 248 aa17.31■□□□□ 0.36
CCDC107-204ENST00000378409 MRPS6P82932 125 aaKnown RBP17.31■□□□□ 0.36
CCDC107-204ENST00000378409 MBTD1Q05BQ5 628 aa17.31■□□□□ 0.36
CCDC107-204ENST00000378409 NCAPHQ15003 741 aa17.31■□□□□ 0.36
CCDC107-204ENST00000378409 ZCWPW2Q504Y3 356 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms