RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 SORCS3Q9UPU3 1222 aa10.83□□□□□ -0.67
PTCH1-204ENST00000375290 LRCH1Q9Y2L9 728 aa10.83□□□□□ -0.67
PTCH1-204ENST00000375290 TBX3O15119 743 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 HIF1AQ16665 826 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 HORMAD1Q86X24 394 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 CDKL3Q8IVW4 592 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-204ENST00000375290 RNPC3Q96LT9 517 aaKnown RBP10.83□□□□□ -0.68
PTCH1-204ENST00000375290 P3H1Q32P28 736 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 SLC44A4Q53GD3 710 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 XKR9Q5GH70 373 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 DNAJC7Q99615 494 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 SYBUQ9NX95 663 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 TUBA8Q9NY65 449 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-204ENST00000375290 ADCY3O60266 1144 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 KDM1AO60341 852 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 UFL1O94874 794 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 CFBP00751 764 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 SERPINB3P29508 390 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 IFRD2Q12894 506 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-204ENST00000375290 BIRC2Q13490 618 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 MB21D2Q8IYB1 491 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-204ENST00000375290 L1RE1Q9UN81 338 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 PRDM1O75626 825 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 PLS1Q14651 629 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 C7orf25Q9BPX7 421 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 STX18Q9P2W9 335 aaKnown RBP10.83□□□□□ -0.68
PTCH1-204ENST00000375290 FHOD1Q9Y613 1164 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 TM9SF1O15321 606 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 SYF2O95926 243 aaKnown RBP10.83□□□□□ -0.68
PTCH1-204ENST00000375290 PGM1P36871 562 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 KNOP1Q1ED39 458 aaKnown RBP10.83□□□□□ -0.68
PTCH1-204ENST00000375290 PABPC3Q9H361 631 aaKnown RBP10.83□□□□□ -0.68
PTCH1-204ENST00000375290 PLAGL2Q9UPG8 496 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 GSTA4O15217 222 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 POLGP54098 1239 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-204ENST00000375290 PURAQ00577 322 aaKnown RBP10.83□□□□□ -0.68
PTCH1-204ENST00000375290 FAM9CQ8IZT9 166 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 STAMQ92783 540 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 PCDHB4Q9Y5E5 795 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 SLIT1O75093 1534 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 RTN2O75298 545 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 PYGLP06737 847 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 GABPAQ06546 454 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 TRMT5Q32P41 509 aaKnown RBP10.83□□□□□ -0.68
PTCH1-204ENST00000375290 FAM102BQ5T8I3 360 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 TTBK2Q6IQ55 1244 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 PCYOX1LQ8NBM8 494 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 FAR2Q96K12 515 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 STK33Q9BYT3 514 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 KRT75O95678 551 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 CNTFP26441 200 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 RASGRF1Q13972 1273 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 NAB2Q15742 525 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 PCNX4Q63HM2 1172 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 ZNF662Q6ZS27 426 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 USP38Q8NB14 1042 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 RAD54LQ92698 747 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 FAM167AQ96KS9 214 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 ASPSCR1Q9BZE9 553 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 FBXL5Q9UKA1 691 aa10.83□□□□□ -0.68
PTCH1-204ENST00000375290 TOMM70O94826 608 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 FAM160B2Q86V87 743 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 ZNF483Q8TF39 744 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-204ENST00000375290 CATSPER2Q96P56 530 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 PSMD3O43242 534 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 ACTRT1Q8TDG2 376 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 CENPTQ96BT3 561 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 NOD2Q9HC29 1040 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 ST7Q9NRC1 585 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 PARVAQ9NVD7 372 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 SMARCAL1Q9NZC9 954 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 ZBTB21Q9ULJ3 1066 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 A0A0A6YYK5 440 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-204ENST00000375290 TOM1L1O75674 476 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 TRPA1O75762 1119 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 DCAF4Q8WV16 495 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 ZMYND10O75800 440 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 NCF2P19878 526 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-204ENST00000375290 OCRLQ01968 901 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 KCNH2Q12809 1159 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 ANKRD13CQ8N6S4 541 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 ABCA6Q8N139 1617 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 MAP3K13O43283 966 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 MFSD14BQ5SR56 506 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 WDR24Q96S15 920 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 HNRNPH1P31943 449 aaKnown RBP10.82□□□□□ -0.68
PTCH1-204ENST00000375290 TRAPPC9Q96Q05 1148 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 UBE2TQ9NPD8 197 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-204ENST00000375290 NR3C1P04150 777 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 CXCR5P32302 372 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 SOX5P35711 763 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 SLC7A5Q01650 507 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 KCNB2Q92953 911 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 MAGEB18Q96M61 343 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 SRGAP2CP0DJJ0 459 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 CIITAP33076 1130 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 GRIN1Q05586 938 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 ACBD5Q5T8D3 534 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-204ENST00000375290 MIS18BP1Q6P0N0 1132 aa10.82□□□□□ -0.68
PTCH1-204ENST00000375290 CLEC4GQ6UXB4 293 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms