RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 KCNN1Q92952 543 aa11.5□□□□□ -0.57
PDPN-203ENST00000376061 EEF2KMTQ96G04 330 aa11.5□□□□□ -0.57
PDPN-203ENST00000376061 ACCSQ96QU6 501 aa11.5□□□□□ -0.57
PDPN-203ENST00000376061 MTG1Q9BT17 334 aaPredicted RBP11.5□□□□□ -0.57
PDPN-203ENST00000376061 TRIM5Q9C035 493 aa11.5□□□□□ -0.57
PDPN-203ENST00000376061 SUGCTQ9HAC7 445 aa11.5□□□□□ -0.57
PDPN-203ENST00000376061 SETD4Q9NVD3 440 aa11.5□□□□□ -0.57
PDPN-203ENST00000376061 IFNKQ9P0W0 207 aa11.5□□□□□ -0.57
PDPN-203ENST00000376061 SUCLA2Q9P2R7 463 aaPredicted RBP11.5□□□□□ -0.57
PDPN-203ENST00000376061 PTPN22Q9Y2R2 807 aa11.5□□□□□ -0.57
PDPN-203ENST00000376061 PHLPP2Q6ZVD8 1323 aa11.49□□□□□ -0.57
PDPN-203ENST00000376061 NRCAMQ92823 1304 aa11.49□□□□□ -0.57
PDPN-203ENST00000376061 RRN3P2A6NIE6 340 aa11.49□□□□□ -0.57
PDPN-203ENST00000376061 H0YCG3 227 aa11.49□□□□□ -0.57
PDPN-203ENST00000376061 CALUO43852 315 aaPredicted RBP11.49□□□□□ -0.57
PDPN-203ENST00000376061 NR3C1P04150 777 aa11.49□□□□□ -0.57
PDPN-203ENST00000376061 GJB1P08034 283 aa11.49□□□□□ -0.57
PDPN-203ENST00000376061 SCP2P22307 547 aa11.49□□□□□ -0.57
PDPN-203ENST00000376061 EEF1GP26641 437 aaKnown RBP11.49□□□□□ -0.57
PDPN-203ENST00000376061 HOXC8P31273 242 aa11.49□□□□□ -0.57
PDPN-203ENST00000376061 FKBP3Q00688 224 aaKnown RBP11.49□□□□□ -0.57
PDPN-203ENST00000376061 SPAG1Q07617 926 aa11.49□□□□□ -0.57
PDPN-203ENST00000376061 LAMTOR4Q0VGL1 99 aa11.49□□□□□ -0.57
PDPN-203ENST00000376061 HIC1Q14526 733 aa11.49□□□□□ -0.57
PDPN-203ENST00000376061 MXD4Q14582 209 aaPredicted RBP11.49□□□□□ -0.57
PDPN-203ENST00000376061 KRT31Q15323 416 aa11.49□□□□□ -0.57
PDPN-203ENST00000376061 NFIL3Q16649 462 aa11.49□□□□□ -0.57
PDPN-203ENST00000376061 TCP11X2Q5H9J9 407 aa11.49□□□□□ -0.57
PDPN-203ENST00000376061 CDCA2Q69YH5 1023 aaPredicted RBP11.49□□□□□ -0.57
PDPN-203ENST00000376061 CCSAPQ6IQ19 270 aaPredicted RBP11.49□□□□□ -0.57
PDPN-203ENST00000376061 CXCL17Q6UXB2 119 aa11.49□□□□□ -0.57
PDPN-203ENST00000376061 HS2ST1Q7LGA3 356 aa11.49□□□□□ -0.57
PDPN-203ENST00000376061 TAS1R3Q7RTX0 852 aa11.49□□□□□ -0.57
PDPN-203ENST00000376061 FAM114A1Q8IWE2 563 aa11.49□□□□□ -0.57
PDPN-203ENST00000376061 METTL13Q8N6R0 699 aa11.49□□□□□ -0.57
PDPN-203ENST00000376061 DEPTORQ8TB45 409 aa11.49□□□□□ -0.57
PDPN-203ENST00000376061 PDLIM2Q96JY6 352 aa11.49□□□□□ -0.57
PDPN-203ENST00000376061 CNOT6LQ96LI5 555 aaKnown RBP11.49□□□□□ -0.57
PDPN-203ENST00000376061 CEP63Q96MT8 703 aa11.49□□□□□ -0.57
PDPN-203ENST00000376061 XPO4Q9C0E2 1151 aaKnown RBP11.49□□□□□ -0.57
PDPN-203ENST00000376061 GBP3Q9H0R5 595 aa11.49□□□□□ -0.57
PDPN-203ENST00000376061 TMEM206Q9H813 350 aa11.49□□□□□ -0.57
PDPN-203ENST00000376061 HMX1Q9NP08 348 aaPredicted RBP11.49□□□□□ -0.57
PDPN-203ENST00000376061 AGPAT3Q9NRZ7 376 aa11.49□□□□□ -0.57
PDPN-203ENST00000376061 INTS13Q9NVM9 706 aa11.49□□□□□ -0.57
PDPN-203ENST00000376061 LIMA1Q9UHB6 759 aaKnown RBP11.49□□□□□ -0.57
PDPN-203ENST00000376061 TBX20Q9UMR3 447 aa11.49□□□□□ -0.57
PDPN-203ENST00000376061 MBLAC1A4D2B0 266 aaPredicted RBP11.48□□□□□ -0.57
PDPN-203ENST00000376061 TISP43B9A030 160 aa11.48□□□□□ -0.57
PDPN-203ENST00000376061 ZEB2O60315 1214 aa11.48□□□□□ -0.57
PDPN-203ENST00000376061 MSCO60682 206 aa11.48□□□□□ -0.57
PDPN-203ENST00000376061 FGFR1OPO95684 399 aaKnown RBP11.48□□□□□ -0.57
PDPN-203ENST00000376061 SERPINC1P01008 464 aa11.48□□□□□ -0.57
PDPN-203ENST00000376061 CDK11BP21127 795 aaKnown RBP11.48□□□□□ -0.57
PDPN-203ENST00000376061 NR2F2P24468 414 aa11.48□□□□□ -0.57
PDPN-203ENST00000376061 ABCD1P33897 745 aa11.48□□□□□ -0.57
PDPN-203ENST00000376061 DNM2P50570 870 aa11.48□□□□□ -0.57
PDPN-203ENST00000376061 ADAM17P78536 824 aa11.48□□□□□ -0.57
PDPN-203ENST00000376061 CCDC173Q0VFZ6 552 aa11.48□□□□□ -0.57
PDPN-203ENST00000376061 IER5LQ5T953 404 aa11.48□□□□□ -0.57
PDPN-203ENST00000376061 NFRKBQ6P4R8 1299 aa11.48□□□□□ -0.57
PDPN-203ENST00000376061 RHPN2Q8IUC4 686 aa11.48□□□□□ -0.57
PDPN-203ENST00000376061 SYCP3Q8IZU3 236 aa11.48□□□□□ -0.57
PDPN-203ENST00000376061 GOLGA5Q8TBA6 731 aa11.48□□□□□ -0.57
PDPN-203ENST00000376061 MRFAP1L1Q96HT8 127 aa11.48□□□□□ -0.57
PDPN-203ENST00000376061 PPP1R9BQ96SB3 815 aa11.48□□□□□ -0.57
PDPN-203ENST00000376061 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.48□□□□□ -0.57
PDPN-203ENST00000376061 TAB2Q9NYJ8 693 aa11.48□□□□□ -0.57
PDPN-203ENST00000376061 MAGEC2Q9UBF1 373 aaPredicted RBP11.48□□□□□ -0.57
PDPN-203ENST00000376061 KCNG1Q9UIX4 513 aa11.48□□□□□ -0.57
PDPN-203ENST00000376061 CLIC2O15247 247 aa11.47□□□□□ -0.57
PDPN-203ENST00000376061 EDN1P05305 212 aa11.47□□□□□ -0.57
PDPN-203ENST00000376061 ASGR1P07306 291 aa11.47□□□□□ -0.57
PDPN-203ENST00000376061 HSPA8P11142 646 aaKnown RBP11.47□□□□□ -0.57
PDPN-203ENST00000376061 CDC25BP30305 580 aa11.47□□□□□ -0.57
PDPN-203ENST00000376061 TFDP1Q14186 410 aa11.47□□□□□ -0.57
PDPN-203ENST00000376061 KCNA10Q16322 511 aa11.47□□□□□ -0.57
PDPN-203ENST00000376061 SLC39A4Q6P5W5 647 aa11.47□□□□□ -0.57
PDPN-203ENST00000376061 RUFY4Q6ZNE9 571 aa11.47□□□□□ -0.57
PDPN-203ENST00000376061 C12orf56Q8IXR9 622 aa11.47□□□□□ -0.57
PDPN-203ENST00000376061 PCSK9Q8NBP7 692 aaKnown RBP11.47□□□□□ -0.57
PDPN-203ENST00000376061 RNF149Q8NC42 400 aa11.47□□□□□ -0.57
PDPN-203ENST00000376061 ANKRD20A12PQ8NF67 263 aa11.47□□□□□ -0.57
PDPN-203ENST00000376061 NLRP4Q96MN2 994 aa11.47□□□□□ -0.57
PDPN-203ENST00000376061 MAP7D2Q96T17 732 aa11.47□□□□□ -0.57
PDPN-203ENST00000376061 CCDC113Q9H0I3 377 aa11.47□□□□□ -0.57
PDPN-203ENST00000376061 DMAC2Q9NW81 257 aa11.47□□□□□ -0.57
PDPN-203ENST00000376061 CGNQ9P2M7 1197 aaKnown RBP11.47□□□□□ -0.57
PDPN-203ENST00000376061 HDAC6Q9UBN7 1215 aa11.47□□□□□ -0.57
PDPN-203ENST00000376061 EXOC7Q9UPT5 735 aa11.47□□□□□ -0.57
PDPN-203ENST00000376061 BRCA2P51587 3418 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 A0A1B0GTH6 734 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 C17orf102A2RUQ5 167 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 ANKRD63C9JTQ0 380 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 CETN3O15182 167 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 ASAP2O43150 1006 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 CBFA2T2O43439 604 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 PIGRP01833 764 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 VTNP04004 478 aa11.46□□□□□ -0.57
PDPN-203ENST00000376061 SRGAP2CP0DJJ0 459 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms