RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 UBE4BO95155 1302 aa14.24□□□□□ -0.13
CBWD3-203ENST00000377344 BICDL2A1A5D9 508 aa14.24□□□□□ -0.13
CBWD3-203ENST00000377344 INO80B-WBP1J3KQ70 363 aa14.24□□□□□ -0.13
CBWD3-203ENST00000377344 PHKA2P46019 1235 aa14.24□□□□□ -0.13
CBWD3-203ENST00000377344 GPC3P51654 580 aa14.24□□□□□ -0.13
CBWD3-203ENST00000377344 KNOP1Q1ED39 458 aaKnown RBP14.24□□□□□ -0.13
CBWD3-203ENST00000377344 SERINC5Q86VE9 423 aa14.24□□□□□ -0.13
CBWD3-203ENST00000377344 TSG101Q99816 390 aa14.24□□□□□ -0.13
CBWD3-203ENST00000377344 BPIFA3Q9BQP9 254 aa14.24□□□□□ -0.13
CBWD3-203ENST00000377344 STRA6Q9BX79 667 aa14.24□□□□□ -0.13
CBWD3-203ENST00000377344 INO80BQ9C086 356 aaPredicted RBP14.24□□□□□ -0.13
CBWD3-203ENST00000377344 TRPV6Q9H1D0 765 aa14.24□□□□□ -0.13
CBWD3-203ENST00000377344 RBSNQ9H1K0 784 aa14.24□□□□□ -0.13
CBWD3-203ENST00000377344 C2orf40Q9H1Z8 148 aa14.24□□□□□ -0.13
CBWD3-203ENST00000377344 SEMA6BQ9H3T3 888 aa14.24□□□□□ -0.13
CBWD3-203ENST00000377344 M0QZ92 97 aa14.23□□□□□ -0.13
CBWD3-203ENST00000377344 PPP1R37O75864 691 aa14.23□□□□□ -0.13
CBWD3-203ENST00000377344 CCNE1P24864 410 aa14.23□□□□□ -0.13
CBWD3-203ENST00000377344 ABCD1P33897 745 aa14.23□□□□□ -0.13
CBWD3-203ENST00000377344 HOXD13P35453 343 aa14.23□□□□□ -0.13
CBWD3-203ENST00000377344 MNX1P50219 401 aaPredicted RBP14.23□□□□□ -0.13
CBWD3-203ENST00000377344 EFNA5P52803 228 aa14.23□□□□□ -0.13
CBWD3-203ENST00000377344 PMS1P54277 932 aaKnown RBP14.23□□□□□ -0.13
CBWD3-203ENST00000377344 CDC42EP1Q00587 391 aa14.23□□□□□ -0.13
CBWD3-203ENST00000377344 MYL5Q02045 173 aa14.23□□□□□ -0.13
CBWD3-203ENST00000377344 BMT2Q1RMZ1 405 aa14.23□□□□□ -0.13
CBWD3-203ENST00000377344 ANKRD40Q6AI12 368 aa14.23□□□□□ -0.13
CBWD3-203ENST00000377344 NME8Q8N427 588 aa14.23□□□□□ -0.13
CBWD3-203ENST00000377344 ANKLE1Q8NAG6 615 aa14.23□□□□□ -0.13
CBWD3-203ENST00000377344 SLC43A3Q8NBI5 491 aa14.23□□□□□ -0.13
CBWD3-203ENST00000377344 BICD1Q96G01 975 aa14.23□□□□□ -0.13
CBWD3-203ENST00000377344 IKZF4Q9H2S9 585 aa14.23□□□□□ -0.13
CBWD3-203ENST00000377344 TMEM206Q9H813 350 aa14.23□□□□□ -0.13
CBWD3-203ENST00000377344 IFT122Q9HBG6 1241 aa14.23□□□□□ -0.13
CBWD3-203ENST00000377344 EXOC7Q9UPT5 735 aa14.23□□□□□ -0.13
CBWD3-203ENST00000377344 PHLPP2Q6ZVD8 1323 aa14.23□□□□□ -0.13
CBWD3-203ENST00000377344 SMTNL1A8MU46 457 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 GOLGA6L19H0YKK7 550 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 B4GALT4O60513 344 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 CSDE1O75534 798 aaKnown RBP14.22□□□□□ -0.13
CBWD3-203ENST00000377344 THPOP40225 353 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 PTENP60484 403 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 PTK7Q13308 1070 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 GSE1Q14687 1217 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 MAPK6Q16659 721 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 CDCA2Q69YH5 1023 aaPredicted RBP14.22□□□□□ -0.13
CBWD3-203ENST00000377344 CENPPQ6IPU0 288 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 ZNF410Q86VK4 478 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 DHX40Q8IX18 779 aaKnown RBP14.22□□□□□ -0.13
CBWD3-203ENST00000377344 WNT8BQ93098 351 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 HVCN1Q96D96 273 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 CTAGE1Q96RT6 745 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 OSMRQ99650 979 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 SEZ6LQ9BYH1 1024 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 KCTD10Q9H3F6 313 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 GOLGA6L3A6NEY3 463 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 PQBP1O60828 265 aaKnown RBP14.22□□□□□ -0.13
CBWD3-203ENST00000377344 GPR32O75388 356 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 CTSHP09668 335 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 SCP2P22307 547 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 IQCB1Q15051 598 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 TMEM132AQ24JP5 1023 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 HS2ST1Q7LGA3 356 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 TAS1R3Q7RTX0 852 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 MAP4K3Q8IVH8 894 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 ENOX1Q8TC92 643 aaKnown RBP14.22□□□□□ -0.13
CBWD3-203ENST00000377344 EEF2KMTQ96G04 330 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 PAWRQ96IZ0 340 aaKnown RBP14.22□□□□□ -0.13
CBWD3-203ENST00000377344 MED15Q96RN5 788 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 GCOM2Q9BZD3 368 aaPredicted RBP14.22□□□□□ -0.13
CBWD3-203ENST00000377344 GBP3Q9H0R5 595 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 ADAMTS10Q9H324 1103 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 TMEM134Q9H6X4 195 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 TYW1Q9NV66 732 aaKnown RBP14.22□□□□□ -0.13
CBWD3-203ENST00000377344 USP20Q9Y2K6 914 aa14.22□□□□□ -0.13
CBWD3-203ENST00000377344 ZMYM2Q9UBW7 1377 aa14.21□□□□□ -0.13
CBWD3-203ENST00000377344 HNRNPDLO14979 420 aaKnown RBP14.21□□□□□ -0.13
CBWD3-203ENST00000377344 CLIC2O15247 247 aa14.21□□□□□ -0.13
CBWD3-203ENST00000377344 CALUO43852 315 aaPredicted RBP14.21□□□□□ -0.13
CBWD3-203ENST00000377344 PRKCBP05771 671 aa14.21□□□□□ -0.13
CBWD3-203ENST00000377344 CDK7P50613 346 aa14.21□□□□□ -0.13
CBWD3-203ENST00000377344 MRPS6P82932 125 aaKnown RBP14.21□□□□□ -0.13
CBWD3-203ENST00000377344 LRRC63Q05C16 580 aa14.21□□□□□ -0.13
CBWD3-203ENST00000377344 POU5F1BQ06416 359 aa14.21□□□□□ -0.13
CBWD3-203ENST00000377344 HSP90AA4PQ58FG1 418 aa14.21□□□□□ -0.13
CBWD3-203ENST00000377344 SPATA1Q5VX52 437 aa14.21□□□□□ -0.13
CBWD3-203ENST00000377344 SLC39A5Q6ZMH5 540 aa14.21□□□□□ -0.13
CBWD3-203ENST00000377344 CSGALNACT2Q8N6G5 542 aa14.21□□□□□ -0.13
CBWD3-203ENST00000377344 NFKBIZQ9BYH8 718 aa14.21□□□□□ -0.13
CBWD3-203ENST00000377344 C11orf49Q9H6J7 331 aa14.21□□□□□ -0.13
CBWD3-203ENST00000377344 MINDY3Q9H8M7 445 aa14.21□□□□□ -0.13
CBWD3-203ENST00000377344 CDHR5Q9HBB8 845 aa14.21□□□□□ -0.13
CBWD3-203ENST00000377344 NFE2L3Q9Y4A8 694 aa14.21□□□□□ -0.13
CBWD3-203ENST00000377344 MROH7Q68CQ1 1323 aa14.21□□□□□ -0.14
CBWD3-203ENST00000377344 PDXKO00764 312 aa14.2□□□□□ -0.14
CBWD3-203ENST00000377344 IKBKBO14920 756 aa14.2□□□□□ -0.14
CBWD3-203ENST00000377344 RPLP2P05387 115 aaKnown RBP14.2□□□□□ -0.14
CBWD3-203ENST00000377344 LIG4P49917 911 aa14.2□□□□□ -0.14
CBWD3-203ENST00000377344 TPM4P67936 248 aa14.2□□□□□ -0.14
CBWD3-203ENST00000377344 MBTD1Q05BQ5 628 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms