RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 PHC3Q8NDX5 983 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 OTUD7AQ8TE49 926 aaPredicted RBP5.27□□□□□ -1.57
PCDH9-201ENST00000377861 ADAMTS13Q76LX8 1427 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 RASA4BC9J798 803 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 RASA4O43374 803 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 ARHGDIAP52565 204 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 COG7P83436 770 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 TNFAIP2Q03169 654 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 MORF4L2Q15014 288 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 USP33Q8TEY7 942 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 PRR12Q9ULL5 1215 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 H3BNX3 289 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 TNNC2P02585 160 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 CPA3P15088 417 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 AAGABQ6PD74 315 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.27□□□□□ -1.57
PCDH9-201ENST00000377861 ASNSD1Q9NWL6 643 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 SQORQ9Y6N5 450 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 NPR1P16066 1061 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 ARCQ7LC44 396 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 POLNQ7Z5Q5 900 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 THNSL1Q8IYQ7 743 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 PRR29P0C7W0 189 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 ARMCX5Q6P1M9 558 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 KYAT3Q6YP21 454 aaKnown RBP5.27□□□□□ -1.57
PCDH9-201ENST00000377861 ENOPH1Q9UHY7 261 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 FLT1P17948 1338 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 M0R3G1 203 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 EIF4A3P38919 411 aaKnown RBP5.27□□□□□ -1.57
PCDH9-201ENST00000377861 AFG1LQ8WV93 481 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 USP13Q92995 863 aaPredicted RBP5.27□□□□□ -1.57
PCDH9-201ENST00000377861 MED15Q96RN5 788 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 CAPN7Q9Y6W3 813 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 PMS2P54278 862 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 PTENP60484 403 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 ACTN3Q08043 901 aaPredicted RBP5.27□□□□□ -1.57
PCDH9-201ENST00000377861 TMPRSS6Q8IU80 811 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 ENAHQ8N8S7 591 aaPredicted RBP5.27□□□□□ -1.57
PCDH9-201ENST00000377861 ANKFY1Q9P2R3 1169 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 UCHL3P15374 230 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 Q4G0T1 1027 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 LINC00523Q86TU6 105 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 PIK3R5Q8WYR1 880 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 RSAD1Q9HA92 442 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 MAP3K13O43283 966 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 VPS4BO75351 444 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 CYP19A1P11511 503 aaPredicted RBP5.27□□□□□ -1.57
PCDH9-201ENST00000377861 FCGR1AP12314 374 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 HYIQ5T013 277 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 TRPM8Q7Z2W7 1104 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 CCDC117Q8IWD4 279 aaPredicted RBP5.27□□□□□ -1.57
PCDH9-201ENST00000377861 TATDN1Q6P1N9 297 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 SNF8Q96H20 258 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 GPBP1L1Q9HC44 474 aaPredicted RBP5.27□□□□□ -1.57
PCDH9-201ENST00000377861 SAMSN1Q9NSI8 373 aaKnown RBP5.27□□□□□ -1.57
PCDH9-201ENST00000377861 STK39Q9UEW8 545 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 SLC2A3P11169 496 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 MIGA1Q8NAN2 632 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 HESX1Q9UBX0 185 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 NFU1Q9UMS0 254 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 PACSIN2Q9UNF0 486 aaPredicted RBP5.27□□□□□ -1.57
PCDH9-201ENST00000377861 SAMM50Q9Y512 469 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 GPR75-ASB3A0A0A6YYF3 556 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 BFSP1Q12934 665 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 MAPK7Q13164 816 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 LACTB2Q53H82 288 aaPredicted RBP5.27□□□□□ -1.57
PCDH9-201ENST00000377861 KCNK16Q96T55 309 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 HGSO14964 777 aaPredicted RBP5.26□□□□□ -1.57
PCDH9-201ENST00000377861 OAZ1P54368 228 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 CEP55Q53EZ4 464 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 TRIM65Q6PJ69 517 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 CTTNBP2Q8WZ74 1663 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 KPNA7A9QM74 516 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 FAM196AQ6ZSG2 479 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 ST14Q9Y5Y6 855 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 CDY2AQ9Y6F7 541 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 CDY1Q9Y6F8 540 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 SMIM31A0A1B0GVY4 71 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 MAGEA13PA6NCF6 341 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 ATICP31939 592 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 MAGEB10Q96LZ2 347 aaPredicted RBP5.26□□□□□ -1.57
PCDH9-201ENST00000377861 RMDN2Q96LZ7 410 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 TRMOQ9BU70 441 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 LOC102724428A0A0B4J2F2 783 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 SIK1P57059 783 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 PURAQ00577 322 aaKnown RBP5.26□□□□□ -1.57
PCDH9-201ENST00000377861 LINC00299Q6ZSB3 139 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 TRAPPC3O43617 180 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 GGCXP38435 758 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 NTRK3Q16288 839 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 TEKT3Q9BXF9 490 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 TOPORSQ9NS56 1045 aaPredicted RBP5.26□□□□□ -1.57
PCDH9-201ENST00000377861 BLOC1S6Q9UL45 172 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 TPX2Q9ULW0 747 aaKnown RBP5.26□□□□□ -1.57
PCDH9-201ENST00000377861 ADGRA3Q8IWK6 1321 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 IL18RAPO95256 599 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 KRT14P02533 472 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 CES1P23141 567 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 NLRP14Q86W24 1093 aa5.26□□□□□ -1.57
PCDH9-201ENST00000377861 TDRPQ86YL5 185 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms