RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 FAM105AQ9NUU6 356 aa15.87■□□□□ 0.13
PTCH1-202ENST00000375271 TBC1D13Q9NVG8 400 aa15.87■□□□□ 0.13
PTCH1-202ENST00000375271 SUCLA2Q9P2R7 463 aaPredicted RBP15.87■□□□□ 0.13
PTCH1-202ENST00000375271 IRAK3Q9Y616 596 aa15.87■□□□□ 0.13
PTCH1-202ENST00000375271 MSH4O15457 936 aa15.86■□□□□ 0.13
PTCH1-202ENST00000375271 PRPF3O43395 683 aaKnown RBP15.86■□□□□ 0.13
PTCH1-202ENST00000375271 URODP06132 367 aa15.86■□□□□ 0.13
PTCH1-202ENST00000375271 ADSSL1Q8N142 457 aa15.86■□□□□ 0.13
PTCH1-202ENST00000375271 SLC26A6Q9BXS9 759 aa15.86■□□□□ 0.13
PTCH1-202ENST00000375271 UNC45AQ9H3U1 944 aa15.86■□□□□ 0.13
PTCH1-202ENST00000375271 NRDE2Q9H7Z3 1164 aa15.86■□□□□ 0.13
PTCH1-202ENST00000375271 SSX2IPQ9Y2D8 614 aa15.86■□□□□ 0.13
PTCH1-202ENST00000375271 PLXNA3P51805 1871 aa15.86■□□□□ 0.13
PTCH1-202ENST00000375271 DDX11L8A8MPP1 907 aa15.85■□□□□ 0.13
PTCH1-202ENST00000375271 GALTP07902 379 aa15.85■□□□□ 0.13
PTCH1-202ENST00000375271 GBP2P32456 591 aaPredicted RBP15.85■□□□□ 0.13
PTCH1-202ENST00000375271 USP11P51784 963 aa15.85■□□□□ 0.13
PTCH1-202ENST00000375271 PTPN14Q15678 1187 aa15.85■□□□□ 0.13
PTCH1-202ENST00000375271 UGCGQ16739 394 aa15.85■□□□□ 0.13
PTCH1-202ENST00000375271 KANK3Q6NY19 840 aa15.85■□□□□ 0.13
PTCH1-202ENST00000375271 BLOC1S2Q6QNY1 142 aa15.85■□□□□ 0.13
PTCH1-202ENST00000375271 Q6ZUG5 572 aa15.85■□□□□ 0.13
PTCH1-202ENST00000375271 GPR149Q86SP6 731 aa15.85■□□□□ 0.13
PTCH1-202ENST00000375271 TRIM22Q8IYM9 498 aa15.85■□□□□ 0.13
PTCH1-202ENST00000375271 SIX5Q8N196 739 aa15.85■□□□□ 0.13
PTCH1-202ENST00000375271 SLC7A3Q8WY07 619 aa15.85■□□□□ 0.13
PTCH1-202ENST00000375271 BRF1Q92994 677 aa15.85■□□□□ 0.13
PTCH1-202ENST00000375271 PHKBQ93100 1093 aa15.85■□□□□ 0.13
PTCH1-202ENST00000375271 KANSL3Q9P2N6 904 aa15.85■□□□□ 0.13
PTCH1-202ENST00000375271 WDR81Q562E7 1941 aa15.85■□□□□ 0.13
PTCH1-202ENST00000375271 PTPRZ1P23471 2315 aaPredicted RBP15.84■□□□□ 0.13
PTCH1-202ENST00000375271 C2CD2LO14523 706 aa15.84■□□□□ 0.13
PTCH1-202ENST00000375271 DKC1O60832 514 aaKnown RBP eCLIP15.84■□□□□ 0.13
PTCH1-202ENST00000375271 NR1I2O75469 434 aa15.84■□□□□ 0.13
PTCH1-202ENST00000375271 ALDH2P05091 517 aa15.84■□□□□ 0.13
PTCH1-202ENST00000375271 ADH1AP07327 375 aa15.84■□□□□ 0.13
PTCH1-202ENST00000375271 AOC1P19801 751 aa15.84■□□□□ 0.13
PTCH1-202ENST00000375271 ID4P47928 161 aa15.84■□□□□ 0.13
PTCH1-202ENST00000375271 SLC11A1P49279 550 aa15.84■□□□□ 0.13
PTCH1-202ENST00000375271 AK2P54819 239 aa15.84■□□□□ 0.13
PTCH1-202ENST00000375271 ADCK5Q3MIX3 580 aa15.84■□□□□ 0.13
PTCH1-202ENST00000375271 ERMP1Q7Z2K6 904 aa15.84■□□□□ 0.13
PTCH1-202ENST00000375271 TMEM173Q86WV6 379 aaPredicted RBP15.84■□□□□ 0.13
PTCH1-202ENST00000375271 EXOC8Q8IYI6 725 aa15.84■□□□□ 0.13
PTCH1-202ENST00000375271 SLC22A17Q8WUG5 538 aa15.84■□□□□ 0.13
PTCH1-202ENST00000375271 SLC5A5Q92911 643 aa15.84■□□□□ 0.13
PTCH1-202ENST00000375271 JAKMIP1Q96N16 626 aaKnown RBP15.84■□□□□ 0.13
PTCH1-202ENST00000375271 HINFPQ9BQA5 517 aa15.84■□□□□ 0.13
PTCH1-202ENST00000375271 TRAIPQ9BWF2 469 aa15.84■□□□□ 0.13
PTCH1-202ENST00000375271 RNF26Q9BY78 433 aaPredicted RBP15.84■□□□□ 0.13
PTCH1-202ENST00000375271 SLKQ9H2G2 1235 aaPredicted RBP15.84■□□□□ 0.13
PTCH1-202ENST00000375271 RSAD1Q9HA92 442 aa15.84■□□□□ 0.13
PTCH1-202ENST00000375271 FAM217BQ9NTX9 383 aaPredicted RBP15.84■□□□□ 0.13
PTCH1-202ENST00000375271 VPS54Q9P1Q0 977 aa15.84■□□□□ 0.13
PTCH1-202ENST00000375271 IGSF9Q9P2J2 1179 aa15.84■□□□□ 0.13
PTCH1-202ENST00000375271 DUSP12Q9UNI6 340 aa15.84■□□□□ 0.13
PTCH1-202ENST00000375271 FAN1Q9Y2M0 1017 aa15.84■□□□□ 0.13
PTCH1-202ENST00000375271 MYO15AQ9UKN7 3530 aa15.84■□□□□ 0.13
PTCH1-202ENST00000375271 MARCH6O60337 910 aa15.83■□□□□ 0.12
PTCH1-202ENST00000375271 NCBP1Q09161 790 aaKnown RBP15.83■□□□□ 0.12
PTCH1-202ENST00000375271 DRP2Q13474 957 aa15.83■□□□□ 0.12
PTCH1-202ENST00000375271 ANGPT1Q15389 498 aa15.83■□□□□ 0.12
PTCH1-202ENST00000375271 LETM2Q2VYF4 491 aa15.83■□□□□ 0.12
PTCH1-202ENST00000375271 TSGA10IPQ3SY00 556 aa15.83■□□□□ 0.12
PTCH1-202ENST00000375271 BMP2KLQ5H9B9 411 aa15.83■□□□□ 0.12
PTCH1-202ENST00000375271 C15orf39Q6ZRI6 1047 aa15.83■□□□□ 0.12
PTCH1-202ENST00000375271 CCDC105Q8IYK2 499 aa15.83■□□□□ 0.12
PTCH1-202ENST00000375271 TBCKQ8TEA7 893 aa15.83■□□□□ 0.12
PTCH1-202ENST00000375271 LENG9Q96B70 501 aa15.83■□□□□ 0.12
PTCH1-202ENST00000375271 NIFKQ9BYG3 293 aaKnown RBP15.83■□□□□ 0.12
PTCH1-202ENST00000375271 PIDD1Q9HB75 910 aa15.83■□□□□ 0.12
PTCH1-202ENST00000375271 DNAJB4Q9UDY4 337 aa15.83■□□□□ 0.12
PTCH1-202ENST00000375271 PCDHB2Q9Y5E7 798 aa15.83■□□□□ 0.12
PTCH1-202ENST00000375271 CNTNAP2Q9UHC6 1331 aa15.83■□□□□ 0.12
PTCH1-202ENST00000375271 CDC45O75419 566 aa15.82■□□□□ 0.12
PTCH1-202ENST00000375271 OFD1O75665 1012 aa15.82■□□□□ 0.12
PTCH1-202ENST00000375271 ERLIN2O94905 339 aa15.82■□□□□ 0.12
PTCH1-202ENST00000375271 CLCN4P51793 760 aa15.82■□□□□ 0.12
PTCH1-202ENST00000375271 PSMC5P62195 406 aa15.82■□□□□ 0.12
PTCH1-202ENST00000375271 TARBP2Q15633 366 aaKnown RBP15.82■□□□□ 0.12
PTCH1-202ENST00000375271 CWF19L1Q69YN2 538 aaKnown RBP15.82■□□□□ 0.12
PTCH1-202ENST00000375271 RASEFQ8IZ41 740 aa15.82■□□□□ 0.12
PTCH1-202ENST00000375271 DTWD2Q8NBA8 298 aa15.82■□□□□ 0.12
PTCH1-202ENST00000375271 KLHL5Q96PQ7 755 aa15.82■□□□□ 0.12
PTCH1-202ENST00000375271 SH2D3AQ9BRG2 576 aa15.82■□□□□ 0.12
PTCH1-202ENST00000375271 TMEM175Q9BSA9 504 aa15.82■□□□□ 0.12
PTCH1-202ENST00000375271 KCNK12Q9HB15 430 aa15.82■□□□□ 0.12
PTCH1-202ENST00000375271 UBN1Q9NPG3 1134 aa15.82■□□□□ 0.12
PTCH1-202ENST00000375271 MAN1C1Q9NR34 630 aa15.82■□□□□ 0.12
PTCH1-202ENST00000375271 COL4A3BPQ9Y5P4 624 aa15.82■□□□□ 0.12
PTCH1-202ENST00000375271 TMEM150BA6NC51 233 aa15.81■□□□□ 0.12
PTCH1-202ENST00000375271 CPLX1O14810 134 aa15.81■□□□□ 0.12
PTCH1-202ENST00000375271 ZNF623O75123 536 aa15.81■□□□□ 0.12
PTCH1-202ENST00000375271 MAFO75444 373 aaPredicted RBP15.81■□□□□ 0.12
PTCH1-202ENST00000375271 GLUD1P00367 558 aa15.81■□□□□ 0.12
PTCH1-202ENST00000375271 CFHP08603 1231 aa15.81■□□□□ 0.12
PTCH1-202ENST00000375271 CNPP09543 421 aaKnown RBP15.81■□□□□ 0.12
PTCH1-202ENST00000375271 OR1G1P47890 313 aa15.81■□□□□ 0.12
PTCH1-202ENST00000375271 ZC3H14Q6PJT7 736 aaKnown RBP15.81■□□□□ 0.12
PTCH1-202ENST00000375271 DENND4AQ7Z401 1863 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms