RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 LONRF3Q496Y0 759 aa23.52■■□□□ 1.36
VSX1-201ENST00000376707 GLB1LQ6UWU2 654 aa23.52■■□□□ 1.36
VSX1-201ENST00000376707 RNF135Q8IUD6 432 aa23.52■■□□□ 1.36
VSX1-201ENST00000376707 SLC39A11Q8N1S5 342 aa23.52■■□□□ 1.36
VSX1-201ENST00000376707 PRPF31Q8WWY3 499 aaKnown RBP23.52■■□□□ 1.36
VSX1-201ENST00000376707 TMEM143Q96AN5 459 aa23.52■■□□□ 1.36
VSX1-201ENST00000376707 DYDC2Q96IM9 177 aa23.52■■□□□ 1.36
VSX1-201ENST00000376707 ZSWIM4Q9H7M6 989 aa23.52■■□□□ 1.36
VSX1-201ENST00000376707 IFT122Q9HBG6 1241 aa23.52■■□□□ 1.36
VSX1-201ENST00000376707 BMP2KQ9NSY1 1161 aaPredicted RBP23.52■■□□□ 1.36
VSX1-201ENST00000376707 FAM105AQ9NUU6 356 aa23.52■■□□□ 1.36
VSX1-201ENST00000376707 HIDE1A8MVS5 230 aa23.51■■□□□ 1.35
VSX1-201ENST00000376707 SRGAP2CP0DJJ0 459 aa23.51■■□□□ 1.35
VSX1-201ENST00000376707 BCAR1P56945 870 aa23.51■■□□□ 1.35
VSX1-201ENST00000376707 CYP4A11Q02928 519 aa23.51■■□□□ 1.35
VSX1-201ENST00000376707 TRIM29Q14134 588 aa23.51■■□□□ 1.35
VSX1-201ENST00000376707 XKR9Q5GH70 373 aa23.51■■□□□ 1.35
VSX1-201ENST00000376707 TNFRSF25Q93038 417 aa23.51■■□□□ 1.35
VSX1-201ENST00000376707 LPPQ93052 612 aa23.51■■□□□ 1.35
VSX1-201ENST00000376707 MUTYHQ9UIF7 546 aa23.51■■□□□ 1.35
VSX1-201ENST00000376707 NT5C1B-RDH14C9J2C7 533 aa23.5■■□□□ 1.35
VSX1-201ENST00000376707 GAS2O43903 313 aaKnown RBP23.5■■□□□ 1.35
VSX1-201ENST00000376707 ZC3H11AO75152 810 aaKnown RBP eCLIP23.5■■□□□ 1.35
VSX1-201ENST00000376707 TECP42680 631 aa23.5■■□□□ 1.35
VSX1-201ENST00000376707 SPIRE1Q08AE8 756 aa23.5■■□□□ 1.35
VSX1-201ENST00000376707 LAMTOR4Q0VGL1 99 aa23.5■■□□□ 1.35
VSX1-201ENST00000376707 CTTNQ14247 550 aaKnown RBP23.5■■□□□ 1.35
VSX1-201ENST00000376707 SMC1AQ14683 1233 aaKnown RBP23.5■■□□□ 1.35
VSX1-201ENST00000376707 EMC2Q15006 297 aa23.5■■□□□ 1.35
VSX1-201ENST00000376707 LLGL2Q6P1M3 1020 aa23.5■■□□□ 1.35
VSX1-201ENST00000376707 SRGAP1Q7Z6B7 1085 aa23.5■■□□□ 1.35
VSX1-201ENST00000376707 NSUN7Q8NE18 718 aaKnown RBP23.5■■□□□ 1.35
VSX1-201ENST00000376707 TCP11Q8WWU5 503 aa23.5■■□□□ 1.35
VSX1-201ENST00000376707 TMEM169Q96HH4 297 aa23.5■■□□□ 1.35
VSX1-201ENST00000376707 AGPAT5Q9NUQ2 364 aa23.5■■□□□ 1.35
VSX1-201ENST00000376707 INPP5FQ9Y2H2 1132 aa23.5■■□□□ 1.35
VSX1-201ENST00000376707 ZNF623O75123 536 aa23.49■■□□□ 1.35
VSX1-201ENST00000376707 CA8P35219 290 aa23.49■■□□□ 1.35
VSX1-201ENST00000376707 FOSBP53539 338 aa23.49■■□□□ 1.35
VSX1-201ENST00000376707 BMS1Q14692 1282 aaKnown RBP23.49■■□□□ 1.35
VSX1-201ENST00000376707 CALCRLQ16602 461 aa23.49■■□□□ 1.35
VSX1-201ENST00000376707 HERC4Q5GLZ8 1057 aaPredicted RBP23.49■■□□□ 1.35
VSX1-201ENST00000376707 NOMO2Q5JPE7 1267 aa23.49■■□□□ 1.35
VSX1-201ENST00000376707 TMEM184AQ6ZMB5 413 aa23.49■■□□□ 1.35
VSX1-201ENST00000376707 TPH2Q8IWU9 490 aa23.49■■□□□ 1.35
VSX1-201ENST00000376707 PGBD4Q96DM1 585 aa23.49■■□□□ 1.35
VSX1-201ENST00000376707 PHF7Q9BWX1 381 aaPredicted RBP23.49■■□□□ 1.35
VSX1-201ENST00000376707 PCDHA12Q9UN75 941 aa23.49■■□□□ 1.35
VSX1-201ENST00000376707 CARNS1A5YM72 827 aa23.48■■□□□ 1.35
VSX1-201ENST00000376707 BTBD18B2RXH4 712 aa23.48■■□□□ 1.35
VSX1-201ENST00000376707 ASAP2O43150 1006 aa23.48■■□□□ 1.35
VSX1-201ENST00000376707 JAK2O60674 1132 aa23.48■■□□□ 1.35
VSX1-201ENST00000376707 RNASELQ05823 741 aaKnown RBP23.48■■□□□ 1.35
VSX1-201ENST00000376707 KCNC3Q14003 757 aa23.48■■□□□ 1.35
VSX1-201ENST00000376707 ANKRD54Q6NXT1 300 aa23.48■■□□□ 1.35
VSX1-201ENST00000376707 DIS3L2Q8IYB7 885 aaKnown RBP23.48■■□□□ 1.35
VSX1-201ENST00000376707 MRPL43Q8N983 215 aaKnown RBP23.48■■□□□ 1.35
VSX1-201ENST00000376707 EIF2AK1Q9BQI3 630 aaKnown RBP23.48■■□□□ 1.35
VSX1-201ENST00000376707 TBC1D13Q9NVG8 400 aa23.48■■□□□ 1.35
VSX1-201ENST00000376707 PCDHB2Q9Y5E7 798 aa23.48■■□□□ 1.35
VSX1-201ENST00000376707 MEIS3P2A8K0S8 358 aa23.47■■□□□ 1.35
VSX1-201ENST00000376707 LOC730098B7Z3J9 87 aa23.47■■□□□ 1.35
VSX1-201ENST00000376707 ZBTB39O15060 712 aa23.47■■□□□ 1.35
VSX1-201ENST00000376707 SLITRK3O94933 977 aa23.47■■□□□ 1.35
VSX1-201ENST00000376707 FERMT3Q86UX7 667 aa23.47■■□□□ 1.35
VSX1-201ENST00000376707 RNF149Q8NC42 400 aa23.47■■□□□ 1.35
VSX1-201ENST00000376707 SUSD6Q92537 303 aa23.47■■□□□ 1.35
VSX1-201ENST00000376707 RPGRIP1Q96KN7 1286 aa23.47■■□□□ 1.35
VSX1-201ENST00000376707 MTRQ99707 1265 aa23.47■■□□□ 1.35
VSX1-201ENST00000376707 MINDY3Q9H8M7 445 aa23.47■■□□□ 1.35
VSX1-201ENST00000376707 C2orf71A6NGG8 1288 aa23.46■■□□□ 1.35
VSX1-201ENST00000376707 NEMFO60524 1076 aa23.46■■□□□ 1.35
VSX1-201ENST00000376707 OFD1O75665 1012 aa23.46■■□□□ 1.35
VSX1-201ENST00000376707 ST3GAL1Q11201 340 aa23.46■■□□□ 1.35
VSX1-201ENST00000376707 URGCPQ8TCY9 931 aa23.46■■□□□ 1.35
VSX1-201ENST00000376707 CASP10Q92851 521 aa23.46■■□□□ 1.35
VSX1-201ENST00000376707 CCDC43Q96MW1 224 aaKnown RBP23.46■■□□□ 1.35
VSX1-201ENST00000376707 APOL5Q9BWW9 433 aa23.46■■□□□ 1.35
VSX1-201ENST00000376707 GBP3Q9H0R5 595 aa23.46■■□□□ 1.35
VSX1-201ENST00000376707 NRDE2Q9H7Z3 1164 aa23.46■■□□□ 1.35
VSX1-201ENST00000376707 TTC12Q9H892 705 aaPredicted RBP23.46■■□□□ 1.35
VSX1-201ENST00000376707 ERLIN2O94905 339 aa23.45■■□□□ 1.34
VSX1-201ENST00000376707 CXCL14O95715 111 aa23.45■■□□□ 1.34
VSX1-201ENST00000376707 HOXB8P17481 243 aaPredicted RBP23.45■■□□□ 1.34
VSX1-201ENST00000376707 TXKP42681 527 aa23.45■■□□□ 1.34
VSX1-201ENST00000376707 CBX2Q14781 532 aaPredicted RBP23.45■■□□□ 1.34
VSX1-201ENST00000376707 SYCE2Q6PIF2 218 aa23.45■■□□□ 1.34
VSX1-201ENST00000376707 VPS52Q8N1B4 723 aa23.45■■□□□ 1.34
VSX1-201ENST00000376707 TMEM87AQ8NBN3 555 aa23.45■■□□□ 1.34
VSX1-201ENST00000376707 S1PR5Q9H228 398 aa23.45■■□□□ 1.34
VSX1-201ENST00000376707 HCFC2Q9Y5Z7 792 aa23.45■■□□□ 1.34
VSX1-201ENST00000376707 LYPLA2O95372 231 aa23.44■■□□□ 1.34
VSX1-201ENST00000376707 GALTP07902 379 aa23.44■■□□□ 1.34
VSX1-201ENST00000376707 HOXA11P31270 313 aaPredicted RBP23.44■■□□□ 1.34
VSX1-201ENST00000376707 MXD4Q14582 209 aaPredicted RBP23.44■■□□□ 1.34
VSX1-201ENST00000376707 C8orf34Q49A92 452 aa23.44■■□□□ 1.34
VSX1-201ENST00000376707 TPRNQ4KMQ1 711 aa23.44■■□□□ 1.34
VSX1-201ENST00000376707 AGMOQ6ZNB7 445 aa23.44■■□□□ 1.34
VSX1-201ENST00000376707 MRPL10Q7Z7H8 261 aaKnown RBP23.44■■□□□ 1.34
VSX1-201ENST00000376707 TMEM173Q86WV6 379 aaPredicted RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms