RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 RCOR1Q9UKL0 485 aa22.73■■□□□ 1.23
TRIM13-203ENST00000378183 NLRC5Q86WI3 1866 aa22.73■■□□□ 1.23
TRIM13-203ENST00000378183 A0A087X0B3 334 aa22.72■■□□□ 1.23
TRIM13-203ENST00000378183 NPHP3-ACAD11A0A0J9YXS1 232 aa22.72■■□□□ 1.23
TRIM13-203ENST00000378183 LINC01553A4QN01 128 aa22.72■■□□□ 1.23
TRIM13-203ENST00000378183 LRRIQ4A6NIV6 560 aa22.72■■□□□ 1.23
TRIM13-203ENST00000378183 IBSPP21815 317 aaPredicted RBP22.72■■□□□ 1.23
TRIM13-203ENST00000378183 GUCY2CP25092 1073 aa22.72■■□□□ 1.23
TRIM13-203ENST00000378183 MCM6Q14566 821 aa22.72■■□□□ 1.23
TRIM13-203ENST00000378183 AXDND1Q5T1B0 1012 aaPredicted RBP22.72■■□□□ 1.23
TRIM13-203ENST00000378183 RASSF8Q8NHQ8 419 aa22.72■■□□□ 1.23
TRIM13-203ENST00000378183 CFAP45Q9UL16 551 aa22.72■■□□□ 1.23
TRIM13-203ENST00000378183 PIN4Q9Y237 131 aaKnown RBP22.72■■□□□ 1.23
TRIM13-203ENST00000378183 KIAA1671Q9BY89 1806 aa22.71■■□□□ 1.23
TRIM13-203ENST00000378183 A0A0U1RQF3 1178 aa22.71■■□□□ 1.23
TRIM13-203ENST00000378183 INO80B-WBP1J3KQ70 363 aa22.71■■□□□ 1.23
TRIM13-203ENST00000378183 TSPAN1O60635 241 aa22.71■■□□□ 1.23
TRIM13-203ENST00000378183 CUTAO60888 179 aa22.71■■□□□ 1.23
TRIM13-203ENST00000378183 STAG3L1P0CL83 205 aa22.71■■□□□ 1.23
TRIM13-203ENST00000378183 NAMPTP43490 491 aa22.71■■□□□ 1.23
TRIM13-203ENST00000378183 GATMP50440 423 aa22.71■■□□□ 1.23
TRIM13-203ENST00000378183 RAD51AP2Q09MP3 1159 aa22.71■■□□□ 1.23
TRIM13-203ENST00000378183 NAALADL2Q58DX5 795 aa22.71■■□□□ 1.23
TRIM13-203ENST00000378183 SHC4Q6S5L8 630 aa22.71■■□□□ 1.23
TRIM13-203ENST00000378183 ECHDC2Q86YB7 292 aa22.71■■□□□ 1.23
TRIM13-203ENST00000378183 KCNG4Q8TDN1 519 aa22.71■■□□□ 1.23
TRIM13-203ENST00000378183 TRAIPQ9BWF2 469 aa22.71■■□□□ 1.23
TRIM13-203ENST00000378183 ELAC1Q9H777 363 aaKnown RBP22.71■■□□□ 1.23
TRIM13-203ENST00000378183 CERS4Q9HA82 394 aa22.71■■□□□ 1.23
TRIM13-203ENST00000378183 TMEM161AQ9NX61 479 aa22.71■■□□□ 1.23
TRIM13-203ENST00000378183 CCDC39Q9UFE4 941 aa22.71■■□□□ 1.23
TRIM13-203ENST00000378183 LRFN2Q9ULH4 789 aa22.71■■□□□ 1.23
TRIM13-203ENST00000378183 PCDHA7Q9UN72 937 aa22.71■■□□□ 1.23
TRIM13-203ENST00000378183 PCDHB7Q9Y5E2 793 aa22.71■■□□□ 1.23
TRIM13-203ENST00000378183 MYO9BQ13459 2157 aa22.71■■□□□ 1.23
TRIM13-203ENST00000378183 ADGRA3Q8IWK6 1321 aa22.71■■□□□ 1.23
TRIM13-203ENST00000378183 SFI1A8K8P3 1242 aa22.7■■□□□ 1.22
TRIM13-203ENST00000378183 ATF7P17544 494 aaPredicted RBP22.7■■□□□ 1.22
TRIM13-203ENST00000378183 DHX8Q14562 1220 aaKnown RBP22.7■■□□□ 1.22
TRIM13-203ENST00000378183 UBXN11Q5T124 520 aa22.7■■□□□ 1.22
TRIM13-203ENST00000378183 ZNF598Q86UK7 904 aaKnown RBP22.7■■□□□ 1.22
TRIM13-203ENST00000378183 CDX2Q99626 313 aaPredicted RBP22.7■■□□□ 1.22
TRIM13-203ENST00000378183 KIFC3Q9BVG8 833 aa22.7■■□□□ 1.22
TRIM13-203ENST00000378183 TIPINQ9BVW5 301 aa22.7■■□□□ 1.22
TRIM13-203ENST00000378183 PANK2Q9BZ23 570 aa22.7■■□□□ 1.22
TRIM13-203ENST00000378183 FZD8Q9H461 694 aa22.7■■□□□ 1.22
TRIM13-203ENST00000378183 RNF19AQ9NV58 838 aa22.7■■□□□ 1.22
TRIM13-203ENST00000378183 DACT1Q9NYF0 836 aa22.7■■□□□ 1.22
TRIM13-203ENST00000378183 KCND2Q9NZV8 630 aa22.7■■□□□ 1.22
TRIM13-203ENST00000378183 RALGAPA2Q2PPJ7 1873 aa22.69■■□□□ 1.22
TRIM13-203ENST00000378183 EPOPA6NHQ4 379 aa22.69■■□□□ 1.22
TRIM13-203ENST00000378183 B4GALT5O43286 388 aa22.69■■□□□ 1.22
TRIM13-203ENST00000378183 LINC00271P0C7V0 271 aa22.69■■□□□ 1.22
TRIM13-203ENST00000378183 TXLNAP40222 546 aa22.69■■□□□ 1.22
TRIM13-203ENST00000378183 CACNB1Q02641 598 aaPredicted RBP22.69■■□□□ 1.22
TRIM13-203ENST00000378183 PPP2R5AQ15172 486 aa22.69■■□□□ 1.22
TRIM13-203ENST00000378183 PCBP1Q15365 356 aaKnown RBP eCLIP22.69■■□□□ 1.22
TRIM13-203ENST00000378183 RRAGBQ5VZM2 374 aa22.69■■□□□ 1.22
TRIM13-203ENST00000378183 TWF2Q6IBS0 349 aaKnown RBP22.69■■□□□ 1.22
TRIM13-203ENST00000378183 GPBP1Q86WP2 473 aa22.69■■□□□ 1.22
TRIM13-203ENST00000378183 LARP4BQ92615 738 aaKnown RBP22.69■■□□□ 1.22
TRIM13-203ENST00000378183 CPB2Q96IY4 423 aa22.69■■□□□ 1.22
TRIM13-203ENST00000378183 IFT74Q96LB3 600 aa22.69■■□□□ 1.22
TRIM13-203ENST00000378183 DRC1Q96MC2 740 aa22.69■■□□□ 1.22
TRIM13-203ENST00000378183 CCDC113Q9H0I3 377 aa22.69■■□□□ 1.22
TRIM13-203ENST00000378183 TTLL13PA6NNM8 815 aa22.68■■□□□ 1.22
TRIM13-203ENST00000378183 ERLIN2O94905 339 aa22.68■■□□□ 1.22
TRIM13-203ENST00000378183 EDN1P05305 212 aa22.68■■□□□ 1.22
TRIM13-203ENST00000378183 FGFR1P11362 822 aa22.68■■□□□ 1.22
TRIM13-203ENST00000378183 ARF4P18085 180 aaPredicted RBP22.68■■□□□ 1.22
TRIM13-203ENST00000378183 NPTX2P47972 431 aa22.68■■□□□ 1.22
TRIM13-203ENST00000378183 PEX3P56589 373 aa22.68■■□□□ 1.22
TRIM13-203ENST00000378183 ERVK-21P61565 698 aa22.68■■□□□ 1.22
TRIM13-203ENST00000378183 PPP4R3CPQ6ZMV5 832 aa22.68■■□□□ 1.22
TRIM13-203ENST00000378183 ZBTB8OSQ8IWT0 167 aa22.68■■□□□ 1.22
TRIM13-203ENST00000378183 DEPTORQ8TB45 409 aa22.68■■□□□ 1.22
TRIM13-203ENST00000378183 C2orf40Q9H1Z8 148 aa22.68■■□□□ 1.22
TRIM13-203ENST00000378183 PRDM12Q9H4Q4 367 aa22.68■■□□□ 1.22
TRIM13-203ENST00000378183 FAM105AQ9NUU6 356 aa22.68■■□□□ 1.22
TRIM13-203ENST00000378183 STK17AQ9UEE5 414 aa22.68■■□□□ 1.22
TRIM13-203ENST00000378183 COL4A4P53420 1690 aaPredicted RBP22.68■■□□□ 1.22
TRIM13-203ENST00000378183 AXLP30530 894 aa22.67■■□□□ 1.22
TRIM13-203ENST00000378183 ME1P48163 572 aa22.67■■□□□ 1.22
TRIM13-203ENST00000378183 GIT2Q14161 759 aa22.67■■□□□ 1.22
TRIM13-203ENST00000378183 FAM187BQ17R55 369 aa22.67■■□□□ 1.22
TRIM13-203ENST00000378183 CMTR2Q8IYT2 770 aaKnown RBP22.67■■□□□ 1.22
TRIM13-203ENST00000378183 LEO1Q8WVC0 666 aaPredicted RBP22.67■■□□□ 1.22
TRIM13-203ENST00000378183 MYLIPQ8WY64 445 aa22.67■■□□□ 1.22
TRIM13-203ENST00000378183 REEP2Q9BRK0 252 aa22.67■■□□□ 1.22
TRIM13-203ENST00000378183 C17orf80Q9BSJ5 609 aa22.67■■□□□ 1.22
TRIM13-203ENST00000378183 RNF216Q9NWF9 866 aaPredicted RBP22.67■■□□□ 1.22
TRIM13-203ENST00000378183 CCDC169A6NNP5 214 aa22.66■■□□□ 1.22
TRIM13-203ENST00000378183 RFXAPO00287 272 aa22.66■■□□□ 1.22
TRIM13-203ENST00000378183 ZNF623O75123 536 aa22.66■■□□□ 1.22
TRIM13-203ENST00000378183 EOMESO95936 686 aa22.66■■□□□ 1.22
TRIM13-203ENST00000378183 KRT85P78386 507 aa22.66■■□□□ 1.22
TRIM13-203ENST00000378183 NUCB2P80303 420 aa22.66■■□□□ 1.22
TRIM13-203ENST00000378183 BTG3Q14201 252 aaPredicted RBP22.66■■□□□ 1.22
TRIM13-203ENST00000378183 PAN2Q504Q3 1202 aaKnown RBP22.66■■□□□ 1.22
TRIM13-203ENST00000378183 CCDC73Q6ZRK6 1079 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms